RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 NUDCD3Q8IVD9 361 aa15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 TEX9Q8N6V9 391 aa15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 CATSPER1Q8NEC5 780 aa15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 COG1Q8WTW3 980 aa15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 DYNLL2Q96FJ2 89 aa15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 ADAM22Q9P0K1 906 aa15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 PRDM15P57071 1507 aaPredicted RBP15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 UNC13AQ9UPW8 1703 aa15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 LRIG3Q6UXM1 1119 aa15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 LAMC1P11047 1609 aa15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 PPP1R12AO14974 1030 aaPredicted RBP15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 AP3B2Q13367 1082 aa15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 PFKFB3Q16875 520 aaPredicted RBP15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 VPS39Q96JC1 886 aa15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 EPC1Q9H2F5 836 aa15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 DCTN4Q9UJW0 460 aa15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 RFX7Q2KHR2 1363 aa15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 MYO5CQ9NQX4 1742 aa15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 F8W8V4 182 aa15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 CCDC22O60826 627 aa15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 SASH1O94885 1247 aa15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 SYF2O95926 243 aaKnown RBP15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 ZNF18P17022 549 aa15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 CRKLP46109 303 aaKnown RBP15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 FRA10AC1Q70Z53 315 aa15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 ZNF473Q8WTR7 871 aaKnown RBP15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 SCG3Q8WXD2 468 aaKnown RBP15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 GFM2Q969S9 779 aaKnown RBP15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 PRMT1Q99873 361 aaKnown RBP15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 USP17L3A6NCW0 530 aa15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 USP17L4A6NCW7 530 aa15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 ZRANB2O95218 330 aaKnown RBP eCLIP15.5■□□□□ 0.076e-6■■■■□ 21
CSNK1D-217ENST00000581241 GDF11O95390 407 aa15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 NPR1P16066 1061 aa15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 CCDC92Q53HC0 331 aaPredicted RBP15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 ARMCX2Q7L311 632 aa15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 USP17L1Q7RTZ2 530 aa15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 VIPAS39Q9H9C1 493 aa15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 MLXIPLQ9NP71 852 aa15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 SAMD9Q5K651 1589 aa15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 PVALEFA0A1B0GWK0 134 aa15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 CLEC17AQ6ZS10 378 aa15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 NOP9Q86U38 636 aaKnown RBP15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 CDC26Q8NHZ8 85 aa15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 DDX56Q9NY93 547 aaKnown RBP15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 FBXL5Q9UKA1 691 aa15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 SLC13A4Q9UKG4 626 aa15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 ATICP31939 592 aa15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 RARS2Q5T160 578 aaKnown RBP15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 INTS2Q9H0H0 1204 aaKnown RBP15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 ALDH8A1Q9H2A2 487 aaPredicted RBP15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 KIF17Q9P2E2 1029 aa15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 IP6K2Q9UHH9 426 aa15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 PI4K2BG5E9Z4 385 aa15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 KRT14P02533 472 aa15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 MDH1P40925 334 aaKnown RBP15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 NEK2P51955 445 aa15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 PI16Q6UXB8 463 aa15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 BRIP1Q9BX63 1249 aa15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 ADD3Q9UEY8 706 aaKnown RBP15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 ZFXP17010 805 aaPredicted RBP15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 MECOMQ03112 1051 aa15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 NSUN2Q08J23 767 aaKnown RBP eCLIP15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 LRRC14Q15048 493 aa15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.5■□□□□ 0.07
CSNK1D-217ENST00000581241 SNX2O60749 519 aa15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 KCNH2Q12809 1159 aa15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 ORC2Q13416 577 aaPredicted RBP15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 TFDP2Q14188 446 aa15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 KCTD2Q14681 263 aa15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 VPS11Q9H270 941 aa15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 A0A1W2PQC6 194 aa15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 ESYT3A0FGR9 886 aa15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 SMARCA1P28370 1054 aa15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 CYP2C19P33261 490 aa15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 GUCY1A3Q02108 690 aa15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 HABP4Q5JVS0 413 aaKnown RBP15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 SFR1Q86XK3 245 aa15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 DCAF4Q8WV16 495 aa15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 ZCCHC17Q9NP64 241 aaKnown RBP15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 CYP2D7A0A087X1C5 515 aa15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 STXBP3O00186 592 aa15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 ANXA13P27216 316 aa15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 IL6STP40189 918 aaPredicted RBP15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 CDK8P49336 464 aa15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 JAK3P52333 1124 aa15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 OSTNP61366 133 aa15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 ZNF211Q13398 564 aaPredicted RBP15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 USPL1Q5W0Q7 1092 aa15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 CYB5R4Q7L1T6 521 aa15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 SPATA21Q7Z572 469 aa15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 STAMBPL1Q96FJ0 436 aa15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 DHX36Q9H2U1 1008 aaKnown RBP15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 SEC31BQ9NQW1 1179 aa15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 SFI1A8K8P3 1242 aa15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 MEFVO15553 781 aaPredicted RBP15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 CASP1P29466 404 aa15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 EPHB1P54762 984 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms