RNA–Protein interactions for RNA: ENST00000581055.1

TOP2A-205, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 4

Gene TOP2A, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-205ENST00000581055 CDK5RAP3Q96JB5 506 aa20.16■□□□□ 0.82
TOP2A-205ENST00000581055 ZBED2Q9BTP6 218 aa20.16■□□□□ 0.82
TOP2A-205ENST00000581055 BMP2KQ9NSY1 1161 aaPredicted RBP20.16■□□□□ 0.82
TOP2A-205ENST00000581055 ST3GAL5Q9UNP4 418 aa20.16■□□□□ 0.82
TOP2A-205ENST00000581055 PCDHA11Q9Y5I1 949 aa20.16■□□□□ 0.82
TOP2A-205ENST00000581055 COL4A3BPQ9Y5P4 624 aa20.16■□□□□ 0.82
TOP2A-205ENST00000581055 MORC2Q9Y6X9 1032 aaPredicted RBP20.16■□□□□ 0.82
TOP2A-205ENST00000581055 TRIP12Q14669 1992 aaPredicted RBP20.15■□□□□ 0.82
TOP2A-205ENST00000581055 USO1O60763 962 aaKnown RBP20.15■□□□□ 0.82
TOP2A-205ENST00000581055 DNAJB2P25686 324 aa20.15■□□□□ 0.82
TOP2A-205ENST00000581055 DEFB103AP81534 67 aa20.15■□□□□ 0.82
TOP2A-205ENST00000581055 ZRSR1Q15695 479 aaKnown RBP20.15■□□□□ 0.82
TOP2A-205ENST00000581055 ECM1Q16610 540 aa20.15■□□□□ 0.82
TOP2A-205ENST00000581055 PADI6Q6TGC4 694 aa20.15■□□□□ 0.82
TOP2A-205ENST00000581055 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.15■□□□□ 0.82
TOP2A-205ENST00000581055 MYOCDQ8IZQ8 938 aa20.15■□□□□ 0.82
TOP2A-205ENST00000581055 TIFAQ96CG3 184 aa20.15■□□□□ 0.82
TOP2A-205ENST00000581055 NLRP4Q96MN2 994 aa20.15■□□□□ 0.82
TOP2A-205ENST00000581055 USP28Q96RU2 1077 aa20.15■□□□□ 0.82
TOP2A-205ENST00000581055 MMTAG2Q9BU76 263 aaKnown RBP20.15■□□□□ 0.82
TOP2A-205ENST00000581055 PBX4Q9BYU1 374 aa20.15■□□□□ 0.82
TOP2A-205ENST00000581055 ERVK-5Q9HDB9 667 aa20.15■□□□□ 0.82
TOP2A-205ENST00000581055 KAT6AQ92794 2004 aa20.15■□□□□ 0.82
TOP2A-205ENST00000581055 TMEM265A0A087WTH1 108 aa20.14■□□□□ 0.81
TOP2A-205ENST00000581055 A0A087WZ62 844 aa20.14■□□□□ 0.81
TOP2A-205ENST00000581055 ENPP3O14638 875 aa20.14■□□□□ 0.81
TOP2A-205ENST00000581055 NASPP49321 788 aaPredicted RBP20.14■□□□□ 0.81
TOP2A-205ENST00000581055 LAMTOR4Q0VGL1 99 aa20.14■□□□□ 0.81
TOP2A-205ENST00000581055 TFDP1Q14186 410 aa20.14■□□□□ 0.81
TOP2A-205ENST00000581055 SLC39A14Q15043 492 aa20.14■□□□□ 0.81
TOP2A-205ENST00000581055 HYIQ5T013 277 aa20.14■□□□□ 0.81
TOP2A-205ENST00000581055 ZNF697Q5TEC3 545 aa20.14■□□□□ 0.81
TOP2A-205ENST00000581055 ATL3Q6DD88 541 aa20.14■□□□□ 0.81
TOP2A-205ENST00000581055 CABP7Q86V35 215 aa20.14■□□□□ 0.81
TOP2A-205ENST00000581055 CALML4Q96GE6 196 aa20.14■□□□□ 0.81
TOP2A-205ENST00000581055 ZNF668Q96K58 619 aaPredicted RBP20.14■□□□□ 0.81
TOP2A-205ENST00000581055 FDXACB1Q9BRP7 624 aaPredicted RBP20.14■□□□□ 0.81
TOP2A-205ENST00000581055 BHMT2Q9H2M3 363 aa20.14■□□□□ 0.81
TOP2A-205ENST00000581055 XPNPEP1Q9NQW7 623 aa20.14■□□□□ 0.81
TOP2A-205ENST00000581055 RNF216Q9NWF9 866 aaPredicted RBP20.14■□□□□ 0.81
TOP2A-205ENST00000581055 SRPRBQ9Y5M8 271 aaKnown RBP20.14■□□□□ 0.81
TOP2A-205ENST00000581055 MYH9P35579 1960 aaKnown RBP20.14■□□□□ 0.81
TOP2A-205ENST00000581055 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.13■□□□□ 0.81
TOP2A-205ENST00000581055 DENND3A2RUS2 1198 aa20.13■□□□□ 0.81
TOP2A-205ENST00000581055 TLL1O43897 1013 aa20.13■□□□□ 0.81
TOP2A-205ENST00000581055 GJB5O95377 273 aa20.13■□□□□ 0.81
TOP2A-205ENST00000581055 EYA4O95677 639 aa20.13■□□□□ 0.81
TOP2A-205ENST00000581055 SRGAP2CP0DJJ0 459 aa20.13■□□□□ 0.81
TOP2A-205ENST00000581055 CYP11B2P19099 503 aa20.13■□□□□ 0.81
TOP2A-205ENST00000581055 SFPQP23246 707 aaKnown RBP eCLIP20.13■□□□□ 0.81
TOP2A-205ENST00000581055 MARCKSP29966 332 aaPredicted RBP20.13■□□□□ 0.81
TOP2A-205ENST00000581055 RABGGTBP53611 331 aa20.13■□□□□ 0.81
TOP2A-205ENST00000581055 STK38Q15208 465 aa20.13■□□□□ 0.81
TOP2A-205ENST00000581055 FAM228AQ86W67 206 aa20.13■□□□□ 0.81
TOP2A-205ENST00000581055 KSR1Q8IVT5 923 aa20.13■□□□□ 0.81
TOP2A-205ENST00000581055 RASSF8Q8NHQ8 419 aa20.13■□□□□ 0.81
TOP2A-205ENST00000581055 TSPYL2Q9H2G4 693 aaPredicted RBP20.13■□□□□ 0.81
TOP2A-205ENST00000581055 LAMA3Q16787 3333 aa20.12■□□□□ 0.81
TOP2A-205ENST00000581055 ARL2P36404 184 aa20.12■□□□□ 0.81
TOP2A-205ENST00000581055 PBX2P40425 430 aa20.12■□□□□ 0.81
TOP2A-205ENST00000581055 PHKA2P46019 1235 aa20.12■□□□□ 0.81
TOP2A-205ENST00000581055 PKP1Q13835 747 aa20.12■□□□□ 0.81
TOP2A-205ENST00000581055 SRGAP1Q7Z6B7 1085 aa20.12■□□□□ 0.81
TOP2A-205ENST00000581055 KRI1Q8N9T8 703 aaKnown RBP20.12■□□□□ 0.81
TOP2A-205ENST00000581055 TOP1MTQ969P6 601 aa20.12■□□□□ 0.81
TOP2A-205ENST00000581055 RAD9AQ99638 391 aa20.12■□□□□ 0.81
TOP2A-205ENST00000581055 POLR3FQ9H1D9 316 aaPredicted RBP20.12■□□□□ 0.81
TOP2A-205ENST00000581055 TMX1Q9H3N1 280 aa20.12■□□□□ 0.81
TOP2A-205ENST00000581055 SLC28A3Q9HAS3 691 aa20.12■□□□□ 0.81
TOP2A-205ENST00000581055 C1orf112Q9NSG2 853 aa20.12■□□□□ 0.81
TOP2A-205ENST00000581055 FBXO2Q9UK22 296 aaPredicted RBP20.12■□□□□ 0.81
TOP2A-205ENST00000581055 SCN5AQ14524 2016 aa20.12■□□□□ 0.81
TOP2A-205ENST00000581055 E9PMD0 336 aa20.11■□□□□ 0.81
TOP2A-205ENST00000581055 YEATS4O95619 227 aa20.11■□□□□ 0.81
TOP2A-205ENST00000581055 ZSCAN20P17040 1043 aaPredicted RBP20.11■□□□□ 0.81
TOP2A-205ENST00000581055 TXLNAP40222 546 aa20.11■□□□□ 0.81
TOP2A-205ENST00000581055 POU5F1BQ06416 359 aa20.11■□□□□ 0.81
TOP2A-205ENST00000581055 FAM102BQ5T8I3 360 aa20.11■□□□□ 0.81
TOP2A-205ENST00000581055 DEFB123Q8N688 67 aa20.11■□□□□ 0.81
TOP2A-205ENST00000581055 RNF149Q8NC42 400 aa20.11■□□□□ 0.81
TOP2A-205ENST00000581055 LINC00301Q8NCQ3 95 aa20.11■□□□□ 0.81
TOP2A-205ENST00000581055 CSRNP2Q9H175 543 aa20.11■□□□□ 0.81
TOP2A-205ENST00000581055 IFT122Q9HBG6 1241 aa20.11■□□□□ 0.81
TOP2A-205ENST00000581055 TFIP11Q9UBB9 837 aaKnown RBP20.11■□□□□ 0.81
TOP2A-205ENST00000581055 CFAP45Q9UL16 551 aa20.11■□□□□ 0.81
TOP2A-205ENST00000581055 INSL6Q9Y581 213 aa20.11■□□□□ 0.81
TOP2A-205ENST00000581055 BRD1O95696 1058 aa20.1■□□□□ 0.81
TOP2A-205ENST00000581055 STAG3L1P0CL83 205 aa20.1■□□□□ 0.81
TOP2A-205ENST00000581055 GRIN1Q05586 938 aa20.1■□□□□ 0.81
TOP2A-205ENST00000581055 GRB10Q13322 594 aa20.1■□□□□ 0.81
TOP2A-205ENST00000581055 PCBP1Q15365 356 aaKnown RBP eCLIP20.1■□□□□ 0.81
TOP2A-205ENST00000581055 TMEM119Q4V9L6 283 aa20.1■□□□□ 0.81
TOP2A-205ENST00000581055 FAM117BQ6P1L5 589 aa20.1■□□□□ 0.81
TOP2A-205ENST00000581055 MAEAQ7L5Y9 396 aa20.1■□□□□ 0.81
TOP2A-205ENST00000581055 TMCO2Q7Z6W1 182 aaPredicted RBP20.1■□□□□ 0.81
TOP2A-205ENST00000581055 PNMA5Q96PV4 448 aa20.1■□□□□ 0.81
TOP2A-205ENST00000581055 ADAM2Q99965 735 aa20.1■□□□□ 0.81
TOP2A-205ENST00000581055 CCSER1Q9C0I3 900 aa20.1■□□□□ 0.81
TOP2A-205ENST00000581055 NKX2-4Q9H2Z4 354 aa20.1■□□□□ 0.81
TOP2A-205ENST00000581055 CHST12Q9NRB3 414 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms