RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 RASGRP4Q8TDF6 673 aa15.09■□□□□ 0.01
TRAF4-214ENST00000580073 MRPS27Q92552 414 aaKnown RBP15.09■□□□□ 0.01
TRAF4-214ENST00000580073 ZNF558Q96NG5 402 aa15.09■□□□□ 0.01
TRAF4-214ENST00000580073 TBC1D32Q96NH3 1257 aa15.09■□□□□ 0.01
TRAF4-214ENST00000580073 RNF26Q9BY78 433 aaPredicted RBP15.09■□□□□ 0.01
TRAF4-214ENST00000580073 NRBP2Q9NSY0 501 aa15.09■□□□□ 0.01
TRAF4-214ENST00000580073 GABBR1Q9UBS5 961 aa15.09■□□□□ 0.01
TRAF4-214ENST00000580073 ZBTB42B2RXF5 422 aa15.08■□□□□ 0
TRAF4-214ENST00000580073 RBAK-RBAKDNI3L0D1 243 aa15.08■□□□□ 0
TRAF4-214ENST00000580073 PRPF3O43395 683 aaKnown RBP15.08■□□□□ 0
TRAF4-214ENST00000580073 EIF5BO60841 1220 aaKnown RBP15.08■□□□□ 0
TRAF4-214ENST00000580073 GAS7O60861 476 aa15.08■□□□□ 0
TRAF4-214ENST00000580073 VTNP04004 478 aa15.08■□□□□ 0
TRAF4-214ENST00000580073 OATP04181 439 aa15.08■□□□□ 0
TRAF4-214ENST00000580073 HOXB8P17481 243 aaPredicted RBP15.08■□□□□ 0
TRAF4-214ENST00000580073 CIITAP33076 1130 aa15.08■□□□□ 0
TRAF4-214ENST00000580073 AK2P54819 239 aa15.08■□□□□ 0
TRAF4-214ENST00000580073 CBX2Q14781 532 aaPredicted RBP15.08■□□□□ 0
TRAF4-214ENST00000580073 ALYREFQ86V81 257 aaKnown RBP15.08■□□□□ 0
TRAF4-214ENST00000580073 RDM1Q8NG50 284 aa15.08■□□□□ 0
TRAF4-214ENST00000580073 CASP10Q92851 521 aa15.08■□□□□ 0
TRAF4-214ENST00000580073 FBXL18Q96ME1 805 aa15.08■□□□□ 0
TRAF4-214ENST00000580073 PPP1R16BQ96T49 567 aa15.08■□□□□ 0
TRAF4-214ENST00000580073 TYW1Q9NV66 732 aaKnown RBP15.08■□□□□ 0
TRAF4-214ENST00000580073 NR2E1Q9Y466 385 aa15.08■□□□□ 0
TRAF4-214ENST00000580073 DENND4AQ7Z401 1863 aa15.08■□□□□ 0
TRAF4-214ENST00000580073 TMEM221A6NGB7 291 aa15.07■□□□□ 0
TRAF4-214ENST00000580073 M0R296 226 aa15.07■□□□□ 0
TRAF4-214ENST00000580073 FSCN2O14926 492 aa15.07■□□□□ 0
TRAF4-214ENST00000580073 DTNBO60941 627 aa15.07■□□□□ 0
TRAF4-214ENST00000580073 GPR32O75388 356 aa15.07■□□□□ 0
TRAF4-214ENST00000580073 EIF4BP23588 611 aaKnown RBP15.07■□□□□ 0
TRAF4-214ENST00000580073 PDIA3P30101 505 aaKnown RBP15.07■□□□□ 0
TRAF4-214ENST00000580073 ADD1P35611 737 aaKnown RBP15.07■□□□□ 0
TRAF4-214ENST00000580073 MRE11P49959 708 aa15.07■□□□□ 0
TRAF4-214ENST00000580073 CLCN3P51790 818 aa15.07■□□□□ 0
TRAF4-214ENST00000580073 PTPN5P54829 565 aa15.07■□□□□ 0
TRAF4-214ENST00000580073 FAM189BP81408 668 aa15.07■□□□□ 0
TRAF4-214ENST00000580073 PRKCEQ02156 737 aa15.07■□□□□ 0
TRAF4-214ENST00000580073 SIGLEC14Q08ET2 396 aa15.07■□□□□ 0
TRAF4-214ENST00000580073 TBC1D8BQ0IIM8 1120 aa15.07■□□□□ 0
TRAF4-214ENST00000580073 TPRNQ4KMQ1 711 aa15.07■□□□□ 0
TRAF4-214ENST00000580073 FAM102BQ5T8I3 360 aa15.07■□□□□ 0
TRAF4-214ENST00000580073 PLPP4Q5VZY2 271 aa15.07■□□□□ 0
TRAF4-214ENST00000580073 EFCAB12Q6NXP0 572 aa15.07■□□□□ 0
TRAF4-214ENST00000580073 TRIM67Q6ZTA4 783 aa15.07■□□□□ 0
TRAF4-214ENST00000580073 TRIM22Q8IYM9 498 aa15.07■□□□□ 0
TRAF4-214ENST00000580073 RIT2Q99578 217 aa15.07■□□□□ 0
TRAF4-214ENST00000580073 TCF25Q9BQ70 676 aa15.07■□□□□ 0
TRAF4-214ENST00000580073 TEKT3Q9BXF9 490 aa15.07■□□□□ 0
TRAF4-214ENST00000580073 IRF2BPLQ9H1B7 796 aa15.07■□□□□ 0
TRAF4-214ENST00000580073 TPCN1Q9ULQ1 816 aa15.07■□□□□ 0
TRAF4-214ENST00000580073 LARGE1O95461 756 aa15.06■□□□□ 0
TRAF4-214ENST00000580073 EOMESO95936 686 aa15.06■□□□□ 0
TRAF4-214ENST00000580073 FGFR1P11362 822 aa15.06■□□□□ 0
TRAF4-214ENST00000580073 SKIP12755 728 aa15.06■□□□□ 0
TRAF4-214ENST00000580073 DNM2P50570 870 aa15.06■□□□□ 0
TRAF4-214ENST00000580073 USP11P51784 963 aa15.06■□□□□ 0
TRAF4-214ENST00000580073 NEK4P51957 841 aa15.06■□□□□ 0
TRAF4-214ENST00000580073 NLRP11P59045 1033 aaKnown RBP15.06■□□□□ 0
TRAF4-214ENST00000580073 ZXDAP98168 799 aa15.06■□□□□ 0
TRAF4-214ENST00000580073 DSC3Q14574 896 aa15.06■□□□□ 0
TRAF4-214ENST00000580073 SMC1AQ14683 1233 aaKnown RBP15.06■□□□□ 0
TRAF4-214ENST00000580073 KCNT2Q6UVM3 1135 aa15.06■□□□□ 0
TRAF4-214ENST00000580073 TMEM184AQ6ZMB5 413 aa15.06■□□□□ 0
TRAF4-214ENST00000580073 FAM177A1Q8N128 213 aaPredicted RBP15.06■□□□□ 0
TRAF4-214ENST00000580073 SUSD6Q92537 303 aa15.06■□□□□ 0
TRAF4-214ENST00000580073 PBXIP1Q96AQ6 731 aa15.06■□□□□ 0
TRAF4-214ENST00000580073 NECTIN4Q96NY8 510 aa15.06■□□□□ 0
TRAF4-214ENST00000580073 CWH43Q9H720 699 aa15.06■□□□□ 0
TRAF4-214ENST00000580073 NCOA5Q9HCD5 579 aaKnown RBP15.06■□□□□ 0
TRAF4-214ENST00000580073 SH3GLB2Q9NR46 395 aa15.06■□□□□ 0
TRAF4-214ENST00000580073 DISC1Q9NRI5 854 aa15.06■□□□□ 0
TRAF4-214ENST00000580073 SPG21Q9NZD8 308 aa15.06■□□□□ 0
TRAF4-214ENST00000580073 TDRD15B5MCY1 1934 aaKnown RBP15.05■□□□□ 0
TRAF4-214ENST00000580073 ATP4AP20648 1035 aa15.05■□□□□ -0
TRAF4-214ENST00000580073 SFPQP23246 707 aaKnown RBP eCLIP15.05■□□□□ -0
TRAF4-214ENST00000580073 TECP42680 631 aa15.05■□□□□ -0
TRAF4-214ENST00000580073 GIT2Q14161 759 aa15.05■□□□□ -0
TRAF4-214ENST00000580073 LRCH2Q5VUJ6 765 aa15.05■□□□□ -0
TRAF4-214ENST00000580073 CES5AQ6NT32 575 aa15.05■□□□□ -0
TRAF4-214ENST00000580073 ANKRD54Q6NXT1 300 aa15.05■□□□□ -0
TRAF4-214ENST00000580073 TRMT1LQ7Z2T5 733 aaKnown RBP15.05■□□□□ -0
TRAF4-214ENST00000580073 ZBTB33Q86T24 672 aa15.05■□□□□ -0
TRAF4-214ENST00000580073 ECHDC2Q86YB7 292 aa15.05■□□□□ -0
TRAF4-214ENST00000580073 TMEM87AQ8NBN3 555 aa15.05■□□□□ -0
TRAF4-214ENST00000580073 NLRP7Q8WX94 980 aa15.05■□□□□ -0
TRAF4-214ENST00000580073 RPGRIP1Q96KN7 1286 aa15.05■□□□□ -0
TRAF4-214ENST00000580073 JPH2Q9BR39 696 aaPredicted RBP15.05■□□□□ -0
TRAF4-214ENST00000580073 INO80BQ9C086 356 aaPredicted RBP15.05■□□□□ -0
TRAF4-214ENST00000580073 CDHR5Q9HBB8 845 aa15.05■□□□□ -0
TRAF4-214ENST00000580073 STK39Q9UEW8 545 aa15.05■□□□□ -0
TRAF4-214ENST00000580073 PER2O15055 1255 aa15.04■□□□□ -0
TRAF4-214ENST00000580073 CD2BP2O95400 341 aaKnown RBP15.04■□□□□ -0
TRAF4-214ENST00000580073 GPC3P51654 580 aa15.04■□□□□ -0
TRAF4-214ENST00000580073 CCT2P78371 535 aaKnown RBP15.04■□□□□ -0
TRAF4-214ENST00000580073 ST3GAL1Q11201 340 aa15.04■□□□□ -0
TRAF4-214ENST00000580073 NTRK3Q16288 839 aa15.04■□□□□ -0
TRAF4-214ENST00000580073 TMC7Q7Z402 723 aa15.04■□□□□ -0
TRAF4-214ENST00000580073 LRRC71Q8N4P6 559 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms