RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 HIDE1A8MVS5 230 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 LOC730098B7Z3J9 87 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 M0R296 226 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 CHMP2AO43633 222 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 ZNF862O60290 1169 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 C22orf31O95567 290 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 EYA4O95677 639 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 CXCL14O95715 111 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 PDGFBP01127 241 aaPredicted RBP4.35□□□□□ -1.71
NUP85-209ENST00000578987 PSAPP07602 524 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 CYP3A4P08684 503 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 WEE2P0C1S8 567 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 MYBP10242 640 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 ZSCAN20P17040 1043 aaPredicted RBP4.35□□□□□ -1.71
NUP85-209ENST00000578987 CA8P35219 290 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 METAP2P50579 478 aaKnown RBP eCLIP4.35□□□□□ -1.71
NUP85-209ENST00000578987 ZXDAP98168 799 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 COASYQ13057 564 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 DRP2Q13474 957 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 DSC3Q14574 896 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 UGCGQ16739 394 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 PFKFB3Q16875 520 aaPredicted RBP4.35□□□□□ -1.71
NUP85-209ENST00000578987 TSGA10IPQ3SY00 556 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 HERC4Q5GLZ8 1057 aaPredicted RBP4.35□□□□□ -1.71
NUP85-209ENST00000578987 CLLU1OSQ5K130 101 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 RNF20Q5VTR2 975 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 KCNT2Q6UVM3 1135 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 TRIM67Q6ZTA4 783 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 SLC24A5Q71RS6 500 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 NIPA1Q7RTP0 329 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 ECHDC2Q86YB7 292 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 GPIHBP1Q8IV16 184 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 KSR1Q8IVT5 923 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 C12orf76Q8N812 135 aaPredicted RBP4.35□□□□□ -1.71
NUP85-209ENST00000578987 SMRP1Q8NCR6 262 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 PRSS33Q8NF86 280 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 ATP8B4Q8TF62 1192 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 CRYGNQ8WXF5 182 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 BRF1Q92994 677 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 MFSD14AQ96MC6 490 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 JAKMIP1Q96N16 626 aaKnown RBP4.35□□□□□ -1.71
NUP85-209ENST00000578987 CASD1Q96PB1 797 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 TCF25Q9BQ70 676 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 ZMYND12Q9H0C1 365 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 S1PR5Q9H228 398 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 ADAMTS10Q9H324 1103 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 UNC45AQ9H3U1 944 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 SMOC2Q9H3U7 446 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 NCOA5Q9HCD5 579 aaKnown RBP4.35□□□□□ -1.71
NUP85-209ENST00000578987 C6orf50Q9HD87 102 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 TLR9Q9NR96 1032 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 TBC1D22BQ9NU19 505 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 FAM86C1Q9NVL1 165 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 VPS54Q9P1Q0 977 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 AKT3Q9Y243 479 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 MAFBQ9Y5Q3 323 aaPredicted RBP4.35□□□□□ -1.71
NUP85-209ENST00000578987 SNX14Q9Y5W7 946 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 KDM3AQ9Y4C1 1321 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 WDFY4Q6ZS81 3184 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 COL1A2P08123 1366 aa4.35□□□□□ -1.71
NUP85-209ENST00000578987 MUC6Q6W4X9 2439 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 A0A087WZ62 844 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 MEIS3P2A8K0S8 358 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 DDX11L8A8MPP1 907 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 FSCN2O14926 492 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 MSH4O15457 936 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 PRPF3O43395 683 aaKnown RBP4.34□□□□□ -1.71
NUP85-209ENST00000578987 STBD1O95210 358 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 SLC26A2P50443 739 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 GPC3P51654 580 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 VCPP55072 806 aaKnown RBP4.34□□□□□ -1.71
NUP85-209ENST00000578987 NLRP5P59047 1200 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 AKAP17AQ02040 695 aaKnown RBP4.34□□□□□ -1.71
NUP85-209ENST00000578987 KRT17Q04695 432 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 STK3Q13188 491 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 AP3B2Q13367 1082 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 KCNC3Q14003 757 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 NTRK3Q16288 839 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 DUSP6Q16828 381 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 MTERF2Q49AM1 385 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 BMP2KLQ5H9B9 411 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 ODR4Q5SWX8 454 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 ZNF746Q6NUN9 644 aaPredicted RBP4.34□□□□□ -1.71
NUP85-209ENST00000578987 ANKRD54Q6NXT1 300 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 PPP1R18Q6NYC8 613 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 SYCE2Q6PIF2 218 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 BLOC1S2Q6QNY1 142 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 TMC7Q7Z402 723 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 REXO1Q8N1G1 1221 aaKnown RBP4.34□□□□□ -1.71
NUP85-209ENST00000578987 LINC01465Q8N7H1 131 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 ZNF579Q8NAF0 562 aaKnown RBP4.34□□□□□ -1.71
NUP85-209ENST00000578987 HELQQ8TDG4 1101 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 NLRP7Q8WX94 980 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 MRPS27Q92552 414 aaKnown RBP4.34□□□□□ -1.71
NUP85-209ENST00000578987 LPPQ93052 612 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 PPP2R3CQ969Q6 453 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 ZNF558Q96NG5 402 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 AIFM3Q96NN9 605 aa4.34□□□□□ -1.71
NUP85-209ENST00000578987 POP1Q99575 1024 aaKnown RBP4.34□□□□□ -1.71
NUP85-209ENST00000578987 FDXACB1Q9BRP7 624 aaPredicted RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms