RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 CKAP2LQ8IYA6 745 aa11.5□□□□□ -0.57
NPLOC4-220ENST00000576940 LRRC43Q8N309 656 aa11.5□□□□□ -0.57
NPLOC4-220ENST00000576940 TMTC2Q8N394 836 aa11.5□□□□□ -0.57
NPLOC4-220ENST00000576940 TDRD5Q8NAT2 981 aaKnown RBP11.5□□□□□ -0.57
NPLOC4-220ENST00000576940 FANCBQ8NB91 859 aa11.5□□□□□ -0.57
NPLOC4-220ENST00000576940 HELQQ8TDG4 1101 aa11.5□□□□□ -0.57
NPLOC4-220ENST00000576940 ANO3Q9BYT9 981 aa11.5□□□□□ -0.57
NPLOC4-220ENST00000576940 RIC8AQ9NPQ8 531 aa11.5□□□□□ -0.57
NPLOC4-220ENST00000576940 RBM8AQ9Y5S9 174 aaKnown RBP11.5□□□□□ -0.57
NPLOC4-220ENST00000576940 SLC12A7Q9Y666 1083 aa11.5□□□□□ -0.57
NPLOC4-220ENST00000576940 COL1A2P08123 1366 aa11.5□□□□□ -0.57
NPLOC4-220ENST00000576940 SMCO2A6NFE2 343 aa11.49□□□□□ -0.57
NPLOC4-220ENST00000576940 FAM86B1E9PN63 330 aa11.49□□□□□ -0.57
NPLOC4-220ENST00000576940 SGSM2O43147 1006 aa11.49□□□□□ -0.57
NPLOC4-220ENST00000576940 EOMESO95936 686 aa11.49□□□□□ -0.57
NPLOC4-220ENST00000576940 FAM86B2P0C5J1 330 aa11.49□□□□□ -0.57
NPLOC4-220ENST00000576940 MCM5P33992 734 aa11.49□□□□□ -0.57
NPLOC4-220ENST00000576940 NAPAP54920 295 aa11.49□□□□□ -0.57
NPLOC4-220ENST00000576940 BCAR1P56945 870 aa11.49□□□□□ -0.57
NPLOC4-220ENST00000576940 KIAA1841Q6NSI8 718 aa11.49□□□□□ -0.57
NPLOC4-220ENST00000576940 EFCAB12Q6NXP0 572 aa11.49□□□□□ -0.57
NPLOC4-220ENST00000576940 TMC5Q6UXY8 1006 aa11.49□□□□□ -0.57
NPLOC4-220ENST00000576940 TMEM173Q86WV6 379 aaPredicted RBP11.49□□□□□ -0.57
NPLOC4-220ENST00000576940 PLA2G4DQ86XP0 818 aa11.49□□□□□ -0.57
NPLOC4-220ENST00000576940 VPS52Q8N1B4 723 aa11.49□□□□□ -0.57
NPLOC4-220ENST00000576940 PLCD3Q8N3E9 789 aa11.49□□□□□ -0.57
NPLOC4-220ENST00000576940 LRRC71Q8N4P6 559 aa11.49□□□□□ -0.57
NPLOC4-220ENST00000576940 EXOC6Q8TAG9 804 aa11.49□□□□□ -0.57
NPLOC4-220ENST00000576940 BBXQ8WY36 941 aaPredicted RBP11.49□□□□□ -0.57
NPLOC4-220ENST00000576940 ADAMTS10Q9H324 1103 aa11.49□□□□□ -0.57
NPLOC4-220ENST00000576940 CYP26B1Q9NR63 512 aa11.49□□□□□ -0.57
NPLOC4-220ENST00000576940 AKT3Q9Y243 479 aa11.49□□□□□ -0.57
NPLOC4-220ENST00000576940 MAFBQ9Y5Q3 323 aaPredicted RBP11.49□□□□□ -0.57
NPLOC4-220ENST00000576940 A0A0U1RQF3 1178 aa11.48□□□□□ -0.57
NPLOC4-220ENST00000576940 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.48□□□□□ -0.57
NPLOC4-220ENST00000576940 CSDE1O75534 798 aaKnown RBP11.48□□□□□ -0.57
NPLOC4-220ENST00000576940 FOSP01100 380 aaPredicted RBP11.48□□□□□ -0.57
NPLOC4-220ENST00000576940 CALM1P0DP23 149 aa11.48□□□□□ -0.57
NPLOC4-220ENST00000576940 CALM2P0DP24 149 aa11.48□□□□□ -0.57
NPLOC4-220ENST00000576940 CALM3P0DP25 149 aa11.48□□□□□ -0.57
NPLOC4-220ENST00000576940 AOC1P19801 751 aa11.48□□□□□ -0.57
NPLOC4-220ENST00000576940 EIF4BP23588 611 aaKnown RBP11.48□□□□□ -0.57
NPLOC4-220ENST00000576940 LIFRP42702 1097 aa11.48□□□□□ -0.57
NPLOC4-220ENST00000576940 ALDH7A1P49419 539 aaKnown RBP11.48□□□□□ -0.57
NPLOC4-220ENST00000576940 AAMPQ13685 434 aa11.48□□□□□ -0.57
NPLOC4-220ENST00000576940 ANGPT1Q15389 498 aa11.48□□□□□ -0.57
NPLOC4-220ENST00000576940 LONRF3Q496Y0 759 aa11.48□□□□□ -0.57
NPLOC4-220ENST00000576940 JAKMIP3Q5VZ66 844 aa11.48□□□□□ -0.57
NPLOC4-220ENST00000576940 ZNF598Q86UK7 904 aaKnown RBP11.48□□□□□ -0.57
NPLOC4-220ENST00000576940 MICU3Q86XE3 530 aa11.48□□□□□ -0.57
NPLOC4-220ENST00000576940 TMEM87AQ8NBN3 555 aa11.48□□□□□ -0.57
NPLOC4-220ENST00000576940 SLC22A17Q8WUG5 538 aa11.48□□□□□ -0.57
NPLOC4-220ENST00000576940 TMEM169Q96HH4 297 aa11.48□□□□□ -0.57
NPLOC4-220ENST00000576940 TMEM87BQ96K49 555 aa11.48□□□□□ -0.57
NPLOC4-220ENST00000576940 MTA3Q9BTC8 594 aa11.48□□□□□ -0.57
NPLOC4-220ENST00000576940 ZBP1Q9H171 429 aa11.48□□□□□ -0.57
NPLOC4-220ENST00000576940 GABBR1Q9UBS5 961 aa11.48□□□□□ -0.57
NPLOC4-220ENST00000576940 USTQ9Y2C2 406 aa11.48□□□□□ -0.57
NPLOC4-220ENST00000576940 V9GY48 417 aaPredicted RBP11.48□□□□□ -0.57
NPLOC4-220ENST00000576940 WDR87Q6ZQQ6 2873 aa11.48□□□□□ -0.57
NPLOC4-220ENST00000576940 IPO5O00410 1097 aaKnown RBP11.47□□□□□ -0.57
NPLOC4-220ENST00000576940 ADAMTS3O15072 1205 aa11.47□□□□□ -0.57
NPLOC4-220ENST00000576940 SREBF1P36956 1147 aa11.47□□□□□ -0.57
NPLOC4-220ENST00000576940 CLK2P49760 499 aaKnown RBP11.47□□□□□ -0.57
NPLOC4-220ENST00000576940 ADCY7P51828 1080 aa11.47□□□□□ -0.57
NPLOC4-220ENST00000576940 TDGQ13569 410 aa11.47□□□□□ -0.57
NPLOC4-220ENST00000576940 BMS1Q14692 1282 aaKnown RBP11.47□□□□□ -0.57
NPLOC4-220ENST00000576940 CCDC105Q8IYK2 499 aa11.47□□□□□ -0.57
NPLOC4-220ENST00000576940 LINC01465Q8N7H1 131 aa11.47□□□□□ -0.57
NPLOC4-220ENST00000576940 DTWD2Q8NBA8 298 aa11.47□□□□□ -0.57
NPLOC4-220ENST00000576940 KCNG4Q8TDN1 519 aa11.47□□□□□ -0.57
NPLOC4-220ENST00000576940 KCNK12Q9HB15 430 aa11.47□□□□□ -0.57
NPLOC4-220ENST00000576940 GVINP1Q7Z2Y8 2422 aa11.47□□□□□ -0.57
NPLOC4-220ENST00000576940 CNTNAP5Q8WYK1 1306 aa11.46□□□□□ -0.57
NPLOC4-220ENST00000576940 IGLV3-22A0A075B6J6 115 aa11.46□□□□□ -0.57
NPLOC4-220ENST00000576940 MAGEB2O15479 319 aa11.46□□□□□ -0.57
NPLOC4-220ENST00000576940 NARSO43776 548 aaKnown RBP11.46□□□□□ -0.57
NPLOC4-220ENST00000576940 CTSAP10619 480 aa11.46□□□□□ -0.57
NPLOC4-220ENST00000576940 GPC3P51654 580 aa11.46□□□□□ -0.57
NPLOC4-220ENST00000576940 NIPA1Q7RTP0 329 aa11.46□□□□□ -0.57
NPLOC4-220ENST00000576940 GPR149Q86SP6 731 aa11.46□□□□□ -0.57
NPLOC4-220ENST00000576940 CABP7Q86V35 215 aa11.46□□□□□ -0.57
NPLOC4-220ENST00000576940 SIX5Q8N196 739 aa11.46□□□□□ -0.57
NPLOC4-220ENST00000576940 BCL7CQ8WUZ0 217 aaPredicted RBP11.46□□□□□ -0.57
NPLOC4-220ENST00000576940 LPPQ93052 612 aa11.46□□□□□ -0.57
NPLOC4-220ENST00000576940 ACSF2Q96CM8 615 aaPredicted RBP11.46□□□□□ -0.57
NPLOC4-220ENST00000576940 RMDN1Q96DB5 314 aa11.46□□□□□ -0.57
NPLOC4-220ENST00000576940 MAP7D2Q96T17 732 aa11.46□□□□□ -0.57
NPLOC4-220ENST00000576940 ZNF577Q9BSK1 485 aa11.46□□□□□ -0.57
NPLOC4-220ENST00000576940 NRDE2Q9H7Z3 1164 aa11.46□□□□□ -0.57
NPLOC4-220ENST00000576940 DZANK1Q9NVP4 752 aa11.46□□□□□ -0.57
NPLOC4-220ENST00000576940 FBXL21Q9UKT6 434 aa11.46□□□□□ -0.57
NPLOC4-220ENST00000576940 CEP131Q9UPN4 1083 aa11.46□□□□□ -0.57
NPLOC4-220ENST00000576940 PCDHA10Q9Y5I2 948 aa11.46□□□□□ -0.57
NPLOC4-220ENST00000576940 EP300Q09472 2414 aaPredicted RBP11.46□□□□□ -0.58
NPLOC4-220ENST00000576940 MED19A0JLT2 244 aaPredicted RBP11.45□□□□□ -0.58
NPLOC4-220ENST00000576940 MEIS3P2A8K0S8 358 aa11.45□□□□□ -0.58
NPLOC4-220ENST00000576940 STK25O00506 426 aa11.45□□□□□ -0.58
NPLOC4-220ENST00000576940 SLC27A2O14975 620 aa11.45□□□□□ -0.58
NPLOC4-220ENST00000576940 ZC3H11AO75152 810 aaKnown RBP eCLIP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms