RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 LRFN2Q9ULH4 789 aa13.36□□□□□ -0.27
LITAF-219ENST00000576334 PCDHB7Q9Y5E2 793 aa13.36□□□□□ -0.27
LITAF-219ENST00000576334 PCDHGC5Q9Y5F6 944 aa13.36□□□□□ -0.27
LITAF-219ENST00000576334 A0A087WZ62 844 aa13.35□□□□□ -0.27
LITAF-219ENST00000576334 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.35□□□□□ -0.27
LITAF-219ENST00000576334 IGKV6-21A0A0C4DH24 114 aa13.35□□□□□ -0.27
LITAF-219ENST00000576334 TBKBP1A7MCY6 615 aa13.35□□□□□ -0.27
LITAF-219ENST00000576334 H3BQ06 376 aaPredicted RBP13.35□□□□□ -0.27
LITAF-219ENST00000576334 TNFRSF10AO00220 468 aa13.35□□□□□ -0.27
LITAF-219ENST00000576334 MARCH6O60337 910 aa13.35□□□□□ -0.27
LITAF-219ENST00000576334 ITGB1P05556 798 aa13.35□□□□□ -0.27
LITAF-219ENST00000576334 ATP2B1P20020 1258 aa13.35□□□□□ -0.27
LITAF-219ENST00000576334 KCNA5P22460 613 aa13.35□□□□□ -0.27
LITAF-219ENST00000576334 EIF4BP23588 611 aaKnown RBP13.35□□□□□ -0.27
LITAF-219ENST00000576334 TMOD1P28289 359 aa13.35□□□□□ -0.27
LITAF-219ENST00000576334 IRS1P35568 1242 aa13.35□□□□□ -0.27
LITAF-219ENST00000576334 PSMC5P62195 406 aa13.35□□□□□ -0.27
LITAF-219ENST00000576334 EP400NLQ6ZTU2 488 aa13.35□□□□□ -0.27
LITAF-219ENST00000576334 SLC24A5Q71RS6 500 aa13.35□□□□□ -0.27
LITAF-219ENST00000576334 CMTR2Q8IYT2 770 aaKnown RBP13.35□□□□□ -0.27
LITAF-219ENST00000576334 KLHL23Q8NBE8 558 aa13.35□□□□□ -0.27
LITAF-219ENST00000576334 NLRP7Q8WX94 980 aa13.35□□□□□ -0.27
LITAF-219ENST00000576334 FAM20AQ96MK3 541 aa13.35□□□□□ -0.27
LITAF-219ENST00000576334 SCLT1Q96NL6 688 aa13.35□□□□□ -0.27
LITAF-219ENST00000576334 FDXACB1Q9BRP7 624 aaPredicted RBP13.35□□□□□ -0.27
LITAF-219ENST00000576334 UBE2ZQ9H832 354 aaPredicted RBP13.35□□□□□ -0.27
LITAF-219ENST00000576334 RNF19AQ9NV58 838 aa13.35□□□□□ -0.27
LITAF-219ENST00000576334 COG5Q9UP83 839 aa13.35□□□□□ -0.27
LITAF-219ENST00000576334 PLAGL2Q9UPG8 496 aa13.35□□□□□ -0.27
LITAF-219ENST00000576334 LIMCH1Q9UPQ0 1083 aa13.35□□□□□ -0.27
LITAF-219ENST00000576334 MAFO75444 373 aaPredicted RBP13.34□□□□□ -0.27
LITAF-219ENST00000576334 STAG3L1P0CL83 205 aa13.34□□□□□ -0.27
LITAF-219ENST00000576334 DARSP14868 501 aaKnown RBP13.34□□□□□ -0.27
LITAF-219ENST00000576334 GCFC2P16383 781 aaKnown RBP13.34□□□□□ -0.27
LITAF-219ENST00000576334 PBX3P40426 434 aa13.34□□□□□ -0.27
LITAF-219ENST00000576334 QARSP47897 775 aaKnown RBP13.34□□□□□ -0.27
LITAF-219ENST00000576334 FAM189BP81408 668 aa13.34□□□□□ -0.27
LITAF-219ENST00000576334 PTPROQ16827 1216 aa13.34□□□□□ -0.27
LITAF-219ENST00000576334 LONRF3Q496Y0 759 aa13.34□□□□□ -0.27
LITAF-219ENST00000576334 ADGRD2Q7Z7M1 963 aa13.34□□□□□ -0.27
LITAF-219ENST00000576334 RHPN2Q8IUC4 686 aa13.34□□□□□ -0.27
LITAF-219ENST00000576334 RNF169Q8NCN4 708 aa13.34□□□□□ -0.27
LITAF-219ENST00000576334 IL27Q8NEV9 243 aa13.34□□□□□ -0.27
LITAF-219ENST00000576334 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.34□□□□□ -0.27
LITAF-219ENST00000576334 SPPL3Q8TCT6 385 aa13.34□□□□□ -0.27
LITAF-219ENST00000576334 TMEM143Q96AN5 459 aa13.34□□□□□ -0.27
LITAF-219ENST00000576334 LXNQ9BS40 222 aa13.34□□□□□ -0.27
LITAF-219ENST00000576334 TMEM60Q9H2L4 133 aa13.34□□□□□ -0.27
LITAF-219ENST00000576334 CYP26B1Q9NR63 512 aa13.34□□□□□ -0.27
LITAF-219ENST00000576334 TYW1Q9NV66 732 aaKnown RBP13.34□□□□□ -0.27
LITAF-219ENST00000576334 SUCLA2Q9P2R7 463 aaPredicted RBP13.34□□□□□ -0.27
LITAF-219ENST00000576334 ARID2Q68CP9 1835 aa13.34□□□□□ -0.27
LITAF-219ENST00000576334 LINC01565O15544 149 aa13.33□□□□□ -0.28
LITAF-219ENST00000576334 RB1P06400 928 aa13.33□□□□□ -0.28
LITAF-219ENST00000576334 DLX2Q07687 328 aaPredicted RBP13.33□□□□□ -0.28
LITAF-219ENST00000576334 HYAL1Q12794 435 aa13.33□□□□□ -0.28
LITAF-219ENST00000576334 EPHA7Q15375 998 aa13.33□□□□□ -0.28
LITAF-219ENST00000576334 AAK1Q2M2I8 961 aa13.33□□□□□ -0.28
LITAF-219ENST00000576334 LRRC55Q6ZSA7 311 aa13.33□□□□□ -0.28
LITAF-219ENST00000576334 KHSRPQ92945 711 aaKnown RBP eCLIP13.33□□□□□ -0.28
LITAF-219ENST00000576334 NLRP4Q96MN2 994 aa13.33□□□□□ -0.28
LITAF-219ENST00000576334 C11orf84Q9BUA3 381 aaPredicted RBP13.33□□□□□ -0.28
LITAF-219ENST00000576334 NSUN3Q9H649 340 aaKnown RBP13.33□□□□□ -0.28
LITAF-219ENST00000576334 IGFLR1Q9H665 355 aa13.33□□□□□ -0.28
LITAF-219ENST00000576334 CD320Q9NPF0 282 aa13.33□□□□□ -0.28
LITAF-219ENST00000576334 C1orf112Q9NSG2 853 aa13.33□□□□□ -0.28
LITAF-219ENST00000576334 MEIS3P2A8K0S8 358 aa13.32□□□□□ -0.28
LITAF-219ENST00000576334 TBX3O15119 743 aa13.32□□□□□ -0.28
LITAF-219ENST00000576334 SLITRK3O94933 977 aa13.32□□□□□ -0.28
LITAF-219ENST00000576334 P4HBP07237 508 aaKnown RBP13.32□□□□□ -0.28
LITAF-219ENST00000576334 IL9P15248 144 aa13.32□□□□□ -0.28
LITAF-219ENST00000576334 ATF7P17544 494 aaPredicted RBP13.32□□□□□ -0.28
LITAF-219ENST00000576334 LTBRP36941 435 aa13.32□□□□□ -0.28
LITAF-219ENST00000576334 TXKP42681 527 aa13.32□□□□□ -0.28
LITAF-219ENST00000576334 CLUL1Q15846 466 aa13.32□□□□□ -0.28
LITAF-219ENST00000576334 CALCRLQ16602 461 aa13.32□□□□□ -0.28
LITAF-219ENST00000576334 TIGD5Q53EQ6 642 aa13.32□□□□□ -0.28
LITAF-219ENST00000576334 CLLU1OSQ5K130 101 aa13.32□□□□□ -0.28
LITAF-219ENST00000576334 SPOUT1Q5T280 376 aaKnown RBP13.32□□□□□ -0.28
LITAF-219ENST00000576334 ECHDC2Q86YB7 292 aa13.32□□□□□ -0.28
LITAF-219ENST00000576334 TPH2Q8IWU9 490 aa13.32□□□□□ -0.28
LITAF-219ENST00000576334 POF1BQ8WVV4 589 aa13.32□□□□□ -0.28
LITAF-219ENST00000576334 CEP170P1Q96L14 293 aa13.32□□□□□ -0.28
LITAF-219ENST00000576334 CASD1Q96PB1 797 aa13.32□□□□□ -0.28
LITAF-219ENST00000576334 EIF2AK1Q9BQI3 630 aaKnown RBP13.32□□□□□ -0.28
LITAF-219ENST00000576334 CWH43Q9H720 699 aa13.32□□□□□ -0.28
LITAF-219ENST00000576334 MINDY3Q9H8M7 445 aa13.32□□□□□ -0.28
LITAF-219ENST00000576334 ATP6V0A4Q9HBG4 840 aa13.32□□□□□ -0.28
LITAF-219ENST00000576334 BRMS1Q9HCU9 246 aa13.32□□□□□ -0.28
LITAF-219ENST00000576334 TMEM161AQ9NX61 479 aa13.32□□□□□ -0.28
LITAF-219ENST00000576334 CLDND1Q9NY35 253 aa13.32□□□□□ -0.28
LITAF-219ENST00000576334 NCOR1O75376 2440 aa13.32□□□□□ -0.28
LITAF-219ENST00000576334 POTEMA6NI47 508 aa13.31□□□□□ -0.28
LITAF-219ENST00000576334 NEMFO60524 1076 aa13.31□□□□□ -0.28
LITAF-219ENST00000576334 CD2BP2O95400 341 aaKnown RBP13.31□□□□□ -0.28
LITAF-219ENST00000576334 ZSCAN20P17040 1043 aaPredicted RBP13.31□□□□□ -0.28
LITAF-219ENST00000576334 YWHABP31946 246 aaKnown RBP13.31□□□□□ -0.28
LITAF-219ENST00000576334 MCM7P33993 719 aa13.31□□□□□ -0.28
LITAF-219ENST00000576334 RBM10P98175 930 aaKnown RBP13.31□□□□□ -0.28
LITAF-219ENST00000576334 TRIM29Q14134 588 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms