RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-223ENST00000573895 BANK1Q8NDB2 785 aa16.06■□□□□ 0.16
ABR-223ENST00000573895 LEO1Q8WVC0 666 aaPredicted RBP16.06■□□□□ 0.16
ABR-223ENST00000573895 SAMD11Q96NU1 681 aa16.06■□□□□ 0.16
ABR-223ENST00000573895 MTMR9Q96QG7 549 aa16.06■□□□□ 0.16
ABR-223ENST00000573895 YME1L1Q96TA2 773 aa16.06■□□□□ 0.16
ABR-223ENST00000573895 CDHR5Q9HBB8 845 aa16.06■□□□□ 0.16
ABR-223ENST00000573895 ERVK-5Q9HDB9 667 aa16.06■□□□□ 0.16
ABR-223ENST00000573895 LMCD1Q9NZU5 365 aa16.06■□□□□ 0.16
ABR-223ENST00000573895 AKT3Q9Y243 479 aa16.06■□□□□ 0.16
ABR-223ENST00000573895 MYH15Q9Y2K3 1946 aa16.06■□□□□ 0.16
ABR-223ENST00000573895 SPTLC2O15270 562 aa16.05■□□□□ 0.16
ABR-223ENST00000573895 MAFO75444 373 aaPredicted RBP16.05■□□□□ 0.16
ABR-223ENST00000573895 UPP2O95045 317 aa16.05■□□□□ 0.16
ABR-223ENST00000573895 VTNP04004 478 aa16.05■□□□□ 0.16
ABR-223ENST00000573895 DNM2P50570 870 aa16.05■□□□□ 0.16
ABR-223ENST00000573895 CLCN3P51790 818 aa16.05■□□□□ 0.16
ABR-223ENST00000573895 CEBPZQ03701 1054 aaKnown RBP16.05■□□□□ 0.16
ABR-223ENST00000573895 PTPAQ15257 358 aa16.05■□□□□ 0.16
ABR-223ENST00000573895 KIZQ2M2Z5 673 aa16.05■□□□□ 0.16
ABR-223ENST00000573895 MTERF2Q49AM1 385 aa16.05■□□□□ 0.16
ABR-223ENST00000573895 RTN4RL1Q86UN2 441 aaPredicted RBP16.05■□□□□ 0.16
ABR-223ENST00000573895 NEK9Q8TD19 979 aa16.05■□□□□ 0.16
ABR-223ENST00000573895 TMEM40Q8WWA1 233 aa16.05■□□□□ 0.16
ABR-223ENST00000573895 LINC01599Q8WXQ3 324 aa16.05■□□□□ 0.16
ABR-223ENST00000573895 ARNTL2Q8WYA1 636 aa16.05■□□□□ 0.16
ABR-223ENST00000573895 ADAMTS10Q9H324 1103 aa16.05■□□□□ 0.16
ABR-223ENST00000573895 ZSWIM4Q9H7M6 989 aa16.05■□□□□ 0.16
ABR-223ENST00000573895 TTC12Q9H892 705 aaPredicted RBP16.05■□□□□ 0.16
ABR-223ENST00000573895 SUGCTQ9HAC7 445 aa16.05■□□□□ 0.16
ABR-223ENST00000573895 RC3H2Q9HBD1 1191 aaKnown RBP16.05■□□□□ 0.16
ABR-223ENST00000573895 GINS2Q9Y248 185 aa16.05■□□□□ 0.16
ABR-223ENST00000573895 NOC2LQ9Y3T9 749 aaKnown RBP16.05■□□□□ 0.16
ABR-223ENST00000573895 ARID2Q68CP9 1835 aa16.05■□□□□ 0.16
ABR-223ENST00000573895 GTPBP6O43824 516 aaPredicted RBP16.04■□□□□ 0.16
ABR-223ENST00000573895 LYPLA2O95372 231 aa16.04■□□□□ 0.16
ABR-223ENST00000573895 STAG3L1P0CL83 205 aa16.04■□□□□ 0.16
ABR-223ENST00000573895 IGFBP4P22692 258 aa16.04■□□□□ 0.16
ABR-223ENST00000573895 EIF4BP23588 611 aaKnown RBP16.04■□□□□ 0.16
ABR-223ENST00000573895 NLRP11P59045 1033 aaKnown RBP16.04■□□□□ 0.16
ABR-223ENST00000573895 ARL6IP4Q66PJ3 421 aaKnown RBP16.04■□□□□ 0.16
ABR-223ENST00000573895 NCAPH2Q6IBW4 605 aa16.04■□□□□ 0.16
ABR-223ENST00000573895 OTUD6AQ7L8S5 288 aa16.04■□□□□ 0.16
ABR-223ENST00000573895 NPAS4Q8IUM7 802 aa16.04■□□□□ 0.16
ABR-223ENST00000573895 LRRC71Q8N4P6 559 aa16.04■□□□□ 0.16
ABR-223ENST00000573895 ZNF689Q96CS4 500 aaPredicted RBP16.04■□□□□ 0.16
ABR-223ENST00000573895 OSMRQ99650 979 aa16.04■□□□□ 0.16
ABR-223ENST00000573895 HSD17B14Q9BPX1 270 aa16.04■□□□□ 0.16
ABR-223ENST00000573895 LXNQ9BS40 222 aa16.04■□□□□ 0.16
ABR-223ENST00000573895 TMX1Q9H3N1 280 aa16.04■□□□□ 0.16
ABR-223ENST00000573895 CERS4Q9HA82 394 aa16.04■□□□□ 0.16
ABR-223ENST00000573895 CYP26B1Q9NR63 512 aa16.04■□□□□ 0.16
ABR-223ENST00000573895 C1orf112Q9NSG2 853 aa16.04■□□□□ 0.16
ABR-223ENST00000573895 COL4A4P53420 1690 aaPredicted RBP16.04■□□□□ 0.16
ABR-223ENST00000573895 EPOPA6NHQ4 379 aa16.03■□□□□ 0.16
ABR-223ENST00000573895 WNT7AO00755 349 aa16.03■□□□□ 0.16
ABR-223ENST00000573895 LPXNO60711 386 aa16.03■□□□□ 0.16
ABR-223ENST00000573895 PRPF40AO75400 957 aaKnown RBP16.03■□□□□ 0.16
ABR-223ENST00000573895 SLITRK3O94933 977 aa16.03■□□□□ 0.16
ABR-223ENST00000573895 YWHABP31946 246 aaKnown RBP16.03■□□□□ 0.16
ABR-223ENST00000573895 MCM7P33993 719 aa16.03■□□□□ 0.16
ABR-223ENST00000573895 GPC3P51654 580 aa16.03■□□□□ 0.16
ABR-223ENST00000573895 ATP2C1P98194 919 aaPredicted RBP16.03■□□□□ 0.16
ABR-223ENST00000573895 NFX1Q12986 1120 aaKnown RBP16.03■□□□□ 0.16
ABR-223ENST00000573895 PTGDRQ13258 359 aa16.03■□□□□ 0.16
ABR-223ENST00000573895 FAM228AQ86W67 206 aa16.03■□□□□ 0.16
ABR-223ENST00000573895 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.03■□□□□ 0.16
ABR-223ENST00000573895 CHAMP1Q96JM3 812 aa16.03■□□□□ 0.16
ABR-223ENST00000573895 RGS18Q9NS28 235 aa16.03■□□□□ 0.16
ABR-223ENST00000573895 WRAP73Q9P2S5 460 aaPredicted RBP16.03■□□□□ 0.16
ABR-223ENST00000573895 ST3GAL5Q9UNP4 418 aa16.03■□□□□ 0.16
ABR-223ENST00000573895 RWDD3Q9Y3V2 267 aa16.03■□□□□ 0.16
ABR-223ENST00000573895 MTCH2Q9Y6C9 303 aa16.03■□□□□ 0.16
ABR-223ENST00000573895 ADGRA3Q8IWK6 1321 aa16.02■□□□□ 0.16
ABR-223ENST00000573895 FNDC1Q4ZHG4 1894 aaPredicted RBP16.02■□□□□ 0.16
ABR-223ENST00000573895 GOLGA6L4A6NEF3 574 aa16.02■□□□□ 0.16
ABR-223ENST00000573895 RBAK-RBAKDNI3L0D1 243 aa16.02■□□□□ 0.16
ABR-223ENST00000573895 GAS2O43903 313 aaKnown RBP16.02■□□□□ 0.16
ABR-223ENST00000573895 DGKIO75912 1065 aa16.02■□□□□ 0.16
ABR-223ENST00000573895 RFC5P40937 340 aa16.02■□□□□ 0.16
ABR-223ENST00000573895 PRPHP41219 470 aa16.02■□□□□ 0.16
ABR-223ENST00000573895 TXKP42681 527 aa16.02■□□□□ 0.16
ABR-223ENST00000573895 ME1P48163 572 aa16.02■□□□□ 0.16
ABR-223ENST00000573895 SARSP49591 514 aaKnown RBP16.02■□□□□ 0.16
ABR-223ENST00000573895 GRB10Q13322 594 aa16.02■□□□□ 0.16
ABR-223ENST00000573895 TMEM266Q2M3C6 531 aa16.02■□□□□ 0.16
ABR-223ENST00000573895 SLC24A5Q71RS6 500 aa16.02■□□□□ 0.16
ABR-223ENST00000573895 ZNF410Q86VK4 478 aa16.02■□□□□ 0.16
ABR-223ENST00000573895 C4orf32Q8N8J7 132 aa16.02■□□□□ 0.16
ABR-223ENST00000573895 SLC7A3Q8WY07 619 aa16.02■□□□□ 0.16
ABR-223ENST00000573895 DYDC2Q96IM9 177 aa16.02■□□□□ 0.16
ABR-223ENST00000573895 CEP170P1Q96L14 293 aa16.02■□□□□ 0.16
ABR-223ENST00000573895 EIF2AK1Q9BQI3 630 aaKnown RBP16.02■□□□□ 0.16
ABR-223ENST00000573895 DHX33Q9H6R0 707 aaKnown RBP16.02■□□□□ 0.16
ABR-223ENST00000573895 RGL1Q9NZL6 768 aa16.02■□□□□ 0.16
ABR-223ENST00000573895 SRPRBQ9Y5M8 271 aaKnown RBP16.02■□□□□ 0.16
ABR-223ENST00000573895 DENND3A2RUS2 1198 aa16.01■□□□□ 0.15
ABR-223ENST00000573895 TMEM150BA6NC51 233 aa16.01■□□□□ 0.15
ABR-223ENST00000573895 RFXAPO00287 272 aa16.01■□□□□ 0.15
ABR-223ENST00000573895 CUTAO60888 179 aa16.01■□□□□ 0.15
ABR-223ENST00000573895 XRCC6P12956 609 aaKnown RBP eCLIP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms