RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 XPNPEP1Q9NQW7 623 aa31■■■□□ 2.55
SCARF1-207ENST00000573867 ANKEF1Q9NU02 776 aa31■■■□□ 2.55
SCARF1-207ENST00000573867 FGFR4P22455 802 aa30.99■■■□□ 2.55
SCARF1-207ENST00000573867 RFC5P40937 340 aa30.99■■■□□ 2.55
SCARF1-207ENST00000573867 EMC2Q15006 297 aa30.99■■■□□ 2.55
SCARF1-207ENST00000573867 RHPN2Q8IUC4 686 aa30.99■■■□□ 2.55
SCARF1-207ENST00000573867 NLRP7Q8WX94 980 aa30.99■■■□□ 2.55
SCARF1-207ENST00000573867 SLC7A3Q8WY07 619 aa30.99■■■□□ 2.55
SCARF1-207ENST00000573867 JPH2Q9BR39 696 aaPredicted RBP30.99■■■□□ 2.55
SCARF1-207ENST00000573867 POLR3CQ9BUI4 534 aaPredicted RBP30.99■■■□□ 2.55
SCARF1-207ENST00000573867 RC3H2Q9HBD1 1191 aaKnown RBP30.99■■■□□ 2.55
SCARF1-207ENST00000573867 TUFT1Q9NNX1 390 aa30.99■■■□□ 2.55
SCARF1-207ENST00000573867 TTC3P53804 2025 aa30.98■■■□□ 2.55
SCARF1-207ENST00000573867 A0A087WZ62 844 aa30.98■■■□□ 2.55
SCARF1-207ENST00000573867 GPR182O15218 404 aa30.98■■■□□ 2.55
SCARF1-207ENST00000573867 RARRES1P49788 294 aa30.98■■■□□ 2.55
SCARF1-207ENST00000573867 DNM2P50570 870 aa30.98■■■□□ 2.55
SCARF1-207ENST00000573867 DSC3Q14574 896 aa30.98■■■□□ 2.55
SCARF1-207ENST00000573867 ECM1Q16610 540 aa30.98■■■□□ 2.55
SCARF1-207ENST00000573867 POTEGQ6S5H5 508 aa30.98■■■□□ 2.55
SCARF1-207ENST00000573867 ZNF710Q8N1W2 664 aa30.98■■■□□ 2.55
SCARF1-207ENST00000573867 ARNTL2Q8WYA1 636 aa30.98■■■□□ 2.55
SCARF1-207ENST00000573867 YME1L1Q96TA2 773 aa30.98■■■□□ 2.55
SCARF1-207ENST00000573867 FDXACB1Q9BRP7 624 aaPredicted RBP30.98■■■□□ 2.55
SCARF1-207ENST00000573867 VPS37CA5D8V6 355 aaPredicted RBP30.97■■■□□ 2.55
SCARF1-207ENST00000573867 RPA1P27694 616 aa30.97■■■□□ 2.55
SCARF1-207ENST00000573867 FERMT3Q86UX7 667 aa30.97■■■□□ 2.55
SCARF1-207ENST00000573867 IGSF22Q8N9C0 903 aa30.97■■■□□ 2.55
SCARF1-207ENST00000573867 SCLT1Q96NL6 688 aa30.97■■■□□ 2.55
SCARF1-207ENST00000573867 ADAM2Q99965 735 aa30.97■■■□□ 2.55
SCARF1-207ENST00000573867 PP2D1A8MPX8 630 aa30.96■■■□□ 2.55
SCARF1-207ENST00000573867 SYT1P21579 422 aa30.96■■■□□ 2.55
SCARF1-207ENST00000573867 ATP2C1P98194 919 aaPredicted RBP30.96■■■□□ 2.55
SCARF1-207ENST00000573867 PRPF31Q8WWY3 499 aaKnown RBP30.96■■■□□ 2.55
SCARF1-207ENST00000573867 COL4A3BPQ9Y5P4 624 aa30.96■■■□□ 2.55
SCARF1-207ENST00000573867 PRUNE2Q8WUY3 3088 aa30.95■■■□□ 2.55
SCARF1-207ENST00000573867 PRPHP41219 470 aa30.95■■■□□ 2.55
SCARF1-207ENST00000573867 ERVK-21P61565 698 aa30.95■■■□□ 2.55
SCARF1-207ENST00000573867 NLRP4Q96MN2 994 aa30.95■■■□□ 2.55
SCARF1-207ENST00000573867 C17orf80Q9BSJ5 609 aa30.95■■■□□ 2.55
SCARF1-207ENST00000573867 RGS18Q9NS28 235 aa30.95■■■□□ 2.55
SCARF1-207ENST00000573867 LRWD1Q9UFC0 647 aa30.95■■■□□ 2.55
SCARF1-207ENST00000573867 MTUS1Q9ULD2 1270 aa30.95■■■□□ 2.55
SCARF1-207ENST00000573867 C9IYK1 514 aa30.94■■■□□ 2.54
SCARF1-207ENST00000573867 LAD1O00515 517 aa30.94■■■□□ 2.54
SCARF1-207ENST00000573867 ODR4Q5SWX8 454 aa30.94■■■□□ 2.54
SCARF1-207ENST00000573867 ZNF410Q86VK4 478 aa30.94■■■□□ 2.54
SCARF1-207ENST00000573867 NPAS4Q8IUM7 802 aa30.94■■■□□ 2.54
SCARF1-207ENST00000573867 ERMNQ8TAM6 284 aa30.94■■■□□ 2.54
SCARF1-207ENST00000573867 ZNF689Q96CS4 500 aaPredicted RBP30.94■■■□□ 2.54
SCARF1-207ENST00000573867 GAS2L1Q99501 681 aaPredicted RBP30.94■■■□□ 2.54
SCARF1-207ENST00000573867 MTRQ99707 1265 aa30.94■■■□□ 2.54
SCARF1-207ENST00000573867 GCOM2Q9BZD3 368 aaPredicted RBP30.94■■■□□ 2.54
SCARF1-207ENST00000573867 IFT122Q9HBG6 1241 aa30.94■■■□□ 2.54
SCARF1-207ENST00000573867 COL4A4P53420 1690 aaPredicted RBP30.93■■■□□ 2.54
SCARF1-207ENST00000573867 DENND3A2RUS2 1198 aa30.93■■■□□ 2.54
SCARF1-207ENST00000573867 DGKIO75912 1065 aa30.93■■■□□ 2.54
SCARF1-207ENST00000573867 LINC00271P0C7V0 271 aa30.93■■■□□ 2.54
SCARF1-207ENST00000573867 XRCC6P12956 609 aaKnown RBP eCLIP30.93■■■□□ 2.54
SCARF1-207ENST00000573867 PDCP20941 246 aa30.93■■■□□ 2.54
SCARF1-207ENST00000573867 IBSPP21815 317 aaPredicted RBP30.93■■■□□ 2.54
SCARF1-207ENST00000573867 SARSP49591 514 aaKnown RBP30.93■■■□□ 2.54
SCARF1-207ENST00000573867 GATMP50440 423 aa30.93■■■□□ 2.54
SCARF1-207ENST00000573867 LAMTOR4Q0VGL1 99 aa30.93■■■□□ 2.54
SCARF1-207ENST00000573867 PDIA5Q14554 519 aa30.93■■■□□ 2.54
SCARF1-207ENST00000573867 EXOC8Q8IYI6 725 aa30.93■■■□□ 2.54
SCARF1-207ENST00000573867 MAFAQ8NHW3 353 aaPredicted RBP30.93■■■□□ 2.54
SCARF1-207ENST00000573867 PSPC1Q8WXF1 523 aaKnown RBP30.93■■■□□ 2.54
SCARF1-207ENST00000573867 TGS1Q96RS0 853 aaKnown RBP30.93■■■□□ 2.54
SCARF1-207ENST00000573867 REV3LO60673 3130 aa30.93■■■□□ 2.54
SCARF1-207ENST00000573867 GAS2O43903 313 aaKnown RBP30.92■■■□□ 2.54
SCARF1-207ENST00000573867 CDC25AP30304 524 aa30.92■■■□□ 2.54
SCARF1-207ENST00000573867 CCT6AP40227 531 aaKnown RBP30.92■■■□□ 2.54
SCARF1-207ENST00000573867 CDC42EP1Q00587 391 aa30.92■■■□□ 2.54
SCARF1-207ENST00000573867 BRAPQ7Z569 592 aa30.92■■■□□ 2.54
SCARF1-207ENST00000573867 MMTAG2Q9BU76 263 aaKnown RBP30.92■■■□□ 2.54
SCARF1-207ENST00000573867 DBR1Q9UK59 544 aaKnown RBP30.92■■■□□ 2.54
SCARF1-207ENST00000573867 ADGRA3Q8IWK6 1321 aa30.92■■■□□ 2.54
SCARF1-207ENST00000573867 LPXNO60711 386 aa30.91■■■□□ 2.54
SCARF1-207ENST00000573867 USO1O60763 962 aaKnown RBP30.91■■■□□ 2.54
SCARF1-207ENST00000573867 DGAT1O75907 488 aa30.91■■■□□ 2.54
SCARF1-207ENST00000573867 RESTQ13127 1097 aa30.91■■■□□ 2.54
SCARF1-207ENST00000573867 DTHD1Q6ZMT9 781 aa30.91■■■□□ 2.54
SCARF1-207ENST00000573867 SLC24A5Q71RS6 500 aa30.91■■■□□ 2.54
SCARF1-207ENST00000573867 ASAP3Q8TDY4 903 aa30.91■■■□□ 2.54
SCARF1-207ENST00000573867 NACC1Q96RE7 527 aa30.91■■■□□ 2.54
SCARF1-207ENST00000573867 MINDY3Q9H8M7 445 aa30.91■■■□□ 2.54
SCARF1-207ENST00000573867 ATP6V0A4Q9HBG4 840 aa30.91■■■□□ 2.54
SCARF1-207ENST00000573867 SRGAP2CP0DJJ0 459 aa30.9■■■□□ 2.54
SCARF1-207ENST00000573867 IGFBP4P22692 258 aa30.9■■■□□ 2.54
SCARF1-207ENST00000573867 FAM189BP81408 668 aa30.9■■■□□ 2.54
SCARF1-207ENST00000573867 HAUS3Q68CZ6 603 aa30.9■■■□□ 2.54
SCARF1-207ENST00000573867 SNX29Q8TEQ0 813 aa30.9■■■□□ 2.54
SCARF1-207ENST00000573867 GDPD5Q8WTR4 605 aa30.9■■■□□ 2.54
SCARF1-207ENST00000573867 TCP11Q8WWU5 503 aa30.9■■■□□ 2.54
SCARF1-207ENST00000573867 C1orf112Q9NSG2 853 aa30.9■■■□□ 2.54
SCARF1-207ENST00000573867 MTMR6Q9Y217 621 aa30.9■■■□□ 2.54
SCARF1-207ENST00000573867 MYO9BQ13459 2157 aa30.89■■■□□ 2.54
SCARF1-207ENST00000573867 ARL2P36404 184 aa30.89■■■□□ 2.54
SCARF1-207ENST00000573867 GRB10Q13322 594 aa30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms