RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 DOK7Q18PE1 504 aa20.71■□□□□ 0.91
SCARF1-206ENST00000573852 ADAT2Q7Z6V5 191 aaKnown RBP20.71■□□□□ 0.91
SCARF1-206ENST00000573852 KSR1Q8IVT5 923 aa20.71■□□□□ 0.91
SCARF1-206ENST00000573852 RFFLQ8WZ73 363 aa20.71■□□□□ 0.91
SCARF1-206ENST00000573852 CABS1Q96KC9 395 aa20.71■□□□□ 0.91
SCARF1-206ENST00000573852 CRAMP1Q96RY5 1269 aa20.71■□□□□ 0.91
SCARF1-206ENST00000573852 OLFML3Q9NRN5 406 aa20.71■□□□□ 0.91
SCARF1-206ENST00000573852 DNAJC12Q9UKB3 198 aa20.71■□□□□ 0.91
SCARF1-206ENST00000573852 NCANO14594 1321 aa20.71■□□□□ 0.91
SCARF1-206ENST00000573852 QSER1Q2KHR3 1735 aa20.71■□□□□ 0.91
SCARF1-206ENST00000573852 PSMC2P35998 433 aaKnown RBP20.71■□□□□ 0.91
SCARF1-206ENST00000573852 KRT71Q3SY84 523 aa20.71■□□□□ 0.91
SCARF1-206ENST00000573852 RAPGEF5Q92565 580 aa20.71■□□□□ 0.91
SCARF1-206ENST00000573852 ARHGEF26Q96DR7 871 aa20.71■□□□□ 0.91
SCARF1-206ENST00000573852 SYT11Q9BT88 431 aa20.71■□□□□ 0.91
SCARF1-206ENST00000573852 POLR3CQ9BUI4 534 aaPredicted RBP20.71■□□□□ 0.91
SCARF1-206ENST00000573852 STK33Q9BYT3 514 aa20.71■□□□□ 0.91
SCARF1-206ENST00000573852 GPR88Q9GZN0 384 aa20.71■□□□□ 0.91
SCARF1-206ENST00000573852 VCPKMTQ9H867 229 aa20.71■□□□□ 0.91
SCARF1-206ENST00000573852 NYAP2Q9P242 653 aa20.71■□□□□ 0.91
SCARF1-206ENST00000573852 TMEM253P0C7T8 217 aa20.7■□□□□ 0.9
SCARF1-206ENST00000573852 TCP10Q12799 353 aa20.7■□□□□ 0.9
SCARF1-206ENST00000573852 PRPF4BQ13523 1007 aaKnown RBP20.7■□□□□ 0.9
SCARF1-206ENST00000573852 ZBTB39O15060 712 aa20.7■□□□□ 0.9
SCARF1-206ENST00000573852 LMNB1P20700 586 aa20.7■□□□□ 0.9
SCARF1-206ENST00000573852 FMO5P49326 533 aa20.7■□□□□ 0.9
SCARF1-206ENST00000573852 IRX3P78415 501 aaPredicted RBP20.7■□□□□ 0.9
SCARF1-206ENST00000573852 CTTNQ14247 550 aaKnown RBP20.7■□□□□ 0.9
SCARF1-206ENST00000573852 PLS1Q14651 629 aa20.7■□□□□ 0.9
SCARF1-206ENST00000573852 FBXO11Q86XK2 927 aa20.7■□□□□ 0.9
SCARF1-206ENST00000573852 CCDC13Q8IYE1 715 aa20.7■□□□□ 0.9
SCARF1-206ENST00000573852 MYCT1Q8N699 235 aa20.7■□□□□ 0.9
SCARF1-206ENST00000573852 TXLNGYQ9BZA5 131 aa20.7■□□□□ 0.9
SCARF1-206ENST00000573852 ATP8A1Q9Y2Q0 1164 aa20.7■□□□□ 0.9
SCARF1-206ENST00000573852 PPEF1O14829 653 aaPredicted RBP20.69■□□□□ 0.9
SCARF1-206ENST00000573852 OPLAHO14841 1288 aa20.69■□□□□ 0.9
SCARF1-206ENST00000573852 CIITAP33076 1130 aa20.69■□□□□ 0.9
SCARF1-206ENST00000573852 PTENP60484 403 aa20.69■□□□□ 0.9
SCARF1-206ENST00000573852 CERKLQ49MI3 558 aaPredicted RBP20.69■□□□□ 0.9
SCARF1-206ENST00000573852 CBWD6Q4V339 395 aa20.69■□□□□ 0.9
SCARF1-206ENST00000573852 CBWD3Q5JTY5 395 aa20.69■□□□□ 0.9
SCARF1-206ENST00000573852 CBWD5Q5RIA9 395 aa20.69■□□□□ 0.9
SCARF1-206ENST00000573852 SP8Q8IXZ3 490 aa20.69■□□□□ 0.9
SCARF1-206ENST00000573852 ERVK-5Q9HDB9 667 aa20.69■□□□□ 0.9
SCARF1-206ENST00000573852 TAS2R14Q9NYV8 317 aa20.69■□□□□ 0.9
SCARF1-206ENST00000573852 PCDHAC2Q9Y5I4 1007 aa20.69■□□□□ 0.9
SCARF1-206ENST00000573852 DDTLA6NHG4 134 aaPredicted RBP20.69■□□□□ 0.9
SCARF1-206ENST00000573852 GAP43P17677 238 aa20.69■□□□□ 0.9
SCARF1-206ENST00000573852 USP8P40818 1118 aa20.69■□□□□ 0.9
SCARF1-206ENST00000573852 HHIPL2Q6UWX4 724 aa20.69■□□□□ 0.9
SCARF1-206ENST00000573852 CTNNBL1Q8WYA6 563 aaPredicted RBP20.69■□□□□ 0.9
SCARF1-206ENST00000573852 TEKT1Q969V4 418 aa20.69■□□□□ 0.9
SCARF1-206ENST00000573852 STK24Q9Y6E0 443 aa20.69■□□□□ 0.9
SCARF1-206ENST00000573852 F5H6K3 240 aa20.68■□□□□ 0.9
SCARF1-206ENST00000573852 PPFIA2O75334 1257 aa20.68■□□□□ 0.9
SCARF1-206ENST00000573852 FAM13AO94988 1023 aa20.68■□□□□ 0.9
SCARF1-206ENST00000573852 FOSP01100 380 aaPredicted RBP20.68■□□□□ 0.9
SCARF1-206ENST00000573852 PAEPP09466 180 aa20.68■□□□□ 0.9
SCARF1-206ENST00000573852 KLRC3Q07444 240 aa20.68■□□□□ 0.9
SCARF1-206ENST00000573852 DDR1Q08345 913 aa20.68■□□□□ 0.9
SCARF1-206ENST00000573852 ZNF211Q13398 564 aaPredicted RBP20.68■□□□□ 0.9
SCARF1-206ENST00000573852 SPRED3Q2MJR0 410 aa20.68■□□□□ 0.9
SCARF1-206ENST00000573852 PALB2Q86YC2 1186 aa20.68■□□□□ 0.9
SCARF1-206ENST00000573852 C3orf20Q8ND61 904 aa20.68■□□□□ 0.9
SCARF1-206ENST00000573852 FMO2Q99518 471 aa20.68■□□□□ 0.9
SCARF1-206ENST00000573852 ZC3H12CQ9C0D7 883 aaKnown RBP20.68■□□□□ 0.9
SCARF1-206ENST00000573852 SIPA1L1O43166 1804 aa20.68■□□□□ 0.9
SCARF1-206ENST00000573852 EIF3DO15371 548 aaKnown RBP eCLIP20.68■□□□□ 0.9
SCARF1-206ENST00000573852 MMP14P50281 582 aa20.68■□□□□ 0.9
SCARF1-206ENST00000573852 BYSLQ13895 437 aaKnown RBP20.68■□□□□ 0.9
SCARF1-206ENST00000573852 GLG1Q92896 1179 aa20.68■□□□□ 0.9
SCARF1-206ENST00000573852 SEC16BQ96JE7 1060 aa20.68■□□□□ 0.9
SCARF1-206ENST00000573852 OSBPL7Q9BZF2 842 aa20.68■□□□□ 0.9
SCARF1-206ENST00000573852 LRRC37AA6NMS7 1700 aa20.67■□□□□ 0.9
SCARF1-206ENST00000573852 TRIM49P0CI25 452 aa20.67■□□□□ 0.9
SCARF1-206ENST00000573852 TRIM49CP0CI26 452 aa20.67■□□□□ 0.9
SCARF1-206ENST00000573852 ADRA2BP18089 450 aa20.67■□□□□ 0.9
SCARF1-206ENST00000573852 ZNF76P36508 570 aa20.67■□□□□ 0.9
SCARF1-206ENST00000573852 DUPD1Q68J44 220 aa20.67■□□□□ 0.9
SCARF1-206ENST00000573852 CCDC121Q6ZUS5 278 aa20.67■□□□□ 0.9
SCARF1-206ENST00000573852 C1orf186Q6ZWK4 172 aa20.67■□□□□ 0.9
SCARF1-206ENST00000573852 HSD17B14Q9BPX1 270 aa20.67■□□□□ 0.9
SCARF1-206ENST00000573852 THAP2Q9H0W7 228 aa20.67■□□□□ 0.9
SCARF1-206ENST00000573852 ZDHHC18Q9NUE0 388 aa20.67■□□□□ 0.9
SCARF1-206ENST00000573852 COG5Q9UP83 839 aa20.67■□□□□ 0.9
SCARF1-206ENST00000573852 SMCHD1A6NHR9 2005 aa20.67■□□□□ 0.9
SCARF1-206ENST00000573852 SLITRK3O94933 977 aa20.67■□□□□ 0.9
SCARF1-206ENST00000573852 DR1Q01658 176 aa20.67■□□□□ 0.9
SCARF1-206ENST00000573852 IFFO1Q0D2I5 559 aa20.67■□□□□ 0.9
SCARF1-206ENST00000573852 IKQ13123 557 aaPredicted RBP20.67■□□□□ 0.9
SCARF1-206ENST00000573852 TPH2Q8IWU9 490 aa20.67■□□□□ 0.9
SCARF1-206ENST00000573852 MDM1Q8TC05 714 aa20.67■□□□□ 0.9
SCARF1-206ENST00000573852 TLCD1Q96CP7 247 aa20.67■□□□□ 0.9
SCARF1-206ENST00000573852 PSMD1Q99460 953 aa20.67■□□□□ 0.9
SCARF1-206ENST00000573852 ERP44Q9BS26 406 aa20.67■□□□□ 0.9
SCARF1-206ENST00000573852 RAB17Q9H0T7 212 aa20.67■□□□□ 0.9
SCARF1-206ENST00000573852 EPB41L4BQ9H329 900 aa20.67■□□□□ 0.9
SCARF1-206ENST00000573852 YY1AP1Q9H869 796 aa20.67■□□□□ 0.9
SCARF1-206ENST00000573852 C5orf60A6NFR6 353 aa20.66■□□□□ 0.9
SCARF1-206ENST00000573852 PPP1R12BO60237 982 aaPredicted RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms