RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 HAUS5O94927 633 aa13.25□□□□□ -0.29
PCDHGA9-201ENST00000573521 PLEKHA8P1O95397 391 aa13.25□□□□□ -0.29
PCDHGA9-201ENST00000573521 ZBED1O96006 694 aa13.25□□□□□ -0.29
PCDHGA9-201ENST00000573521 PAMP19021 973 aa13.25□□□□□ -0.29
PCDHGA9-201ENST00000573521 CXCR5P32302 372 aa13.25□□□□□ -0.29
PCDHGA9-201ENST00000573521 AP2B1P63010 937 aa13.25□□□□□ -0.29
PCDHGA9-201ENST00000573521 ARID5BQ14865 1188 aa13.25□□□□□ -0.29
PCDHGA9-201ENST00000573521 ARL13BQ3SXY8 428 aa13.25□□□□□ -0.29
PCDHGA9-201ENST00000573521 KCTD6Q8NC69 237 aa13.25□□□□□ -0.29
PCDHGA9-201ENST00000573521 GIPC2Q8TF65 315 aa13.25□□□□□ -0.29
PCDHGA9-201ENST00000573521 TRIM62Q9BVG3 475 aa13.25□□□□□ -0.29
PCDHGA9-201ENST00000573521 TRAIPQ9BWF2 469 aa13.25□□□□□ -0.29
PCDHGA9-201ENST00000573521 C2orf40Q9H1Z8 148 aa13.25□□□□□ -0.29
PCDHGA9-201ENST00000573521 DCP1AQ9NPI6 582 aaPredicted RBP13.25□□□□□ -0.29
PCDHGA9-201ENST00000573521 ASAP1Q9ULH1 1129 aa13.25□□□□□ -0.29
PCDHGA9-201ENST00000573521 NRXN1Q9ULB1 1477 aa13.25□□□□□ -0.29
PCDHGA9-201ENST00000573521 GSG1L2A8MUP6 293 aa13.25□□□□□ -0.29
PCDHGA9-201ENST00000573521 WDR64B1ANS9 1081 aa13.25□□□□□ -0.29
PCDHGA9-201ENST00000573521 COPB2P35606 906 aa13.25□□□□□ -0.29
PCDHGA9-201ENST00000573521 SOX5P35711 763 aa13.25□□□□□ -0.29
PCDHGA9-201ENST00000573521 IFRD2Q12894 506 aaPredicted RBP13.25□□□□□ -0.29
PCDHGA9-201ENST00000573521 MAPRE2Q15555 327 aa13.25□□□□□ -0.29
PCDHGA9-201ENST00000573521 AIFM3Q96NN9 605 aa13.25□□□□□ -0.29
PCDHGA9-201ENST00000573521 TRIM9Q9C026 710 aa13.25□□□□□ -0.29
PCDHGA9-201ENST00000573521 BHMT2Q9H2M3 363 aa13.25□□□□□ -0.29
PCDHGA9-201ENST00000573521 ADAM22Q9P0K1 906 aa13.25□□□□□ -0.29
PCDHGA9-201ENST00000573521 IQGAP1P46940 1657 aa13.25□□□□□ -0.29
PCDHGA9-201ENST00000573521 PPRC1Q5VV67 1664 aaKnown RBP13.25□□□□□ -0.29
PCDHGA9-201ENST00000573521 HGSO14964 777 aaPredicted RBP13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 CDH16O75309 829 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 CHEK2O96017 543 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 MUTP22033 750 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 JADE1Q6IE81 842 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 NUDCD1Q96RS6 583 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 KLC4Q9NSK0 619 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 KAT6BQ8WYB5 2073 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 P4HBP07237 508 aaKnown RBP13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 ASNSP08243 561 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 MAGOHP61326 146 aaKnown RBP13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 KAZNQ674X7 775 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 KRT80Q6KB66 452 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 ADAT2Q7Z6V5 191 aaKnown RBP13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 SCG3Q8WXD2 468 aaKnown RBP13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 HPS3Q969F9 1004 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 FEM1BQ9UK73 627 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 OVOS2A0A0J9YW53 1432 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 OVOS2Q6IE36 1432 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 RPS6KA4O75676 772 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 EYA4O95677 639 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 ART3Q13508 389 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 ANO5Q75V66 913 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 RSPH3Q86UC2 560 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 MSL3Q8N5Y2 521 aaKnown RBP13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 MMS19Q96T76 1030 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 WDR35Q9P2L0 1181 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 SPATA31A3Q5VYP0 1347 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 CLTCQ00610 1675 aaKnown RBP13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 PFDN1O60925 122 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 RTN2O75298 545 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 PLS3P13797 630 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 STILQ15468 1287 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 FAM133BQ5BKY9 247 aaKnown RBP13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 EPHA10Q5JZY3 1008 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 DAGLBQ8NCG7 672 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 ATL2Q8NHH9 583 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 MTRQ99707 1265 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 STK33Q9BYT3 514 aa13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 FRMD8P1Q9BZ68 369 aaPredicted RBP13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 SEPT9Q9UHD8 586 aaPredicted RBP13.24□□□□□ -0.29
PCDHGA9-201ENST00000573521 NPR1P16066 1061 aa13.23□□□□□ -0.29
PCDHGA9-201ENST00000573521 FOXO4P98177 505 aa13.23□□□□□ -0.29
PCDHGA9-201ENST00000573521 E2F5Q15329 346 aa13.23□□□□□ -0.29
PCDHGA9-201ENST00000573521 EPHA7Q15375 998 aa13.23□□□□□ -0.29
PCDHGA9-201ENST00000573521 SUPT20HL1Q3ZLR7 823 aa13.23□□□□□ -0.29
PCDHGA9-201ENST00000573521 TC2NQ8N9U0 490 aa13.23□□□□□ -0.29
PCDHGA9-201ENST00000573521 MED10Q9BTT4 135 aa13.23□□□□□ -0.29
PCDHGA9-201ENST00000573521 WWP1Q9H0M0 922 aa13.23□□□□□ -0.29
PCDHGA9-201ENST00000573521 ZFP69BQ9UJL9 534 aa13.23□□□□□ -0.29
PCDHGA9-201ENST00000573521 CFAP69A5D8W1 941 aa13.23□□□□□ -0.29
PCDHGA9-201ENST00000573521 LRRN2O75325 713 aa13.23□□□□□ -0.29
PCDHGA9-201ENST00000573521 ZYXQ15942 572 aaKnown RBP13.23□□□□□ -0.29
PCDHGA9-201ENST00000573521 PPP1R2P1Q96PQ5 205 aa13.23□□□□□ -0.29
PCDHGA9-201ENST00000573521 MROH7-TTC4A0A0A0MT08 1334 aa13.23□□□□□ -0.29
PCDHGA9-201ENST00000573521 NFKBIAP25963 317 aa13.23□□□□□ -0.29
PCDHGA9-201ENST00000573521 CDC27P30260 824 aa13.23□□□□□ -0.29
PCDHGA9-201ENST00000573521 VSNL1P62760 191 aa13.23□□□□□ -0.29
PCDHGA9-201ENST00000573521 BASP1P80723 227 aaKnown RBP13.23□□□□□ -0.29
PCDHGA9-201ENST00000573521 GABPAQ06546 454 aa13.23□□□□□ -0.29
PCDHGA9-201ENST00000573521 USP17L2Q6R6M4 530 aa13.23□□□□□ -0.29
PCDHGA9-201ENST00000573521 ACAD11Q709F0 780 aa13.23□□□□□ -0.29
PCDHGA9-201ENST00000573521 TBC1D1Q86TI0 1168 aaPredicted RBP13.23□□□□□ -0.29
PCDHGA9-201ENST00000573521 UHMK1Q8TAS1 419 aaKnown RBP13.23□□□□□ -0.29
PCDHGA9-201ENST00000573521 PCDHA6Q9UN73 950 aa13.23□□□□□ -0.29
PCDHGA9-201ENST00000573521 PCDHA8Q9Y5H6 950 aa13.23□□□□□ -0.29
PCDHGA9-201ENST00000573521 K7ERI5 159 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 CLIC2O15247 247 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 BRAFP15056 766 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 SLC7A5Q01650 507 aa13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 THOC5Q13769 683 aaKnown RBP13.22□□□□□ -0.29
PCDHGA9-201ENST00000573521 DNAL1Q4LDG9 190 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms