RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 SAMD11Q96NU1 681 aa13.25□□□□□ -0.29
NDE1-206ENST00000572967 TEKT3Q9BXF9 490 aa13.25□□□□□ -0.29
NDE1-206ENST00000572967 RC3H2Q9HBD1 1191 aaKnown RBP13.25□□□□□ -0.29
NDE1-206ENST00000572967 RCOR1Q9UKL0 485 aa13.25□□□□□ -0.29
NDE1-206ENST00000572967 PADI3Q9ULW8 664 aa13.25□□□□□ -0.29
NDE1-206ENST00000572967 KDM3AQ9Y4C1 1321 aa13.24□□□□□ -0.29
NDE1-206ENST00000572967 LONP1P36776 959 aaKnown RBP13.24□□□□□ -0.29
NDE1-206ENST00000572967 GATMP50440 423 aa13.24□□□□□ -0.29
NDE1-206ENST00000572967 BTG3Q14201 252 aaPredicted RBP13.24□□□□□ -0.29
NDE1-206ENST00000572967 AAK1Q2M2I8 961 aa13.24□□□□□ -0.29
NDE1-206ENST00000572967 KIZQ2M2Z5 673 aa13.24□□□□□ -0.29
NDE1-206ENST00000572967 TIGD5Q53EQ6 642 aa13.24□□□□□ -0.29
NDE1-206ENST00000572967 HAUS3Q68CZ6 603 aa13.24□□□□□ -0.29
NDE1-206ENST00000572967 POTEDQ86YR6 584 aa13.24□□□□□ -0.29
NDE1-206ENST00000572967 METTL13Q8N6R0 699 aa13.24□□□□□ -0.29
NDE1-206ENST00000572967 LEO1Q8WVC0 666 aaPredicted RBP13.24□□□□□ -0.29
NDE1-206ENST00000572967 BBXQ8WY36 941 aaPredicted RBP13.24□□□□□ -0.29
NDE1-206ENST00000572967 MRPL38Q96DV4 380 aaKnown RBP13.24□□□□□ -0.29
NDE1-206ENST00000572967 AK8Q96MA6 479 aa13.24□□□□□ -0.29
NDE1-206ENST00000572967 OSMRQ99650 979 aa13.24□□□□□ -0.29
NDE1-206ENST00000572967 PYM1Q9BRP8 204 aaKnown RBP13.24□□□□□ -0.29
NDE1-206ENST00000572967 UNC45AQ9H3U1 944 aa13.24□□□□□ -0.29
NDE1-206ENST00000572967 KCNMB3Q9NPA1 279 aa13.24□□□□□ -0.29
NDE1-206ENST00000572967 LMCD1Q9NZU5 365 aa13.24□□□□□ -0.29
NDE1-206ENST00000572967 TFIP11Q9UBB9 837 aaKnown RBP13.24□□□□□ -0.29
NDE1-206ENST00000572967 COG5Q9UP83 839 aa13.24□□□□□ -0.29
NDE1-206ENST00000572967 PCDHA10Q9Y5I2 948 aa13.24□□□□□ -0.29
NDE1-206ENST00000572967 MAFBQ9Y5Q3 323 aaPredicted RBP13.24□□□□□ -0.29
NDE1-206ENST00000572967 CLIC4Q9Y696 253 aa13.24□□□□□ -0.29
NDE1-206ENST00000572967 H3BNC9 293 aa13.23□□□□□ -0.29
NDE1-206ENST00000572967 ENPP3O14638 875 aa13.23□□□□□ -0.29
NDE1-206ENST00000572967 SLC26A4O43511 780 aa13.23□□□□□ -0.29
NDE1-206ENST00000572967 SLC37A4O43826 429 aa13.23□□□□□ -0.29
NDE1-206ENST00000572967 MGEA5O60502 916 aa13.23□□□□□ -0.29
NDE1-206ENST00000572967 CUTAO60888 179 aa13.23□□□□□ -0.29
NDE1-206ENST00000572967 OATP04181 439 aa13.23□□□□□ -0.29
NDE1-206ENST00000572967 LINC00271P0C7V0 271 aa13.23□□□□□ -0.29
NDE1-206ENST00000572967 NFX1Q12986 1120 aaKnown RBP13.23□□□□□ -0.29
NDE1-206ENST00000572967 NBR1Q14596 966 aa13.23□□□□□ -0.29
NDE1-206ENST00000572967 PTPAQ15257 358 aa13.23□□□□□ -0.29
NDE1-206ENST00000572967 PTPROQ16827 1216 aa13.23□□□□□ -0.29
NDE1-206ENST00000572967 ZNF484Q5JVG2 852 aa13.23□□□□□ -0.29
NDE1-206ENST00000572967 NPAS4Q8IUM7 802 aa13.23□□□□□ -0.29
NDE1-206ENST00000572967 LRRC71Q8N4P6 559 aa13.23□□□□□ -0.29
NDE1-206ENST00000572967 TMEM87AQ8NBN3 555 aa13.23□□□□□ -0.29
NDE1-206ENST00000572967 RDM1Q8NG50 284 aa13.23□□□□□ -0.29
NDE1-206ENST00000572967 ETNPPLQ8TBG4 499 aa13.23□□□□□ -0.29
NDE1-206ENST00000572967 SLC5A5Q92911 643 aa13.23□□□□□ -0.29
NDE1-206ENST00000572967 ZNF668Q96K58 619 aaPredicted RBP13.23□□□□□ -0.29
NDE1-206ENST00000572967 FAM167AQ96KS9 214 aa13.23□□□□□ -0.29
NDE1-206ENST00000572967 FTHL17Q9BXU8 183 aa13.23□□□□□ -0.29
NDE1-206ENST00000572967 TMX1Q9H3N1 280 aa13.23□□□□□ -0.29
NDE1-206ENST00000572967 UBE2ZQ9H832 354 aaPredicted RBP13.23□□□□□ -0.29
NDE1-206ENST00000572967 CDHR5Q9HBB8 845 aa13.23□□□□□ -0.29
NDE1-206ENST00000572967 ERVK-5Q9HDB9 667 aa13.23□□□□□ -0.29
NDE1-206ENST00000572967 DISC1Q9NRI5 854 aa13.23□□□□□ -0.29
NDE1-206ENST00000572967 PCDHA12Q9UN75 941 aa13.23□□□□□ -0.29
NDE1-206ENST00000572967 AKT3Q9Y243 479 aa13.23□□□□□ -0.29
NDE1-206ENST00000572967 NOC2LQ9Y3T9 749 aaKnown RBP13.23□□□□□ -0.29
NDE1-206ENST00000572967 SRPRBQ9Y5M8 271 aaKnown RBP13.23□□□□□ -0.29
NDE1-206ENST00000572967 MRPL42Q9Y6G3 142 aaKnown RBP13.23□□□□□ -0.29
NDE1-206ENST00000572967 ZNF862O60290 1169 aa13.22□□□□□ -0.29
NDE1-206ENST00000572967 RPS6KA5O75582 802 aa13.22□□□□□ -0.29
NDE1-206ENST00000572967 BMP1P13497 986 aa13.22□□□□□ -0.29
NDE1-206ENST00000572967 SFNP31947 248 aa13.22□□□□□ -0.29
NDE1-206ENST00000572967 TXKP42681 527 aa13.22□□□□□ -0.29
NDE1-206ENST00000572967 FXR2P51116 673 aaKnown RBP eCLIP13.22□□□□□ -0.29
NDE1-206ENST00000572967 JAK3P52333 1124 aa13.22□□□□□ -0.29
NDE1-206ENST00000572967 PDIA5Q14554 519 aa13.22□□□□□ -0.29
NDE1-206ENST00000572967 MIER3Q7Z3K6 550 aa13.22□□□□□ -0.29
NDE1-206ENST00000572967 RTN4RL1Q86UN2 441 aaPredicted RBP13.22□□□□□ -0.29
NDE1-206ENST00000572967 FAM228AQ86W67 206 aa13.22□□□□□ -0.29
NDE1-206ENST00000572967 KIAA0319LQ8IZA0 1049 aa13.22□□□□□ -0.29
NDE1-206ENST00000572967 ZNF579Q8NAF0 562 aaKnown RBP13.22□□□□□ -0.29
NDE1-206ENST00000572967 NEK9Q8TD19 979 aa13.22□□□□□ -0.29
NDE1-206ENST00000572967 ZNF689Q96CS4 500 aaPredicted RBP13.22□□□□□ -0.29
NDE1-206ENST00000572967 CCDC34Q96HJ3 373 aa13.22□□□□□ -0.29
NDE1-206ENST00000572967 MTMR9Q96QG7 549 aa13.22□□□□□ -0.29
NDE1-206ENST00000572967 MAP7D2Q96T17 732 aa13.22□□□□□ -0.29
NDE1-206ENST00000572967 FAM13BQ9NYF5 915 aa13.22□□□□□ -0.29
NDE1-206ENST00000572967 SEPT9Q9UHD8 586 aaPredicted RBP13.22□□□□□ -0.29
NDE1-206ENST00000572967 SQORQ9Y6N5 450 aa13.22□□□□□ -0.29
NDE1-206ENST00000572967 VCANP13611 3396 aa13.21□□□□□ -0.29
NDE1-206ENST00000572967 TRANK1O15050 2925 aa13.21□□□□□ -0.29
NDE1-206ENST00000572967 A0A1W2PQ27 194 aa13.21□□□□□ -0.29
NDE1-206ENST00000572967 A0A1W2PQ64 194 aa13.21□□□□□ -0.29
NDE1-206ENST00000572967 A0A1W2PQD8 194 aa13.21□□□□□ -0.29
NDE1-206ENST00000572967 DENND3A2RUS2 1198 aa13.21□□□□□ -0.29
NDE1-206ENST00000572967 TMEM150BA6NC51 233 aa13.21□□□□□ -0.29
NDE1-206ENST00000572967 VWA3AA6NCI4 1184 aa13.21□□□□□ -0.29
NDE1-206ENST00000572967 DKC1O60832 514 aaKnown RBP eCLIP13.21□□□□□ -0.29
NDE1-206ENST00000572967 DGKIO75912 1065 aa13.21□□□□□ -0.29
NDE1-206ENST00000572967 KCNA5P22460 613 aa13.21□□□□□ -0.29
NDE1-206ENST00000572967 MARCKSP29966 332 aaPredicted RBP13.21□□□□□ -0.29
NDE1-206ENST00000572967 TCEAL5Q5H9L2 206 aa13.21□□□□□ -0.29
NDE1-206ENST00000572967 EP400NLQ6ZTU2 488 aa13.21□□□□□ -0.29
NDE1-206ENST00000572967 CMTR2Q8IYT2 770 aaKnown RBP13.21□□□□□ -0.29
NDE1-206ENST00000572967 NME8Q8N427 588 aa13.21□□□□□ -0.29
NDE1-206ENST00000572967 BANK1Q8NDB2 785 aa13.21□□□□□ -0.29
NDE1-206ENST00000572967 RASSF8Q8NHQ8 419 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms