RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 ERV3-1Q14264 604 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 SNX17Q15036 470 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 MPEG1Q2M385 716 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 MMEL1Q495T6 779 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 ZNF362Q5T0B9 420 aaPredicted RBP5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 KAZNQ674X7 775 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 STYK1Q6J9G0 422 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 JMJD6Q6NYC1 403 aaPredicted RBP5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 BTNL9Q6UXG8 535 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 KIAA1211Q6ZU35 1233 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 MAEAQ7L5Y9 396 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 ADAT2Q7Z6V5 191 aaKnown RBP5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 DNAJB7Q7Z6W7 309 aaPredicted RBP5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 GALNT7Q86SF2 657 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 CMIPQ8IY22 773 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 OR8H3Q8N146 312 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 NUP93Q8N1F7 819 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 MNS1Q8NEH6 495 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 BICD2Q8TD16 824 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 BRSK1Q8TDC3 778 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 HERVK_113Q902F9 699 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 MAML1Q92585 1016 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 NXPE3Q969Y0 559 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 KLRG1Q96E93 195 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 FGD4Q96M96 766 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 PNMA5Q96PV4 448 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 PIGSQ96S52 555 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 PPP1R9BQ96SB3 815 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 LRFN3Q9BTN0 628 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 OR10A4Q9H209 315 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 SUDS3Q9H7L9 328 aaPredicted RBP5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 PRDM6Q9NQX0 595 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 TOR4AQ9NXH8 423 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 KIF17Q9P2E2 1029 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 FBXL5Q9UKA1 691 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 ITGB1BP2Q9UKP3 347 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 COG5Q9UP83 839 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 CORINQ9Y5Q5 1042 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 GPR45Q9Y5Y3 372 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 TACC3Q9Y6A5 838 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 LRRC14BA6NHZ5 514 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 MEN1O00255 615 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 SYT5O00445 386 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 DDX3XO00571 662 aaKnown RBP eCLIP5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 ACKR2O00590 384 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 MUSKO15146 869 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 SLC7A4O43246 635 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 PLA2G6O60733 806 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 DNAJA2O60884 412 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 USP2O75604 605 aaPredicted RBP5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 TMEM63AO94886 807 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 GSNP06396 782 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 CLTBP09497 229 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 HNRNPLP14866 589 aaKnown RBP eCLIP5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 TSHRP16473 764 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 C5AR1P21730 350 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 IL4RP24394 825 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 LSP1P33241 339 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 IL12RB1P42701 662 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 CTSOP43234 321 aaPredicted RBP5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 RCAN1P53805 252 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 SLC12A2P55011 1212 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 GPR85P60893 370 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 PRR20EP86478 221 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 PRR20CP86479 221 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 PRR20DP86480 221 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 PRR20BP86481 221 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 PRR20AP86496 221 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 KIF23Q02241 960 aaPredicted RBP5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 ALDH6A1Q02252 535 aaKnown RBP5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 HYAL2Q12891 473 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 PLS1Q14651 629 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 MUM1Q2TAK8 710 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 ADCK5Q3MIX3 580 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 MUM1L1Q5H9M0 696 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 C11orf88Q6PI97 169 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 KDELC1Q6UW63 502 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 RALYLQ86SE5 291 aaKnown RBP5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 PRPF39Q86UA1 669 aaKnown RBP5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 ZNF598Q86UK7 904 aaKnown RBP5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 TRIM59Q8IWR1 403 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 TTLL11Q8NHH1 800 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 SPPL3Q8TCT6 385 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 STK35Q8TDR2 534 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 ASAP3Q8TDY4 903 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 UTP15Q8TED0 518 aaKnown RBP5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 DCAF4Q8WV16 495 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 STON2Q8WXE9 905 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 KIF1BPQ96EK5 621 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 FSD1Q9BTV5 496 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 LGR4Q9BXB1 951 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 STK33Q9BYT3 514 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 UNKQ9C0B0 810 aaKnown RBP5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 SLC6A16Q9GZN6 736 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 CLEC4MQ9H2X3 399 aaPredicted RBP5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 PNPLA8Q9NP80 782 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 CCDC177Q9NQR7 707 aaPredicted RBP5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 PICK1Q9NRD5 415 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 FAM86C1Q9NVL1 165 aa5.59□□□□□ -1.51
TOPBP1-210ENST00000572787 OXSMQ9NWU1 459 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms