RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 MUC6Q6W4X9 2439 aa17.62■□□□□ 0.41
CHD3-215ENST00000572750 USO1O60763 962 aaKnown RBP17.62■□□□□ 0.41
CHD3-215ENST00000572750 ACTN1P12814 892 aa17.62■□□□□ 0.41
CHD3-215ENST00000572750 PDIA4P13667 645 aaKnown RBP17.62■□□□□ 0.41
CHD3-215ENST00000572750 RFC5P40937 340 aa17.62■□□□□ 0.41
CHD3-215ENST00000572750 TSHZ1Q6ZSZ6 1077 aa17.62■□□□□ 0.41
CHD3-215ENST00000572750 DBF4BQ8NFT6 615 aa17.62■□□□□ 0.41
CHD3-215ENST00000572750 TMEM143Q96AN5 459 aa17.62■□□□□ 0.41
CHD3-215ENST00000572750 MTIF3Q9H2K0 278 aaKnown RBP17.62■□□□□ 0.41
CHD3-215ENST00000572750 ZNF576Q9H609 170 aa17.62■□□□□ 0.41
CHD3-215ENST00000572750 AGO3Q9H9G7 860 aaKnown RBP17.62■□□□□ 0.41
CHD3-215ENST00000572750 DDX19AQ9NUU7 478 aaKnown RBP17.62■□□□□ 0.41
CHD3-215ENST00000572750 DAXXQ9UER7 740 aaPredicted RBP17.62■□□□□ 0.41
CHD3-215ENST00000572750 KIAA1024Q9UPX6 916 aa17.62■□□□□ 0.41
CHD3-215ENST00000572750 ZDHHC9Q9Y397 364 aa17.62■□□□□ 0.41
CHD3-215ENST00000572750 PPME1Q9Y570 386 aa17.62■□□□□ 0.41
CHD3-215ENST00000572750 KDM3AQ9Y4C1 1321 aa17.62■□□□□ 0.41
CHD3-215ENST00000572750 TCF20Q9UGU0 1960 aaKnown RBP17.61■□□□□ 0.41
CHD3-215ENST00000572750 GPR32O75388 356 aa17.61■□□□□ 0.41
CHD3-215ENST00000572750 BAIAP3O94812 1187 aa17.61■□□□□ 0.41
CHD3-215ENST00000572750 BRD1O95696 1058 aa17.61■□□□□ 0.41
CHD3-215ENST00000572750 CD52P31358 61 aa17.61■□□□□ 0.41
CHD3-215ENST00000572750 NASPP49321 788 aaPredicted RBP17.61■□□□□ 0.41
CHD3-215ENST00000572750 GPC3P51654 580 aa17.61■□□□□ 0.41
CHD3-215ENST00000572750 NLRP11P59045 1033 aaKnown RBP17.61■□□□□ 0.41
CHD3-215ENST00000572750 SEPT8Q92599 483 aa17.61■□□□□ 0.41
CHD3-215ENST00000572750 ZNF396Q96N95 335 aaPredicted RBP17.61■□□□□ 0.41
CHD3-215ENST00000572750 SCLT1Q96NL6 688 aa17.61■□□□□ 0.41
CHD3-215ENST00000572750 NACC1Q96RE7 527 aa17.61■□□□□ 0.41
CHD3-215ENST00000572750 MTRQ99707 1265 aa17.61■□□□□ 0.41
CHD3-215ENST00000572750 JPH2Q9BR39 696 aaPredicted RBP17.61■□□□□ 0.41
CHD3-215ENST00000572750 ATP6V0A4Q9HBG4 840 aa17.61■□□□□ 0.41
CHD3-215ENST00000572750 XPNPEP1Q9NQW7 623 aa17.61■□□□□ 0.41
CHD3-215ENST00000572750 SUCLA2Q9P2R7 463 aaPredicted RBP17.61■□□□□ 0.41
CHD3-215ENST00000572750 THEGQ9P2T0 379 aa17.61■□□□□ 0.41
CHD3-215ENST00000572750 FBXO2Q9UK22 296 aaPredicted RBP17.61■□□□□ 0.41
CHD3-215ENST00000572750 DBR1Q9UK59 544 aaKnown RBP17.61■□□□□ 0.41
CHD3-215ENST00000572750 STK24Q9Y6E0 443 aa17.61■□□□□ 0.41
CHD3-215ENST00000572750 MUTP22033 750 aa17.6■□□□□ 0.41
CHD3-215ENST00000572750 DNM2P50570 870 aa17.6■□□□□ 0.41
CHD3-215ENST00000572750 WDR5P61964 334 aaKnown RBP17.6■□□□□ 0.41
CHD3-215ENST00000572750 PAK2Q13177 524 aa17.6■□□□□ 0.41
CHD3-215ENST00000572750 ADGRE1Q14246 886 aa17.6■□□□□ 0.41
CHD3-215ENST00000572750 STK38Q15208 465 aa17.6■□□□□ 0.41
CHD3-215ENST00000572750 KCNK18Q7Z418 384 aa17.6■□□□□ 0.41
CHD3-215ENST00000572750 CABP7Q86V35 215 aa17.6■□□□□ 0.41
CHD3-215ENST00000572750 RHPN2Q8IUC4 686 aa17.6■□□□□ 0.41
CHD3-215ENST00000572750 KSR1Q8IVT5 923 aa17.6■□□□□ 0.41
CHD3-215ENST00000572750 NLRP7Q8WX94 980 aa17.6■□□□□ 0.41
CHD3-215ENST00000572750 AK8Q96MA6 479 aa17.6■□□□□ 0.41
CHD3-215ENST00000572750 NLRP4Q96MN2 994 aa17.6■□□□□ 0.41
CHD3-215ENST00000572750 PLIN2Q99541 437 aa17.6■□□□□ 0.41
CHD3-215ENST00000572750 LRFN3Q9BTN0 628 aa17.6■□□□□ 0.41
CHD3-215ENST00000572750 CSRNP2Q9H175 543 aa17.6■□□□□ 0.41
CHD3-215ENST00000572750 ADAMTS10Q9H324 1103 aa17.6■□□□□ 0.41
CHD3-215ENST00000572750 TFIP11Q9UBB9 837 aaKnown RBP17.6■□□□□ 0.41
CHD3-215ENST00000572750 ARIH1Q9Y4X5 557 aaPredicted RBP17.6■□□□□ 0.41
CHD3-215ENST00000572750 SLC4A7Q9Y6M7 1214 aa17.6■□□□□ 0.41
CHD3-215ENST00000572750 ARHGEF35A5YM69 484 aa17.59■□□□□ 0.41
CHD3-215ENST00000572750 GRXCR1A8MXD5 290 aa17.59■□□□□ 0.41
CHD3-215ENST00000572750 E9PMD0 336 aa17.59■□□□□ 0.41
CHD3-215ENST00000572750 DGAT1O75907 488 aa17.59■□□□□ 0.41
CHD3-215ENST00000572750 LONP1P36776 959 aaKnown RBP17.59■□□□□ 0.41
CHD3-215ENST00000572750 CRYBB1P53674 252 aaPredicted RBP17.59■□□□□ 0.41
CHD3-215ENST00000572750 DEFB103AP81534 67 aa17.59■□□□□ 0.41
CHD3-215ENST00000572750 MRPS5P82675 430 aaKnown RBP17.59■□□□□ 0.41
CHD3-215ENST00000572750 GRB10Q13322 594 aa17.59■□□□□ 0.41
CHD3-215ENST00000572750 IKBKEQ14164 716 aa17.59■□□□□ 0.41
CHD3-215ENST00000572750 SLC39A14Q15043 492 aa17.59■□□□□ 0.41
CHD3-215ENST00000572750 SPECC1Q5M775 1068 aa17.59■□□□□ 0.41
CHD3-215ENST00000572750 TMCO2Q7Z6W1 182 aaPredicted RBP17.59■□□□□ 0.41
CHD3-215ENST00000572750 CHAMP1Q96JM3 812 aa17.59■□□□□ 0.41
CHD3-215ENST00000572750 CLIC6Q96NY7 704 aa17.59■□□□□ 0.41
CHD3-215ENST00000572750 PNMA5Q96PV4 448 aa17.59■□□□□ 0.41
CHD3-215ENST00000572750 BHMT2Q9H2M3 363 aa17.59■□□□□ 0.41
CHD3-215ENST00000572750 NOC2LQ9Y3T9 749 aaKnown RBP17.59■□□□□ 0.41
CHD3-215ENST00000572750 COL4A3BPQ9Y5P4 624 aa17.59■□□□□ 0.41
CHD3-215ENST00000572750 GAS2O43903 313 aaKnown RBP17.58■□□□□ 0.4
CHD3-215ENST00000572750 RPS6KA5O75582 802 aa17.58■□□□□ 0.4
CHD3-215ENST00000572750 XRCC6P12956 609 aaKnown RBP eCLIP17.58■□□□□ 0.4
CHD3-215ENST00000572750 ATP2A2P16615 1042 aaKnown RBP17.58■□□□□ 0.4
CHD3-215ENST00000572750 KCNJ6P48051 423 aa17.58■□□□□ 0.4
CHD3-215ENST00000572750 DNM1Q05193 864 aaKnown RBP17.58■□□□□ 0.4
CHD3-215ENST00000572750 CCDC85BQ15834 202 aaPredicted RBP17.58■□□□□ 0.4
CHD3-215ENST00000572750 HYIQ5T013 277 aa17.58■□□□□ 0.4
CHD3-215ENST00000572750 PADI6Q6TGC4 694 aa17.58■□□□□ 0.4
CHD3-215ENST00000572750 MAEAQ7L5Y9 396 aa17.58■□□□□ 0.4
CHD3-215ENST00000572750 FAM228AQ86W67 206 aa17.58■□□□□ 0.4
CHD3-215ENST00000572750 EXOC8Q8IYI6 725 aa17.58■□□□□ 0.4
CHD3-215ENST00000572750 LINC00301Q8NCQ3 95 aa17.58■□□□□ 0.4
CHD3-215ENST00000572750 PRPF31Q8WWY3 499 aaKnown RBP17.58■□□□□ 0.4
CHD3-215ENST00000572750 PSPC1Q8WXF1 523 aaKnown RBP17.58■□□□□ 0.4
CHD3-215ENST00000572750 APBB2Q92870 758 aa17.58■□□□□ 0.4
CHD3-215ENST00000572750 CDK5RAP3Q96JB5 506 aa17.58■□□□□ 0.4
CHD3-215ENST00000572750 PRDM12Q9H4Q4 367 aa17.58■□□□□ 0.4
CHD3-215ENST00000572750 EPHX3Q9H6B9 360 aa17.58■□□□□ 0.4
CHD3-215ENST00000572750 GPRC5CQ9NQ84 441 aa17.58■□□□□ 0.4
CHD3-215ENST00000572750 PADI3Q9ULW8 664 aa17.58■□□□□ 0.4
CHD3-215ENST00000572750 SRPRBQ9Y5M8 271 aaKnown RBP17.58■□□□□ 0.4
CHD3-215ENST00000572750 A0A087WZ62 844 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms