RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 SRFP11831 508 aa11.57□□□□□ -0.56
CHMP6-203ENST00000572525 SDSP20132 328 aa11.57□□□□□ -0.56
CHMP6-203ENST00000572525 ALDH7A1P49419 539 aaKnown RBP11.57□□□□□ -0.56
CHMP6-203ENST00000572525 ACTR2P61160 394 aa11.57□□□□□ -0.56
CHMP6-203ENST00000572525 LETM2Q2VYF4 491 aa11.57□□□□□ -0.56
CHMP6-203ENST00000572525 ZNF484Q5JVG2 852 aa11.57□□□□□ -0.56
CHMP6-203ENST00000572525 DDX53Q86TM3 631 aaKnown RBP11.57□□□□□ -0.56
CHMP6-203ENST00000572525 CABP7Q86V35 215 aa11.57□□□□□ -0.56
CHMP6-203ENST00000572525 ECHDC2Q86YB7 292 aa11.57□□□□□ -0.56
CHMP6-203ENST00000572525 C1orf210Q8IVY1 113 aa11.57□□□□□ -0.56
CHMP6-203ENST00000572525 TRAPPC12Q8WVT3 735 aa11.57□□□□□ -0.56
CHMP6-203ENST00000572525 HINFPQ9BQA5 517 aa11.57□□□□□ -0.56
CHMP6-203ENST00000572525 CDHR5Q9HBB8 845 aa11.57□□□□□ -0.56
CHMP6-203ENST00000572525 PCDHB15Q9Y5E8 787 aa11.57□□□□□ -0.56
CHMP6-203ENST00000572525 TDRD15B5MCY1 1934 aaKnown RBP11.56□□□□□ -0.56
CHMP6-203ENST00000572525 A0A0U1RQF3 1178 aa11.56□□□□□ -0.56
CHMP6-203ENST00000572525 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.56□□□□□ -0.56
CHMP6-203ENST00000572525 KRBA1A5PL33 1030 aa11.56□□□□□ -0.56
CHMP6-203ENST00000572525 KINO60870 393 aaKnown RBP11.56□□□□□ -0.56
CHMP6-203ENST00000572525 WEE2P0C1S8 567 aa11.56□□□□□ -0.56
CHMP6-203ENST00000572525 ZSCAN20P17040 1043 aaPredicted RBP11.56□□□□□ -0.56
CHMP6-203ENST00000572525 LMNB2Q03252 620 aa11.56□□□□□ -0.56
CHMP6-203ENST00000572525 CLLU1OSQ5K130 101 aa11.56□□□□□ -0.56
CHMP6-203ENST00000572525 CYB5R4Q7L1T6 521 aa11.56□□□□□ -0.56
CHMP6-203ENST00000572525 ZNF598Q86UK7 904 aaKnown RBP11.56□□□□□ -0.56
CHMP6-203ENST00000572525 VPS52Q8N1B4 723 aa11.56□□□□□ -0.56
CHMP6-203ENST00000572525 RRP36Q96EU6 259 aaKnown RBP11.56□□□□□ -0.56
CHMP6-203ENST00000572525 SDF4Q9BRK5 362 aa11.56□□□□□ -0.56
CHMP6-203ENST00000572525 RTKNQ9BST9 563 aa11.56□□□□□ -0.56
CHMP6-203ENST00000572525 TBC1D17Q9HA65 648 aa11.56□□□□□ -0.56
CHMP6-203ENST00000572525 KCNH7Q9NS40 1196 aa11.56□□□□□ -0.56
CHMP6-203ENST00000572525 EPS15L1Q9UBC2 864 aa11.56□□□□□ -0.56
CHMP6-203ENST00000572525 ZZEF1O43149 2961 aa11.56□□□□□ -0.56
CHMP6-203ENST00000572525 ERICH2A1L162 156 aa11.55□□□□□ -0.56
CHMP6-203ENST00000572525 GPR32O75388 356 aa11.55□□□□□ -0.56
CHMP6-203ENST00000572525 C1RP00736 705 aa11.55□□□□□ -0.56
CHMP6-203ENST00000572525 EPCAMP16422 314 aa11.55□□□□□ -0.56
CHMP6-203ENST00000572525 PBX3P40426 434 aa11.55□□□□□ -0.56
CHMP6-203ENST00000572525 TRDNQ13061 729 aa11.55□□□□□ -0.56
CHMP6-203ENST00000572525 SART3Q15020 963 aaKnown RBP11.55□□□□□ -0.56
CHMP6-203ENST00000572525 ST3GAL2Q16842 350 aa11.55□□□□□ -0.56
CHMP6-203ENST00000572525 ANKRD45Q5TZF3 282 aa11.55□□□□□ -0.56
CHMP6-203ENST00000572525 FAM160B1Q5W0V3 765 aa11.55□□□□□ -0.56
CHMP6-203ENST00000572525 TMC5Q6UXY8 1006 aa11.55□□□□□ -0.56
CHMP6-203ENST00000572525 C12orf76Q8N812 135 aaPredicted RBP11.55□□□□□ -0.56
CHMP6-203ENST00000572525 TMEM87AQ8NBN3 555 aa11.55□□□□□ -0.56
CHMP6-203ENST00000572525 STAMQ92783 540 aa11.55□□□□□ -0.56
CHMP6-203ENST00000572525 OSMRQ99650 979 aa11.55□□□□□ -0.56
CHMP6-203ENST00000572525 MXRA8Q9BRK3 442 aa11.55□□□□□ -0.56
CHMP6-203ENST00000572525 LZTS2Q9BRK4 669 aa11.55□□□□□ -0.56
CHMP6-203ENST00000572525 TRAIPQ9BWF2 469 aa11.55□□□□□ -0.56
CHMP6-203ENST00000572525 PSTPIP2Q9H939 334 aa11.55□□□□□ -0.56
CHMP6-203ENST00000572525 SEC63Q9UGP8 760 aaKnown RBP11.55□□□□□ -0.56
CHMP6-203ENST00000572525 DPP7Q9UHL4 492 aa11.55□□□□□ -0.56
CHMP6-203ENST00000572525 FBXO4Q9UKT5 387 aa11.55□□□□□ -0.56
CHMP6-203ENST00000572525 GINS2Q9Y248 185 aa11.55□□□□□ -0.56
CHMP6-203ENST00000572525 FRYQ5TBA9 3013 aa11.54□□□□□ -0.56
CHMP6-203ENST00000572525 SPAG17Q6Q759 2223 aa11.54□□□□□ -0.56
CHMP6-203ENST00000572525 SPDYE3A6NKU9 549 aa11.54□□□□□ -0.56
CHMP6-203ENST00000572525 ZBTB42B2RXF5 422 aa11.54□□□□□ -0.56
CHMP6-203ENST00000572525 C22orf31O95567 290 aa11.54□□□□□ -0.56
CHMP6-203ENST00000572525 ADRB1P08588 477 aa11.54□□□□□ -0.56
CHMP6-203ENST00000572525 ARP10275 920 aa11.54□□□□□ -0.56
CHMP6-203ENST00000572525 RFX1P22670 979 aa11.54□□□□□ -0.56
CHMP6-203ENST00000572525 KIF5BP33176 963 aa11.54□□□□□ -0.56
CHMP6-203ENST00000572525 MAGEA9P43362 315 aa11.54□□□□□ -0.56
CHMP6-203ENST00000572525 CLCN4P51793 760 aa11.54□□□□□ -0.56
CHMP6-203ENST00000572525 ATXN1P54253 815 aaKnown RBP11.54□□□□□ -0.56
CHMP6-203ENST00000572525 BCAR1P56945 870 aa11.54□□□□□ -0.56
CHMP6-203ENST00000572525 VARS2Q5ST30 1063 aaKnown RBP11.54□□□□□ -0.56
CHMP6-203ENST00000572525 ELMSAN1Q6PJG2 1045 aa11.54□□□□□ -0.56
CHMP6-203ENST00000572525 IGSF21Q96ID5 467 aa11.54□□□□□ -0.56
CHMP6-203ENST00000572525 OSBPL3Q9H4L5 887 aa11.54□□□□□ -0.56
CHMP6-203ENST00000572525 WDR6Q9NNW5 1121 aaKnown RBP11.54□□□□□ -0.56
CHMP6-203ENST00000572525 SLC2A4RGQ9NR83 387 aa11.54□□□□□ -0.56
CHMP6-203ENST00000572525 DIAPH3Q9NSV4 1193 aa11.54□□□□□ -0.56
CHMP6-203ENST00000572525 DACT1Q9NYF0 836 aa11.54□□□□□ -0.56
CHMP6-203ENST00000572525 CEP131Q9UPN4 1083 aa11.54□□□□□ -0.56
CHMP6-203ENST00000572525 SIT1Q9Y3P8 196 aa11.54□□□□□ -0.56
CHMP6-203ENST00000572525 PCDHGA2Q9Y5H1 932 aa11.54□□□□□ -0.56
CHMP6-203ENST00000572525 IFIT3O14879 490 aaKnown RBP11.53□□□□□ -0.56
CHMP6-203ENST00000572525 MAGEB2O15479 319 aa11.53□□□□□ -0.56
CHMP6-203ENST00000572525 IBSPP21815 317 aaPredicted RBP11.53□□□□□ -0.56
CHMP6-203ENST00000572525 EIF4BP23588 611 aaKnown RBP11.53□□□□□ -0.56
CHMP6-203ENST00000572525 GNAQP50148 359 aa11.53□□□□□ -0.56
CHMP6-203ENST00000572525 METAP2P50579 478 aaKnown RBP eCLIP11.53□□□□□ -0.56
CHMP6-203ENST00000572525 STARD6P59095 220 aa11.53□□□□□ -0.56
CHMP6-203ENST00000572525 WTAPQ15007 396 aa11.53□□□□□ -0.56
CHMP6-203ENST00000572525 PTPN14Q15678 1187 aa11.53□□□□□ -0.56
CHMP6-203ENST00000572525 KIZQ2M2Z5 673 aa11.53□□□□□ -0.56
CHMP6-203ENST00000572525 CWC27Q6UX04 472 aaKnown RBP11.53□□□□□ -0.56
CHMP6-203ENST00000572525 ABHD15Q6UXT9 468 aa11.53□□□□□ -0.56
CHMP6-203ENST00000572525 NIPA1Q7RTP0 329 aa11.53□□□□□ -0.56
CHMP6-203ENST00000572525 CATIPQ7Z7H3 387 aa11.53□□□□□ -0.56
CHMP6-203ENST00000572525 SLC44A3Q8N4M1 653 aa11.53□□□□□ -0.56
CHMP6-203ENST00000572525 DCLK2Q8N568 766 aa11.53□□□□□ -0.56
CHMP6-203ENST00000572525 PJA1Q8NG27 643 aa11.53□□□□□ -0.56
CHMP6-203ENST00000572525 BBXQ8WY36 941 aaPredicted RBP11.53□□□□□ -0.56
CHMP6-203ENST00000572525 RIN2Q8WYP3 895 aaPredicted RBP11.53□□□□□ -0.56
CHMP6-203ENST00000572525 SECISBP2LQ93073 1101 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms