RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 CDHR5Q9HBB8 845 aa14.96□□□□□ -0.01
CCDC40-208ENST00000572270 RNF19AQ9NV58 838 aa14.96□□□□□ -0.01
CCDC40-208ENST00000572270 MAD2L2Q9UI95 211 aa14.96□□□□□ -0.01
CCDC40-208ENST00000572270 PKD1L2Q7Z442 2459 aa14.95□□□□□ -0.02
CCDC40-208ENST00000572270 CARNS1A5YM72 827 aa14.95□□□□□ -0.02
CCDC40-208ENST00000572270 GLULP15104 373 aa14.95□□□□□ -0.02
CCDC40-208ENST00000572270 ZSCAN20P17040 1043 aaPredicted RBP14.95□□□□□ -0.02
CCDC40-208ENST00000572270 MX1P20591 662 aa14.95□□□□□ -0.02
CCDC40-208ENST00000572270 KLRC1P26715 233 aa14.95□□□□□ -0.02
CCDC40-208ENST00000572270 BCAR1P56945 870 aa14.95□□□□□ -0.02
CCDC40-208ENST00000572270 MTMR1Q13613 665 aa14.95□□□□□ -0.02
CCDC40-208ENST00000572270 PPP1R16BQ96T49 567 aa14.95□□□□□ -0.02
CCDC40-208ENST00000572270 PCYT2Q99447 389 aa14.95□□□□□ -0.02
CCDC40-208ENST00000572270 OSMRQ99650 979 aa14.95□□□□□ -0.02
CCDC40-208ENST00000572270 EMILIN2Q9BXX0 1053 aa14.95□□□□□ -0.02
CCDC40-208ENST00000572270 JPH1Q9HDC5 661 aaPredicted RBP14.95□□□□□ -0.02
CCDC40-208ENST00000572270 ZSCAN32Q9NX65 697 aa14.95□□□□□ -0.02
CCDC40-208ENST00000572270 EPS15L1Q9UBC2 864 aa14.95□□□□□ -0.02
CCDC40-208ENST00000572270 PNMA6FA0A0J9YX94 578 aa14.94□□□□□ -0.02
CCDC40-208ENST00000572270 SLC30A4O14863 429 aa14.94□□□□□ -0.02
CCDC40-208ENST00000572270 TBC1D4O60343 1298 aa14.94□□□□□ -0.02
CCDC40-208ENST00000572270 N4BP1O75113 896 aaKnown RBP14.94□□□□□ -0.02
CCDC40-208ENST00000572270 ZC3H11AO75152 810 aaKnown RBP eCLIP14.94□□□□□ -0.02
CCDC40-208ENST00000572270 KLRC2P26717 231 aa14.94□□□□□ -0.02
CCDC40-208ENST00000572270 CRYBB1P53674 252 aaPredicted RBP14.94□□□□□ -0.02
CCDC40-208ENST00000572270 DSC3Q14574 896 aa14.94□□□□□ -0.02
CCDC40-208ENST00000572270 PLPPR4Q7Z2D5 763 aa14.94□□□□□ -0.02
CCDC40-208ENST00000572270 ZNF589Q86UQ0 364 aaPredicted RBP14.94□□□□□ -0.02
CCDC40-208ENST00000572270 ECHDC2Q86YB7 292 aa14.94□□□□□ -0.02
CCDC40-208ENST00000572270 SLC9A2Q9UBY0 812 aa14.94□□□□□ -0.02
CCDC40-208ENST00000572270 RAB23Q9ULC3 237 aa14.94□□□□□ -0.02
CCDC40-208ENST00000572270 CLUHO75153 1309 aa14.93□□□□□ -0.02
CCDC40-208ENST00000572270 PALM3A6NDB9 673 aaPredicted RBP14.93□□□□□ -0.02
CCDC40-208ENST00000572270 LRRN2O75325 713 aa14.93□□□□□ -0.02
CCDC40-208ENST00000572270 STAT5BP51692 787 aa14.93□□□□□ -0.02
CCDC40-208ENST00000572270 CLCN4P51793 760 aa14.93□□□□□ -0.02
CCDC40-208ENST00000572270 MFAP1P55081 439 aaKnown RBP14.93□□□□□ -0.02
CCDC40-208ENST00000572270 STARD6P59095 220 aa14.93□□□□□ -0.02
CCDC40-208ENST00000572270 KIZQ2M2Z5 673 aa14.93□□□□□ -0.02
CCDC40-208ENST00000572270 CLLU1OSQ5K130 101 aa14.93□□□□□ -0.02
CCDC40-208ENST00000572270 ELMSAN1Q6PJG2 1045 aa14.93□□□□□ -0.02
CCDC40-208ENST00000572270 DDX53Q86TM3 631 aaKnown RBP14.93□□□□□ -0.02
CCDC40-208ENST00000572270 KIAA0319LQ8IZA0 1049 aa14.93□□□□□ -0.02
CCDC40-208ENST00000572270 ZBTB44Q8NCP5 570 aa14.93□□□□□ -0.02
CCDC40-208ENST00000572270 HELQQ8TDG4 1101 aa14.93□□□□□ -0.02
CCDC40-208ENST00000572270 OTUD7AQ8TE49 926 aaPredicted RBP14.93□□□□□ -0.02
CCDC40-208ENST00000572270 RIOX1Q9H6W3 641 aa14.93□□□□□ -0.02
CCDC40-208ENST00000572270 WDR6Q9NNW5 1121 aaKnown RBP14.93□□□□□ -0.02
CCDC40-208ENST00000572270 PARD6AQ9NPB6 346 aa14.93□□□□□ -0.02
CCDC40-208ENST00000572270 SLC2A4RGQ9NR83 387 aa14.93□□□□□ -0.02
CCDC40-208ENST00000572270 ZSWIM5Q9P217 1185 aa14.93□□□□□ -0.02
CCDC40-208ENST00000572270 EVPLQ92817 2033 aa14.92□□□□□ -0.02
CCDC40-208ENST00000572270 HOXB3P14651 431 aaPredicted RBP14.92□□□□□ -0.02
CCDC40-208ENST00000572270 ITGB5P18084 799 aa14.92□□□□□ -0.02
CCDC40-208ENST00000572270 TGM1P22735 817 aa14.92□□□□□ -0.02
CCDC40-208ENST00000572270 MAGEA9P43362 315 aa14.92□□□□□ -0.02
CCDC40-208ENST00000572270 SLC26A2P50443 739 aa14.92□□□□□ -0.02
CCDC40-208ENST00000572270 USP17L6PQ6QN14 398 aa14.92□□□□□ -0.02
CCDC40-208ENST00000572270 CYP26C1Q6V0L0 522 aa14.92□□□□□ -0.02
CCDC40-208ENST00000572270 CMASQ8NFW8 434 aaPredicted RBP14.92□□□□□ -0.02
CCDC40-208ENST00000572270 DDX1Q92499 740 aaKnown RBP14.92□□□□□ -0.02
CCDC40-208ENST00000572270 BAZ2BQ9UIF8 2168 aaKnown RBP14.92□□□□□ -0.02
CCDC40-208ENST00000572270 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.91□□□□□ -0.02
CCDC40-208ENST00000572270 KANSL1LA0AUZ9 987 aa14.91□□□□□ -0.02
CCDC40-208ENST00000572270 MAFGO15525 162 aa14.91□□□□□ -0.02
CCDC40-208ENST00000572270 HBP1O60381 514 aa14.91□□□□□ -0.02
CCDC40-208ENST00000572270 LILRB5O75023 590 aa14.91□□□□□ -0.02
CCDC40-208ENST00000572270 SPEM2Q0P670 501 aa14.91□□□□□ -0.02
CCDC40-208ENST00000572270 UBXN2BQ14CS0 331 aa14.91□□□□□ -0.02
CCDC40-208ENST00000572270 TMEM173Q86WV6 379 aaPredicted RBP14.91□□□□□ -0.02
CCDC40-208ENST00000572270 IGSF21Q96ID5 467 aa14.91□□□□□ -0.02
CCDC40-208ENST00000572270 MYADMQ96S97 322 aa14.91□□□□□ -0.02
CCDC40-208ENST00000572270 KRT23Q9C075 422 aa14.91□□□□□ -0.02
CCDC40-208ENST00000572270 MAN1C1Q9NR34 630 aa14.91□□□□□ -0.02
CCDC40-208ENST00000572270 DPP7Q9UHL4 492 aa14.91□□□□□ -0.02
CCDC40-208ENST00000572270 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.91□□□□□ -0.02
CCDC40-208ENST00000572270 ASPMQ8IZT6 3477 aa14.91□□□□□ -0.02
CCDC40-208ENST00000572270 COL1A2P08123 1366 aa14.9□□□□□ -0.02
CCDC40-208ENST00000572270 CCDC195A0A1B0GUA6 201 aa14.9□□□□□ -0.02
CCDC40-208ENST00000572270 PIK3CDO00329 1044 aa14.9□□□□□ -0.02
CCDC40-208ENST00000572270 ACTR2P61160 394 aa14.9□□□□□ -0.02
CCDC40-208ENST00000572270 NMIQ13287 307 aaPredicted RBP14.9□□□□□ -0.02
CCDC40-208ENST00000572270 PIBF1Q8WXW3 757 aa14.9□□□□□ -0.02
CCDC40-208ENST00000572270 RSPH1Q8WYR4 309 aa14.9□□□□□ -0.02
CCDC40-208ENST00000572270 KLHL5Q96PQ7 755 aa14.9□□□□□ -0.02
CCDC40-208ENST00000572270 SDF4Q9BRK5 362 aa14.9□□□□□ -0.02
CCDC40-208ENST00000572270 STK39Q9UEW8 545 aa14.9□□□□□ -0.02
CCDC40-208ENST00000572270 UBIAD1Q9Y5Z9 338 aa14.9□□□□□ -0.02
CCDC40-208ENST00000572270 CCER2I3L3R5 266 aa14.89□□□□□ -0.03
CCDC40-208ENST00000572270 MEIS2O14770 477 aa14.89□□□□□ -0.03
CCDC40-208ENST00000572270 INPPL1O15357 1258 aa14.89□□□□□ -0.03
CCDC40-208ENST00000572270 CYTH3O43739 400 aa14.89□□□□□ -0.03
CCDC40-208ENST00000572270 VTNP04004 478 aa14.89□□□□□ -0.03
CCDC40-208ENST00000572270 GRM4Q14833 912 aa14.89□□□□□ -0.03
CCDC40-208ENST00000572270 SLC35G1Q2M3R5 365 aa14.89□□□□□ -0.03
CCDC40-208ENST00000572270 GET4Q7L5D6 327 aaPredicted RBP14.89□□□□□ -0.03
CCDC40-208ENST00000572270 BBXQ8WY36 941 aaPredicted RBP14.89□□□□□ -0.03
CCDC40-208ENST00000572270 RHOBTB2Q9BYZ6 727 aa14.89□□□□□ -0.03
CCDC40-208ENST00000572270 CNNM2Q9H8M5 875 aa14.89□□□□□ -0.03
CCDC40-208ENST00000572270 JADE2Q9NQC1 790 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms