RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 ADAM2Q99965 735 aa11.45□□□□□ -0.58
GTF3C1-213ENST00000571886 RC3H2Q9HBD1 1191 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-213ENST00000571886 XPNPEP1Q9NQW7 623 aa11.45□□□□□ -0.58
GTF3C1-213ENST00000571886 PRDM6Q9NQX0 595 aa11.45□□□□□ -0.58
GTF3C1-213ENST00000571886 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-213ENST00000571886 NOL7Q9UMY1 257 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-213ENST00000571886 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.45□□□□□ -0.58
GTF3C1-213ENST00000571886 PRRC2BQ5JSZ5 2229 aaKnown RBP11.44□□□□□ -0.58
GTF3C1-213ENST00000571886 COL4A4P53420 1690 aaPredicted RBP11.44□□□□□ -0.58
GTF3C1-213ENST00000571886 C9IYK1 514 aa11.44□□□□□ -0.58
GTF3C1-213ENST00000571886 H3BQV1 296 aa11.44□□□□□ -0.58
GTF3C1-213ENST00000571886 GPR182O15218 404 aa11.44□□□□□ -0.58
GTF3C1-213ENST00000571886 DKC1O60832 514 aaKnown RBP eCLIP11.44□□□□□ -0.58
GTF3C1-213ENST00000571886 DGKIO75912 1065 aa11.44□□□□□ -0.58
GTF3C1-213ENST00000571886 LYPLA2O95372 231 aa11.44□□□□□ -0.58
GTF3C1-213ENST00000571886 DARSP14868 501 aaKnown RBP11.44□□□□□ -0.58
GTF3C1-213ENST00000571886 EIF4BP23588 611 aaKnown RBP11.44□□□□□ -0.58
GTF3C1-213ENST00000571886 GRB10Q13322 594 aa11.44□□□□□ -0.58
GTF3C1-213ENST00000571886 CCDC85BQ15834 202 aaPredicted RBP11.44□□□□□ -0.58
GTF3C1-213ENST00000571886 OTUD6AQ7L8S5 288 aa11.44□□□□□ -0.58
GTF3C1-213ENST00000571886 GDPD5Q8WTR4 605 aa11.44□□□□□ -0.58
GTF3C1-213ENST00000571886 NLRP7Q8WX94 980 aa11.44□□□□□ -0.58
GTF3C1-213ENST00000571886 TGS1Q96RS0 853 aaKnown RBP11.44□□□□□ -0.58
GTF3C1-213ENST00000571886 YME1L1Q96TA2 773 aa11.44□□□□□ -0.58
GTF3C1-213ENST00000571886 GAS2L1Q99501 681 aaPredicted RBP11.44□□□□□ -0.58
GTF3C1-213ENST00000571886 FTHL17Q9BXU8 183 aa11.44□□□□□ -0.58
GTF3C1-213ENST00000571886 RGS18Q9NS28 235 aa11.44□□□□□ -0.58
GTF3C1-213ENST00000571886 FNDC1Q4ZHG4 1894 aaPredicted RBP11.44□□□□□ -0.58
GTF3C1-213ENST00000571886 EYSQ5T1H1 3165 aa11.44□□□□□ -0.58
GTF3C1-213ENST00000571886 PP2D1A8MPX8 630 aa11.43□□□□□ -0.58
GTF3C1-213ENST00000571886 CDC25AP30304 524 aa11.43□□□□□ -0.58
GTF3C1-213ENST00000571886 SARSP49591 514 aaKnown RBP11.43□□□□□ -0.58
GTF3C1-213ENST00000571886 RARRES1P49788 294 aa11.43□□□□□ -0.58
GTF3C1-213ENST00000571886 POLGP54098 1239 aaPredicted RBP11.43□□□□□ -0.58
GTF3C1-213ENST00000571886 FAM189BP81408 668 aa11.43□□□□□ -0.58
GTF3C1-213ENST00000571886 ORC2Q13416 577 aaPredicted RBP11.43□□□□□ -0.58
GTF3C1-213ENST00000571886 FAM102BQ5T8I3 360 aa11.43□□□□□ -0.58
GTF3C1-213ENST00000571886 POTEGQ6S5H5 508 aa11.43□□□□□ -0.58
GTF3C1-213ENST00000571886 NEK9Q8TD19 979 aa11.43□□□□□ -0.58
GTF3C1-213ENST00000571886 PRPF31Q8WWY3 499 aaKnown RBP11.43□□□□□ -0.58
GTF3C1-213ENST00000571886 NLRP4Q96MN2 994 aa11.43□□□□□ -0.58
GTF3C1-213ENST00000571886 POLR3CQ9BUI4 534 aaPredicted RBP11.43□□□□□ -0.58
GTF3C1-213ENST00000571886 MINDY3Q9H8M7 445 aa11.43□□□□□ -0.58
GTF3C1-213ENST00000571886 IFT122Q9HBG6 1241 aa11.43□□□□□ -0.58
GTF3C1-213ENST00000571886 TUFT1Q9NNX1 390 aa11.43□□□□□ -0.58
GTF3C1-213ENST00000571886 ANKEF1Q9NU02 776 aa11.43□□□□□ -0.58
GTF3C1-213ENST00000571886 KIF3AQ9Y496 699 aa11.43□□□□□ -0.58
GTF3C1-213ENST00000571886 MTCH2Q9Y6C9 303 aa11.43□□□□□ -0.58
GTF3C1-213ENST00000571886 KIAA1671Q9BY89 1806 aa11.43□□□□□ -0.58
GTF3C1-213ENST00000571886 DENND3A2RUS2 1198 aa11.42□□□□□ -0.58
GTF3C1-213ENST00000571886 SRGAP2CP0DJJ0 459 aa11.42□□□□□ -0.58
GTF3C1-213ENST00000571886 RPA1P27694 616 aa11.42□□□□□ -0.58
GTF3C1-213ENST00000571886 RFC5P40937 340 aa11.42□□□□□ -0.58
GTF3C1-213ENST00000571886 DNM2P50570 870 aa11.42□□□□□ -0.58
GTF3C1-213ENST00000571886 FXR2P51116 673 aaKnown RBP eCLIP11.42□□□□□ -0.58
GTF3C1-213ENST00000571886 LAMTOR4Q0VGL1 99 aa11.42□□□□□ -0.58
GTF3C1-213ENST00000571886 EMC2Q15006 297 aa11.42□□□□□ -0.58
GTF3C1-213ENST00000571886 PAN2Q504Q3 1202 aaKnown RBP11.42□□□□□ -0.58
GTF3C1-213ENST00000571886 EPC2Q52LR7 807 aa11.42□□□□□ -0.58
GTF3C1-213ENST00000571886 SLC24A5Q71RS6 500 aa11.42□□□□□ -0.58
GTF3C1-213ENST00000571886 MAEAQ7L5Y9 396 aa11.42□□□□□ -0.58
GTF3C1-213ENST00000571886 FERMT3Q86UX7 667 aa11.42□□□□□ -0.58
GTF3C1-213ENST00000571886 NPAS4Q8IUM7 802 aa11.42□□□□□ -0.58
GTF3C1-213ENST00000571886 ASAP3Q8TDY4 903 aa11.42□□□□□ -0.58
GTF3C1-213ENST00000571886 SLC7A3Q8WY07 619 aa11.42□□□□□ -0.58
GTF3C1-213ENST00000571886 SCLT1Q96NL6 688 aa11.42□□□□□ -0.58
GTF3C1-213ENST00000571886 MTRQ99707 1265 aa11.42□□□□□ -0.58
GTF3C1-213ENST00000571886 MMTAG2Q9BU76 263 aaKnown RBP11.42□□□□□ -0.58
GTF3C1-213ENST00000571886 GCOM2Q9BZD3 368 aaPredicted RBP11.42□□□□□ -0.58
GTF3C1-213ENST00000571886 POLD4Q9HCU8 107 aa11.42□□□□□ -0.58
GTF3C1-213ENST00000571886 GPRC5CQ9NQ84 441 aa11.42□□□□□ -0.58
GTF3C1-213ENST00000571886 RNF19AQ9NV58 838 aa11.42□□□□□ -0.58
GTF3C1-213ENST00000571886 HCSTQ9UBK5 93 aa11.42□□□□□ -0.58
GTF3C1-213ENST00000571886 COL4A3BPQ9Y5P4 624 aa11.42□□□□□ -0.58
GTF3C1-213ENST00000571886 ADGRA3Q8IWK6 1321 aa11.41□□□□□ -0.58
GTF3C1-213ENST00000571886 ATG2AQ2TAZ0 1938 aa11.41□□□□□ -0.58
GTF3C1-213ENST00000571886 RALGAPA2Q2PPJ7 1873 aa11.41□□□□□ -0.58
GTF3C1-213ENST00000571886 K7ELQ4 463 aaPredicted RBP11.41□□□□□ -0.58
GTF3C1-213ENST00000571886 USO1O60763 962 aaKnown RBP11.41□□□□□ -0.58
GTF3C1-213ENST00000571886 FGFR1P11362 822 aa11.41□□□□□ -0.58
GTF3C1-213ENST00000571886 POU3F3P20264 500 aaPredicted RBP11.41□□□□□ -0.58
GTF3C1-213ENST00000571886 SYT1P21579 422 aa11.41□□□□□ -0.58
GTF3C1-213ENST00000571886 ARL2P36404 184 aa11.41□□□□□ -0.58
GTF3C1-213ENST00000571886 ATP2C1P98194 919 aaPredicted RBP11.41□□□□□ -0.58
GTF3C1-213ENST00000571886 RILPL1Q5EBL4 403 aa11.41□□□□□ -0.58
GTF3C1-213ENST00000571886 ODR4Q5SWX8 454 aa11.41□□□□□ -0.58
GTF3C1-213ENST00000571886 FAM173BQ6P4H8 233 aa11.41□□□□□ -0.58
GTF3C1-213ENST00000571886 TMEM192Q8IY95 271 aa11.41□□□□□ -0.58
GTF3C1-213ENST00000571886 MICALL1Q8N3F8 863 aa11.41□□□□□ -0.58
GTF3C1-213ENST00000571886 IGSF22Q8N9C0 903 aa11.41□□□□□ -0.58
GTF3C1-213ENST00000571886 SLC17A8Q8NDX2 589 aa11.41□□□□□ -0.58
GTF3C1-213ENST00000571886 PSPC1Q8WXF1 523 aaKnown RBP11.41□□□□□ -0.58
GTF3C1-213ENST00000571886 SNX21Q969T3 373 aa11.41□□□□□ -0.58
GTF3C1-213ENST00000571886 JPH2Q9BR39 696 aaPredicted RBP11.41□□□□□ -0.58
GTF3C1-213ENST00000571886 LRWD1Q9UFC0 647 aa11.41□□□□□ -0.58
GTF3C1-213ENST00000571886 PPME1Q9Y570 386 aa11.41□□□□□ -0.58
GTF3C1-213ENST00000571886 PCDHB7Q9Y5E2 793 aa11.41□□□□□ -0.58
GTF3C1-213ENST00000571886 MRPL42Q9Y6G3 142 aaKnown RBP11.41□□□□□ -0.58
GTF3C1-213ENST00000571886 MYO7AQ13402 2215 aa11.4□□□□□ -0.58
GTF3C1-213ENST00000571886 VPS37CA5D8V6 355 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms