RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 SUGCTQ9HAC7 445 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 OLFML3Q9NRN5 406 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 SETD4Q9NVD3 440 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 LARSQ9P2J5 1176 aaKnown RBP17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 NRCAMQ92823 1304 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 IGKV6-21A0A0C4DH24 114 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 C17orf102A2RUQ5 167 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 MOXD2PA6NHM9 499 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 KBTBD13C9JR72 458 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 CABYRO75952 493 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 KLRC1P26715 233 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 DMP1Q13316 513 aaPredicted RBP17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 L1TD1Q5T7N2 865 aaKnown RBP17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 KLHL10Q6JEL2 608 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 MTHFD1LQ6UB35 978 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 GAS2L3Q86XJ1 694 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 FAM178BQ8IXR5 827 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 METTL13Q8N6R0 699 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 ASAP3Q8TDY4 903 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 ARMC5Q96C12 935 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 ZBTB10Q96DT7 871 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 ZNF333Q96JL9 665 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 IFT74Q96LB3 600 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 FGFBP2Q9BYJ0 223 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 MAPK8IP1Q9UQF2 711 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 PCDHA2Q9Y5H9 948 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 FRMPD3Q5JV73 1810 aa17.03■□□□□ 0.32
HERPUD1-219ENST00000570273 K7ENM7 598 aa17.03■□□□□ 0.32
HERPUD1-219ENST00000570273 GCNT3O95395 438 aa17.03■□□□□ 0.32
HERPUD1-219ENST00000570273 CAVIN2O95810 425 aa17.03■□□□□ 0.32
HERPUD1-219ENST00000570273 CD44P16070 742 aaKnown RBP17.03■□□□□ 0.32
HERPUD1-219ENST00000570273 ARL2P36404 184 aa17.03■□□□□ 0.32
HERPUD1-219ENST00000570273 CLCN3P51790 818 aa17.03■□□□□ 0.32
HERPUD1-219ENST00000570273 ACLYP53396 1101 aa17.03■□□□□ 0.32
HERPUD1-219ENST00000570273 PEX3P56589 373 aa17.03■□□□□ 0.32
HERPUD1-219ENST00000570273 RTP1P59025 263 aa17.03■□□□□ 0.32
HERPUD1-219ENST00000570273 NBPF20Q3BBV1 942 aa17.03■□□□□ 0.32
HERPUD1-219ENST00000570273 FAM47CQ5HY64 1035 aa17.03■□□□□ 0.32
HERPUD1-219ENST00000570273 IER5Q5VY09 327 aa17.03■□□□□ 0.32
HERPUD1-219ENST00000570273 EFCAB12Q6NXP0 572 aa17.03■□□□□ 0.32
HERPUD1-219ENST00000570273 ADSSL1Q8N142 457 aa17.03■□□□□ 0.32
HERPUD1-219ENST00000570273 GLIS3Q8NEA6 775 aa17.03■□□□□ 0.32
HERPUD1-219ENST00000570273 FAM200AQ8TCP9 573 aa17.03■□□□□ 0.32
HERPUD1-219ENST00000570273 PSPC1Q8WXF1 523 aaKnown RBP17.03■□□□□ 0.32
HERPUD1-219ENST00000570273 BSNDQ8WZ55 320 aa17.03■□□□□ 0.32
HERPUD1-219ENST00000570273 TSEN34Q9BSV6 310 aaKnown RBP17.03■□□□□ 0.32
HERPUD1-219ENST00000570273 HDAC6Q9UBN7 1215 aa17.03■□□□□ 0.32
HERPUD1-219ENST00000570273 CTNND2Q9UQB3 1225 aa17.03■□□□□ 0.32
HERPUD1-219ENST00000570273 CCDC169A6NNP5 214 aa17.02■□□□□ 0.31
HERPUD1-219ENST00000570273 PPP1R3GB7ZBB8 358 aa17.02■□□□□ 0.31
HERPUD1-219ENST00000570273 MYBP10242 640 aa17.02■□□□□ 0.31
HERPUD1-219ENST00000570273 NMT1P30419 496 aaKnown RBP17.02■□□□□ 0.31
HERPUD1-219ENST00000570273 PPP1R2P41236 205 aa17.02■□□□□ 0.31
HERPUD1-219ENST00000570273 PRCPP42785 496 aa17.02■□□□□ 0.31
HERPUD1-219ENST00000570273 ZNF165P49910 485 aa17.02■□□□□ 0.31
HERPUD1-219ENST00000570273 DNM2P50570 870 aa17.02■□□□□ 0.31
HERPUD1-219ENST00000570273 DRP2Q13474 957 aa17.02■□□□□ 0.31
HERPUD1-219ENST00000570273 PPP2R5AQ15172 486 aa17.02■□□□□ 0.31
HERPUD1-219ENST00000570273 COBLL1Q53SF7 1204 aa17.02■□□□□ 0.31
HERPUD1-219ENST00000570273 MARCH8Q5T0T0 291 aa17.02■□□□□ 0.31
HERPUD1-219ENST00000570273 NFRKBQ6P4R8 1299 aa17.02■□□□□ 0.31
HERPUD1-219ENST00000570273 STXBP4Q6ZWJ1 553 aa17.02■□□□□ 0.31
HERPUD1-219ENST00000570273 MYOCDQ8IZQ8 938 aa17.02■□□□□ 0.31
HERPUD1-219ENST00000570273 VTI1AQ96AJ9 217 aa17.02■□□□□ 0.31
HERPUD1-219ENST00000570273 C17orf75Q9HAS0 396 aa17.02■□□□□ 0.31
HERPUD1-219ENST00000570273 SUCLA2Q9P2R7 463 aaPredicted RBP17.02■□□□□ 0.31
HERPUD1-219ENST00000570273 PSMA7O14818 248 aa17.01■□□□□ 0.31
HERPUD1-219ENST00000570273 KIF20AO95235 890 aa17.01■□□□□ 0.31
HERPUD1-219ENST00000570273 MAPTP10636 758 aaKnown RBP17.01■□□□□ 0.31
HERPUD1-219ENST00000570273 GNAT1P11488 350 aa17.01■□□□□ 0.31
HERPUD1-219ENST00000570273 GLRA2P23416 452 aa17.01■□□□□ 0.31
HERPUD1-219ENST00000570273 TMOD1P28289 359 aa17.01■□□□□ 0.31
HERPUD1-219ENST00000570273 NPTX2P47972 431 aa17.01■□□□□ 0.31
HERPUD1-219ENST00000570273 CASP5P51878 434 aa17.01■□□□□ 0.31
HERPUD1-219ENST00000570273 SMTNP53814 917 aa17.01■□□□□ 0.31
HERPUD1-219ENST00000570273 PAK1Q13153 545 aa17.01■□□□□ 0.31
HERPUD1-219ENST00000570273 MKRN4PQ13434 485 aaPredicted RBP17.01■□□□□ 0.31
HERPUD1-219ENST00000570273 GUF1Q8N442 669 aaKnown RBP17.01■□□□□ 0.31
HERPUD1-219ENST00000570273 LINC01465Q8N7H1 131 aa17.01■□□□□ 0.31
HERPUD1-219ENST00000570273 RNF214Q8ND24 703 aa17.01■□□□□ 0.31
HERPUD1-219ENST00000570273 SLC17A8Q8NDX2 589 aa17.01■□□□□ 0.31
HERPUD1-219ENST00000570273 SPIRE2Q8WWL2 714 aa17.01■□□□□ 0.31
HERPUD1-219ENST00000570273 NELFBQ8WX92 580 aa17.01■□□□□ 0.31
HERPUD1-219ENST00000570273 ABHD8Q96I13 439 aa17.01■□□□□ 0.31
HERPUD1-219ENST00000570273 GLT1D1Q96MS3 346 aa17.01■□□□□ 0.31
HERPUD1-219ENST00000570273 FIZ1Q96SL8 496 aa17.01■□□□□ 0.31
HERPUD1-219ENST00000570273 MAP7D2Q96T17 732 aa17.01■□□□□ 0.31
HERPUD1-219ENST00000570273 CBX8Q9HC52 389 aa17.01■□□□□ 0.31
HERPUD1-219ENST00000570273 KMT5AQ9NQR1 393 aa17.01■□□□□ 0.31
HERPUD1-219ENST00000570273 AKT3Q9Y243 479 aa17.01■□□□□ 0.31
HERPUD1-219ENST00000570273 SCN10AQ9Y5Y9 1956 aa17.01■□□□□ 0.31
HERPUD1-219ENST00000570273 UBE4BO95155 1302 aa17■□□□□ 0.31
HERPUD1-219ENST00000570273 MBLAC1A4D2B0 266 aaPredicted RBP17■□□□□ 0.31
HERPUD1-219ENST00000570273 LRRIQ4A6NIV6 560 aa17■□□□□ 0.31
HERPUD1-219ENST00000570273 DNM1LO00429 736 aa17■□□□□ 0.31
HERPUD1-219ENST00000570273 EIF3DO15371 548 aaKnown RBP eCLIP17■□□□□ 0.31
HERPUD1-219ENST00000570273 SLC16A4O15374 487 aa17■□□□□ 0.31
HERPUD1-219ENST00000570273 CYP2C9P11712 490 aa17■□□□□ 0.31
HERPUD1-219ENST00000570273 NCKAP1LP55160 1127 aa17■□□□□ 0.31
HERPUD1-219ENST00000570273 ALCAMQ13740 583 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms