RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 NECAB1Q8N987 351 aa19.19■□□□□ 0.66
MAP1LC3B-208ENST00000570189 SEPT9Q9UHD8 586 aaPredicted RBP19.19■□□□□ 0.66
MAP1LC3B-208ENST00000570189 PLAGL2Q9UPG8 496 aa19.19■□□□□ 0.66
MAP1LC3B-208ENST00000570189 GRM6O15303 877 aa19.18■□□□□ 0.66
MAP1LC3B-208ENST00000570189 P4HBP07237 508 aaKnown RBP19.18■□□□□ 0.66
MAP1LC3B-208ENST00000570189 NR5A1Q13285 461 aa19.18■□□□□ 0.66
MAP1LC3B-208ENST00000570189 PUS10Q3MIT2 529 aaKnown RBP19.18■□□□□ 0.66
MAP1LC3B-208ENST00000570189 TCEAL5Q5H9L2 206 aa19.18■□□□□ 0.66
MAP1LC3B-208ENST00000570189 ZNF410Q86VK4 478 aa19.18■□□□□ 0.66
MAP1LC3B-208ENST00000570189 C4orf19Q8IY42 314 aa19.18■□□□□ 0.66
MAP1LC3B-208ENST00000570189 RSPH1Q8WYR4 309 aa19.18■□□□□ 0.66
MAP1LC3B-208ENST00000570189 TRAIPQ9BWF2 469 aa19.18■□□□□ 0.66
MAP1LC3B-208ENST00000570189 HOXA2O43364 376 aa19.17■□□□□ 0.66
MAP1LC3B-208ENST00000570189 DNM2P50570 870 aa19.17■□□□□ 0.66
MAP1LC3B-208ENST00000570189 ST3GAL1Q11201 340 aa19.17■□□□□ 0.66
MAP1LC3B-208ENST00000570189 CAMK1Q14012 370 aa19.17■□□□□ 0.66
MAP1LC3B-208ENST00000570189 EPHA7Q15375 998 aa19.17■□□□□ 0.66
MAP1LC3B-208ENST00000570189 CSPP1Q1MSJ5 1256 aa19.17■□□□□ 0.66
MAP1LC3B-208ENST00000570189 CTC1Q2NKJ3 1217 aa19.17■□□□□ 0.66
MAP1LC3B-208ENST00000570189 MTERF2Q49AM1 385 aa19.17■□□□□ 0.66
MAP1LC3B-208ENST00000570189 POTEDQ86YR6 584 aa19.17■□□□□ 0.66
MAP1LC3B-208ENST00000570189 PPP1R16BQ96T49 567 aa19.17■□□□□ 0.66
MAP1LC3B-208ENST00000570189 CHST12Q9NRB3 414 aa19.17■□□□□ 0.66
MAP1LC3B-208ENST00000570189 ITGB1P05556 798 aa19.16■□□□□ 0.66
MAP1LC3B-208ENST00000570189 ZSCAN20P17040 1043 aaPredicted RBP19.16■□□□□ 0.66
MAP1LC3B-208ENST00000570189 UBE3AQ05086 875 aa19.16■□□□□ 0.66
MAP1LC3B-208ENST00000570189 DRP2Q13474 957 aa19.16■□□□□ 0.66
MAP1LC3B-208ENST00000570189 SPPL3Q8TCT6 385 aa19.16■□□□□ 0.66
MAP1LC3B-208ENST00000570189 LLPHQ9BRT6 129 aaKnown RBP19.16■□□□□ 0.66
MAP1LC3B-208ENST00000570189 GCOM2Q9BZD3 368 aaPredicted RBP19.16■□□□□ 0.66
MAP1LC3B-208ENST00000570189 TMEM117Q9H0C3 514 aa19.16■□□□□ 0.66
MAP1LC3B-208ENST00000570189 DHX33Q9H6R0 707 aaKnown RBP19.16■□□□□ 0.66
MAP1LC3B-208ENST00000570189 ATP6V0A4Q9HBG4 840 aa19.16■□□□□ 0.66
MAP1LC3B-208ENST00000570189 CYP26B1Q9NR63 512 aa19.16■□□□□ 0.66
MAP1LC3B-208ENST00000570189 AAASQ9NRG9 546 aa19.16■□□□□ 0.66
MAP1LC3B-208ENST00000570189 LIMCH1Q9UPQ0 1083 aa19.16■□□□□ 0.66
MAP1LC3B-208ENST00000570189 A0A0U1RQF3 1178 aa19.15■□□□□ 0.66
MAP1LC3B-208ENST00000570189 FAM205CA6NFA0 338 aa19.15■□□□□ 0.66
MAP1LC3B-208ENST00000570189 DDX11L8A8MPP1 907 aa19.15■□□□□ 0.66
MAP1LC3B-208ENST00000570189 GAS2O43903 313 aaKnown RBP19.15■□□□□ 0.66
MAP1LC3B-208ENST00000570189 BAG4O95429 457 aaKnown RBP19.15■□□□□ 0.66
MAP1LC3B-208ENST00000570189 EOMESO95936 686 aa19.15■□□□□ 0.66
MAP1LC3B-208ENST00000570189 GATMP50440 423 aa19.15■□□□□ 0.66
MAP1LC3B-208ENST00000570189 DIS3L2Q8IYB7 885 aaKnown RBP19.15■□□□□ 0.66
MAP1LC3B-208ENST00000570189 KLHL23Q8NBE8 558 aa19.15■□□□□ 0.66
MAP1LC3B-208ENST00000570189 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.15■□□□□ 0.66
MAP1LC3B-208ENST00000570189 INO80BQ9C086 356 aaPredicted RBP19.15■□□□□ 0.66
MAP1LC3B-208ENST00000570189 RNF19AQ9NV58 838 aa19.15■□□□□ 0.66
MAP1LC3B-208ENST00000570189 DACT1Q9NYF0 836 aa19.15■□□□□ 0.66
MAP1LC3B-208ENST00000570189 TMEM150BA6NC51 233 aa19.14■□□□□ 0.65
MAP1LC3B-208ENST00000570189 TBKBP1A7MCY6 615 aa19.14■□□□□ 0.65
MAP1LC3B-208ENST00000570189 BTBD18B2RXH4 712 aa19.14■□□□□ 0.65
MAP1LC3B-208ENST00000570189 JAK2O60674 1132 aa19.14■□□□□ 0.65
MAP1LC3B-208ENST00000570189 LYPLA2O95372 231 aa19.14■□□□□ 0.65
MAP1LC3B-208ENST00000570189 KCNA5P22460 613 aa19.14■□□□□ 0.65
MAP1LC3B-208ENST00000570189 RFC5P40937 340 aa19.14■□□□□ 0.65
MAP1LC3B-208ENST00000570189 TRIM29Q14134 588 aa19.14■□□□□ 0.65
MAP1LC3B-208ENST00000570189 C8orf34Q49A92 452 aa19.14■□□□□ 0.65
MAP1LC3B-208ENST00000570189 PAN2Q504Q3 1202 aaKnown RBP19.14■□□□□ 0.65
MAP1LC3B-208ENST00000570189 FAM102BQ5T8I3 360 aa19.14■□□□□ 0.65
MAP1LC3B-208ENST00000570189 ZNF598Q86UK7 904 aaKnown RBP19.14■□□□□ 0.65
MAP1LC3B-208ENST00000570189 ECHDC2Q86YB7 292 aa19.14■□□□□ 0.65
MAP1LC3B-208ENST00000570189 NLRP7Q8WX94 980 aa19.14■□□□□ 0.65
MAP1LC3B-208ENST00000570189 LXNQ9BS40 222 aa19.14■□□□□ 0.65
MAP1LC3B-208ENST00000570189 CWH43Q9H720 699 aa19.14■□□□□ 0.65
MAP1LC3B-208ENST00000570189 ZSWIM4Q9H7M6 989 aa19.14■□□□□ 0.65
MAP1LC3B-208ENST00000570189 WRAP73Q9P2S5 460 aaPredicted RBP19.14■□□□□ 0.65
MAP1LC3B-208ENST00000570189 PCDHB12Q9Y5F1 795 aa19.14■□□□□ 0.65
MAP1LC3B-208ENST00000570189 GRXCR2A6NFK2 248 aa19.13■□□□□ 0.65
MAP1LC3B-208ENST00000570189 SFPQP23246 707 aaKnown RBP eCLIP19.13■□□□□ 0.65
MAP1LC3B-208ENST00000570189 LTBRP36941 435 aa19.13■□□□□ 0.65
MAP1LC3B-208ENST00000570189 HYAL1Q12794 435 aa19.13■□□□□ 0.65
MAP1LC3B-208ENST00000570189 SLC7A3Q8WY07 619 aa19.13■□□□□ 0.65
MAP1LC3B-208ENST00000570189 PPP2R3CQ969Q6 453 aa19.13■□□□□ 0.65
MAP1LC3B-208ENST00000570189 ZSCAN31Q96LW9 406 aaPredicted RBP19.13■□□□□ 0.65
MAP1LC3B-208ENST00000570189 NECAB3Q96P71 396 aaPredicted RBP19.13■□□□□ 0.65
MAP1LC3B-208ENST00000570189 CASD1Q96PB1 797 aa19.13■□□□□ 0.65
MAP1LC3B-208ENST00000570189 KIF2CQ99661 725 aa19.13■□□□□ 0.65
MAP1LC3B-208ENST00000570189 ALG13Q9NP73 1137 aaKnown RBP19.13■□□□□ 0.65
MAP1LC3B-208ENST00000570189 SUCLA2Q9P2R7 463 aaPredicted RBP19.13■□□□□ 0.65
MAP1LC3B-208ENST00000570189 LZTS1Q9Y250 596 aa19.13■□□□□ 0.65
MAP1LC3B-208ENST00000570189 DTNBO60941 627 aa19.12■□□□□ 0.65
MAP1LC3B-208ENST00000570189 LAG3P18627 525 aa19.12■□□□□ 0.65
MAP1LC3B-208ENST00000570189 DNAJB1P25685 340 aa19.12■□□□□ 0.65
MAP1LC3B-208ENST00000570189 YWHABP31946 246 aaKnown RBP19.12■□□□□ 0.65
MAP1LC3B-208ENST00000570189 ORC2Q13416 577 aaPredicted RBP19.12■□□□□ 0.65
MAP1LC3B-208ENST00000570189 PLA2G4FQ68DD2 849 aa19.12■□□□□ 0.65
MAP1LC3B-208ENST00000570189 PDE12Q6L8Q7 609 aaKnown RBP19.12■□□□□ 0.65
MAP1LC3B-208ENST00000570189 OTUD6AQ7L8S5 288 aa19.12■□□□□ 0.65
MAP1LC3B-208ENST00000570189 FAM178BQ8IXR5 827 aa19.12■□□□□ 0.65
MAP1LC3B-208ENST00000570189 SCLT1Q96NL6 688 aa19.12■□□□□ 0.65
MAP1LC3B-208ENST00000570189 MTMR9Q96QG7 549 aa19.12■□□□□ 0.65
MAP1LC3B-208ENST00000570189 HSD17B14Q9BPX1 270 aa19.12■□□□□ 0.65
MAP1LC3B-208ENST00000570189 IFT122Q9HBG6 1241 aa19.12■□□□□ 0.65
MAP1LC3B-208ENST00000570189 SH2B1Q9NRF2 756 aaPredicted RBP19.12■□□□□ 0.65
MAP1LC3B-208ENST00000570189 TYW1Q9NV66 732 aaKnown RBP19.12■□□□□ 0.65
MAP1LC3B-208ENST00000570189 PCDHA12Q9UN75 941 aa19.12■□□□□ 0.65
MAP1LC3B-208ENST00000570189 A0A087WZ62 844 aa19.11■□□□□ 0.65
MAP1LC3B-208ENST00000570189 FSD2A1L4K1 749 aa19.11■□□□□ 0.65
MAP1LC3B-208ENST00000570189 MARCH6O60337 910 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms