RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 PLEKHD1A6NEE1 506 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 PRAMEF25A6NGN4 478 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 NUDT19A8MXV4 375 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 FOXP2O15409 715 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 MYL1P05976 194 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 CLEC2LP0C7M8 214 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 PFKLP17858 780 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 LPOP22079 712 aaPredicted RBP4.77□□□□□ -1.65
UBR1-211ENST00000569971 CYP2C19P33261 490 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 GJA4P35212 333 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 SLC6A11P48066 632 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 GALK1P51570 392 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 KRT85P78386 507 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 BIRC2Q13490 618 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 PWP2Q15269 919 aaKnown RBP4.77□□□□□ -1.65
UBR1-211ENST00000569971 EPHA7Q15375 998 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 CHRNA2Q15822 529 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 MINDY4Q4G0A6 757 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 CYP4F22Q6NT55 531 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 PPP4R4Q6NUP7 873 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 ZC3H14Q6PJT7 736 aaKnown RBP4.77□□□□□ -1.65
UBR1-211ENST00000569971 PAQR3Q6TCH7 311 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 TTLL7Q6ZT98 887 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 EPM2AIP1Q7L775 607 aaPredicted RBP4.77□□□□□ -1.65
UBR1-211ENST00000569971 MILR1Q7Z6M3 343 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 PHOSPHO1Q8TCT1 267 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 SEC14L1Q92503 715 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 ERCC4Q92889 916 aaPredicted RBP4.77□□□□□ -1.65
UBR1-211ENST00000569971 TIFAQ96CG3 184 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 CLIP3Q96DZ5 547 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 TEKT5Q96M29 485 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 SLC2A13Q96QE2 648 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 ORAI2Q96SN7 254 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 CHST12Q9NRB3 414 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 DNAJC28Q9NX36 388 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 KCNG1Q9UIX4 513 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 INVSQ9Y283 1065 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 PCDHB4Q9Y5E5 795 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 TCRBV5S2A0A599 114 aa4.76□□□□□ -1.65
UBR1-211ENST00000569971 PLIN1O60240 522 aa4.76□□□□□ -1.65
UBR1-211ENST00000569971 ZRANB2O95218 330 aaKnown RBP eCLIP4.76□□□□□ -1.65
UBR1-211ENST00000569971 CYBBP04839 570 aa4.76□□□□□ -1.65
UBR1-211ENST00000569971 MMEP08473 750 aa4.76□□□□□ -1.65
UBR1-211ENST00000569971 U2AF1L5P0DN76 240 aaPredicted RBP4.76□□□□□ -1.65
UBR1-211ENST00000569971 SDHAP31040 664 aa4.76□□□□□ -1.65
UBR1-211ENST00000569971 CDR1P51861 262 aa4.76□□□□□ -1.65
UBR1-211ENST00000569971 U2AF1Q01081 240 aaKnown RBP eCLIP4.76□□□□□ -1.65
UBR1-211ENST00000569971 SRSF2Q01130 221 aaKnown RBP4.76□□□□□ -1.65
UBR1-211ENST00000569971 ADCY1Q08828 1119 aa4.76□□□□□ -1.65
UBR1-211ENST00000569971 MOGSQ13724 837 aa4.76□□□□□ -1.65
UBR1-211ENST00000569971 GTF2H3Q13889 308 aa4.76□□□□□ -1.65
UBR1-211ENST00000569971 FSCN1Q16658 493 aaKnown RBP4.76□□□□□ -1.65
UBR1-211ENST00000569971 TOR2AQ5JU69 321 aa4.76□□□□□ -1.65
UBR1-211ENST00000569971 SYCP2LQ5T4T6 812 aa4.76□□□□□ -1.65
UBR1-211ENST00000569971 CXorf67Q86X51 503 aaPredicted RBP4.76□□□□□ -1.65
UBR1-211ENST00000569971 DCP2Q8IU60 420 aaKnown RBP4.76□□□□□ -1.65
UBR1-211ENST00000569971 TRIM48Q8IWZ4 208 aa4.76□□□□□ -1.65
UBR1-211ENST00000569971 TMEFF1Q8IYR6 380 aa4.76□□□□□ -1.65
UBR1-211ENST00000569971 ARRDC4Q8NCT1 418 aa4.76□□□□□ -1.65
UBR1-211ENST00000569971 EAF2Q96CJ1 260 aaPredicted RBP4.76□□□□□ -1.65
UBR1-211ENST00000569971 ACAP3Q96P50 834 aa4.76□□□□□ -1.65
UBR1-211ENST00000569971 GBP4Q96PP9 640 aa4.76□□□□□ -1.65
UBR1-211ENST00000569971 RPS6KC1Q96S38 1066 aa4.76□□□□□ -1.65
UBR1-211ENST00000569971 EDARQ9UNE0 448 aa4.76□□□□□ -1.65
UBR1-211ENST00000569971 CUX2O14529 1486 aa4.75□□□□□ -1.65
UBR1-211ENST00000569971 PRSS38A1L453 326 aa4.75□□□□□ -1.65
UBR1-211ENST00000569971 ELL2O00472 640 aaPredicted RBP4.75□□□□□ -1.65
UBR1-211ENST00000569971 AP1G1O43747 822 aa4.75□□□□□ -1.65
UBR1-211ENST00000569971 ENPP1P22413 925 aa4.75□□□□□ -1.65
UBR1-211ENST00000569971 MAPKAPK2P49137 400 aa4.75□□□□□ -1.65
UBR1-211ENST00000569971 FNTBP49356 437 aa4.75□□□□□ -1.65
UBR1-211ENST00000569971 MANFP55145 182 aaKnown RBP4.75□□□□□ -1.65
UBR1-211ENST00000569971 GRM3Q14832 879 aa4.75□□□□□ -1.65
UBR1-211ENST00000569971 UGT8Q16880 541 aa4.75□□□□□ -1.65
UBR1-211ENST00000569971 PAN2Q504Q3 1202 aaKnown RBP4.75□□□□□ -1.65
UBR1-211ENST00000569971 ARHGAP29Q52LW3 1261 aa4.75□□□□□ -1.65
UBR1-211ENST00000569971 ZFYVE27Q5T4F4 411 aa4.75□□□□□ -1.65
UBR1-211ENST00000569971 CCDC62Q6P9F0 684 aa4.75□□□□□ -1.65
UBR1-211ENST00000569971 TMC6Q7Z403 805 aa4.75□□□□□ -1.65
UBR1-211ENST00000569971 LDHDQ86WU2 507 aa4.75□□□□□ -1.65
UBR1-211ENST00000569971 NME9Q86XW9 330 aa4.75□□□□□ -1.65
UBR1-211ENST00000569971 IGDCC3Q8IVU1 814 aa4.75□□□□□ -1.65
UBR1-211ENST00000569971 NETO2Q8NC67 525 aa4.75□□□□□ -1.65
UBR1-211ENST00000569971 ASB15Q8WXK1 588 aa4.75□□□□□ -1.65
UBR1-211ENST00000569971 FOXRED1Q96CU9 486 aaPredicted RBP4.75□□□□□ -1.65
UBR1-211ENST00000569971 SLC39A13Q96H72 371 aa4.75□□□□□ -1.65
UBR1-211ENST00000569971 NUP88Q99567 741 aaPredicted RBP4.75□□□□□ -1.65
UBR1-211ENST00000569971 PDGFDQ9GZP0 370 aaPredicted RBP4.75□□□□□ -1.65
UBR1-211ENST00000569971 AP5M1Q9H0R1 490 aa4.75□□□□□ -1.65
UBR1-211ENST00000569971 QRSL1Q9H0R6 528 aaKnown RBP4.75□□□□□ -1.65
UBR1-211ENST00000569971 POFUT1Q9H488 388 aa4.75□□□□□ -1.65
UBR1-211ENST00000569971 MYH16Q9H6N6 1097 aa4.75□□□□□ -1.65
UBR1-211ENST00000569971 TNFRSF12AQ9NP84 129 aa4.75□□□□□ -1.65
UBR1-211ENST00000569971 KLHL14Q9P2G3 628 aa4.75□□□□□ -1.65
UBR1-211ENST00000569971 DDX20Q9UHI6 824 aaKnown RBP4.75□□□□□ -1.65
UBR1-211ENST00000569971 RCAN3Q9UKA8 241 aa4.75□□□□□ -1.65
UBR1-211ENST00000569971 PCDHA5Q9Y5H7 936 aa4.75□□□□□ -1.65
UBR1-211ENST00000569971 FGD5Q6ZNL6 1462 aa4.75□□□□□ -1.65
UBR1-211ENST00000569971 FANCD2Q9BXW9 1451 aa4.75□□□□□ -1.65
UBR1-211ENST00000569971 IRS2Q9Y4H2 1338 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms