RNA–Protein interactions for RNA: ENST00000569298.1

KARS-211, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-211ENST00000569298 RPS6KC1Q96S38 1066 aa6.99□□□□□ -1.29
KARS-211ENST00000569298 HAUS8Q9BT25 410 aa6.99□□□□□ -1.29
KARS-211ENST00000569298 SPZ1Q9BXG8 430 aa6.99□□□□□ -1.29
KARS-211ENST00000569298 NUF2Q9BZD4 464 aa6.99□□□□□ -1.29
KARS-211ENST00000569298 KRT23Q9C075 422 aa6.99□□□□□ -1.29
KARS-211ENST00000569298 XPO4Q9C0E2 1151 aaKnown RBP6.99□□□□□ -1.29
KARS-211ENST00000569298 PDGFDQ9GZP0 370 aaPredicted RBP6.99□□□□□ -1.29
KARS-211ENST00000569298 RAB17Q9H0T7 212 aa6.99□□□□□ -1.29
KARS-211ENST00000569298 CNOT10Q9H9A5 744 aaKnown RBP6.99□□□□□ -1.29
KARS-211ENST00000569298 RNPEPL1Q9HAU8 725 aa6.99□□□□□ -1.29
KARS-211ENST00000569298 TRPC7Q9HCX4 862 aa6.99□□□□□ -1.29
KARS-211ENST00000569298 DDX43Q9NXZ2 648 aaKnown RBP6.99□□□□□ -1.29
KARS-211ENST00000569298 AGAP1Q9UPQ3 857 aa6.99□□□□□ -1.29
KARS-211ENST00000569298 TSC22D4Q9Y3Q8 395 aa6.99□□□□□ -1.29
KARS-211ENST00000569298 HBS1LQ9Y450 684 aaKnown RBP6.99□□□□□ -1.29
KARS-211ENST00000569298 ITSN2Q9NZM3 1697 aa6.99□□□□□ -1.29
KARS-211ENST00000569298 KDM6BO15054 1643 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 KIAA0556O60303 1618 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 FADS2P1A8MWK0 482 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 TMEM114B3SHH9 223 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 GOLGA8MH3BSY2 632 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 OPLAHO14841 1288 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 HGSO14964 777 aaPredicted RBP6.98□□□□□ -1.29
KARS-211ENST00000569298 SLC22A1O15245 554 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 HNRNPRO43390 633 aaKnown RBP6.98□□□□□ -1.29
KARS-211ENST00000569298 FARP2O94887 1054 aaPredicted RBP6.98□□□□□ -1.29
KARS-211ENST00000569298 TJP3O95049 919 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 ZBED1O96006 694 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 RHOXF2BP0C7M4 288 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 CTRB1P17538 263 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 LMNB1P20700 586 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 IBSPP21815 317 aaPredicted RBP6.98□□□□□ -1.29
KARS-211ENST00000569298 PRKACBP22694 351 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 CETN2P41208 172 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 KRT6CP48668 564 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 KPNA1P52294 538 aaPredicted RBP6.98□□□□□ -1.29
KARS-211ENST00000569298 TBL3Q12788 808 aaKnown RBP6.98□□□□□ -1.29
KARS-211ENST00000569298 PAK2Q13177 524 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 R3HDM1Q15032 1099 aaKnown RBP6.98□□□□□ -1.29
KARS-211ENST00000569298 EPHA7Q15375 998 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 SF3B3Q15393 1217 aaKnown RBP6.98□□□□□ -1.29
KARS-211ENST00000569298 GALNTL6Q49A17 601 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 LIN52Q52LA3 116 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 HSP90AA5PQ58FG0 334 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 FAM209AQ5JX71 171 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 RNF220Q5VTB9 566 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 CTRB2Q6GPI1 263 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 C8orf74Q6P047 294 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 DUS1LQ6P1R4 473 aaKnown RBP6.98□□□□□ -1.29
KARS-211ENST00000569298 AGMOQ6ZNB7 445 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 SND1Q7KZF4 910 aaKnown RBP eCLIP6.98□□□□□ -1.29
KARS-211ENST00000569298 TAOK1Q7L7X3 1001 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 CKAP2LQ8IYA6 745 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 SPICE1Q8N0Z3 855 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 ZNF713Q8N859 430 aaPredicted RBP6.98□□□□□ -1.29
KARS-211ENST00000569298 CAGE1Q8TC20 777 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 FBXO41Q8TF61 875 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 ATRIPQ8WXE1 791 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 CLP1Q92989 425 aaKnown RBP6.98□□□□□ -1.29
KARS-211ENST00000569298 RUNDC1Q96C34 613 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 DGCR14Q96DF8 476 aaKnown RBP6.98□□□□□ -1.29
KARS-211ENST00000569298 ATP6V1G3Q96LB4 118 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 CEP19Q96LK0 163 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 TMEM237Q96Q45 408 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 RHOXF2Q9BQY4 288 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 RIOK1Q9BRS2 568 aaKnown RBP6.98□□□□□ -1.29
KARS-211ENST00000569298 HERC2P3Q9BVR0 1158 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 FAM129AQ9BZQ8 928 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 EHD4Q9H223 541 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 ESF1Q9H501 851 aaKnown RBP6.98□□□□□ -1.29
KARS-211ENST00000569298 TAF1DQ9H5J8 278 aaPredicted RBP6.98□□□□□ -1.29
KARS-211ENST00000569298 SLC38A10Q9HBR0 1119 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 EPB41L4AQ9HCS5 686 aaPredicted RBP6.98□□□□□ -1.29
KARS-211ENST00000569298 FAM114A2Q9NRY5 505 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 ARMC1Q9NVT9 282 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.98□□□□□ -1.291e-8■■■□□ 19.1
KARS-211ENST00000569298 PPP1R1BQ9UD71 204 aaPredicted RBP6.98□□□□□ -1.29
KARS-211ENST00000569298 GNEQ9Y223 722 aaKnown RBP6.98□□□□□ -1.29
KARS-211ENST00000569298 OVOS2A0A0G2JMS6 1433 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 OVOS2A0A0J9YW53 1432 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 OVOS2Q6IE36 1432 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 TSPOAP1O95153 1857 aa6.98□□□□□ -1.29
KARS-211ENST00000569298 ARPC4-TTLL3A0A0A6YYG9 625 aa6.97□□□□□ -1.29
KARS-211ENST00000569298 A0A0B4J203 849 aa6.97□□□□□ -1.29
KARS-211ENST00000569298 SH3PXD2BA1X283 911 aa6.97□□□□□ -1.29
KARS-211ENST00000569298 HIP1O00291 1037 aa6.97□□□□□ -1.29
KARS-211ENST00000569298 PSMD14O00487 310 aa6.97□□□□□ -1.29
KARS-211ENST00000569298 RNMTO43148 476 aaKnown RBP6.97□□□□□ -1.29
KARS-211ENST00000569298 ORC4O43929 436 aa6.97□□□□□ -1.29
KARS-211ENST00000569298 ECE2O60344 883 aa6.97□□□□□ -1.29
KARS-211ENST00000569298 KCNJ13O60928 360 aa6.97□□□□□ -1.29
KARS-211ENST00000569298 YEATS4O95619 227 aa6.97□□□□□ -1.29
KARS-211ENST00000569298 OXSR1O95747 527 aaPredicted RBP6.97□□□□□ -1.29
KARS-211ENST00000569298 GNA14O95837 355 aa6.97□□□□□ -1.29
KARS-211ENST00000569298 MYCP01106 439 aaPredicted RBP6.97□□□□□ -1.29
KARS-211ENST00000569298 GNAI2P04899 355 aa6.97□□□□□ -1.29
KARS-211ENST00000569298 ADH1AP07327 375 aa6.97□□□□□ -1.29
KARS-211ENST00000569298 GLI1P08151 1106 aa6.97□□□□□ -1.29
KARS-211ENST00000569298 GLI2P10070 1586 aa6.97□□□□□ -1.29
KARS-211ENST00000569298 ZNF12P17014 697 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms