RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 S1PR5Q9H228 398 aa12.69□□□□□ -0.38
CHRFAM7A-206ENST00000569278 AZI2Q9H6S1 392 aa12.69□□□□□ -0.38
CHRFAM7A-206ENST00000569278 RGS18Q9NS28 235 aa12.69□□□□□ -0.38
CHRFAM7A-206ENST00000569278 DENND4AQ7Z401 1863 aa12.69□□□□□ -0.38
CHRFAM7A-206ENST00000569278 TBKBP1A7MCY6 615 aa12.68□□□□□ -0.38
CHRFAM7A-206ENST00000569278 HIDE1A8MVS5 230 aa12.68□□□□□ -0.38
CHRFAM7A-206ENST00000569278 DDX39AO00148 427 aaKnown RBP12.68□□□□□ -0.38
CHRFAM7A-206ENST00000569278 PPFIA3O75145 1194 aa12.68□□□□□ -0.38
CHRFAM7A-206ENST00000569278 FGF18O76093 207 aa12.68□□□□□ -0.38
CHRFAM7A-206ENST00000569278 PDGFBP01127 241 aaPredicted RBP12.68□□□□□ -0.38
CHRFAM7A-206ENST00000569278 STAG3L1P0CL83 205 aa12.68□□□□□ -0.38
CHRFAM7A-206ENST00000569278 CALM1P0DP23 149 aa12.68□□□□□ -0.38
CHRFAM7A-206ENST00000569278 CALM2P0DP24 149 aa12.68□□□□□ -0.38
CHRFAM7A-206ENST00000569278 CALM3P0DP25 149 aa12.68□□□□□ -0.38
CHRFAM7A-206ENST00000569278 IBSPP21815 317 aaPredicted RBP12.68□□□□□ -0.38
CHRFAM7A-206ENST00000569278 PBX3P40426 434 aa12.68□□□□□ -0.38
CHRFAM7A-206ENST00000569278 FAM189BP81408 668 aa12.68□□□□□ -0.38
CHRFAM7A-206ENST00000569278 NFX1Q12986 1120 aaKnown RBP12.68□□□□□ -0.38
CHRFAM7A-206ENST00000569278 NFKBIBQ15653 356 aa12.68□□□□□ -0.38
CHRFAM7A-206ENST00000569278 PPP1R18Q6NYC8 613 aa12.68□□□□□ -0.38
CHRFAM7A-206ENST00000569278 MFSD14AQ96MC6 490 aa12.68□□□□□ -0.38
CHRFAM7A-206ENST00000569278 OSMRQ99650 979 aa12.68□□□□□ -0.38
CHRFAM7A-206ENST00000569278 PHF7Q9BWX1 381 aaPredicted RBP12.68□□□□□ -0.38
CHRFAM7A-206ENST00000569278 TLR9Q9NR96 1032 aa12.68□□□□□ -0.38
CHRFAM7A-206ENST00000569278 TYW1Q9NV66 732 aaKnown RBP12.68□□□□□ -0.38
CHRFAM7A-206ENST00000569278 ST3GAL5Q9UNP4 418 aa12.68□□□□□ -0.38
CHRFAM7A-206ENST00000569278 SLC12A7Q9Y666 1083 aa12.68□□□□□ -0.38
CHRFAM7A-206ENST00000569278 MYH9P35579 1960 aaKnown RBP12.68□□□□□ -0.38
CHRFAM7A-206ENST00000569278 COL1A2P08123 1366 aa12.68□□□□□ -0.38
CHRFAM7A-206ENST00000569278 M0QZ92 97 aa12.67□□□□□ -0.38
CHRFAM7A-206ENST00000569278 VTNP04004 478 aa12.67□□□□□ -0.38
CHRFAM7A-206ENST00000569278 ATF7P17544 494 aaPredicted RBP12.67□□□□□ -0.38
CHRFAM7A-206ENST00000569278 CDC27P30260 824 aa12.67□□□□□ -0.38
CHRFAM7A-206ENST00000569278 DDIT3P35638 169 aa12.67□□□□□ -0.38
CHRFAM7A-206ENST00000569278 NEK4P51957 841 aa12.67□□□□□ -0.38
CHRFAM7A-206ENST00000569278 NAPAP54920 295 aa12.67□□□□□ -0.38
CHRFAM7A-206ENST00000569278 EXOSC10Q01780 885 aaKnown RBP12.67□□□□□ -0.38
CHRFAM7A-206ENST00000569278 UBE3AQ05086 875 aa12.67□□□□□ -0.38
CHRFAM7A-206ENST00000569278 KIZQ2M2Z5 673 aa12.67□□□□□ -0.38
CHRFAM7A-206ENST00000569278 ADCK5Q3MIX3 580 aa12.67□□□□□ -0.38
CHRFAM7A-206ENST00000569278 TMEM184AQ6ZMB5 413 aa12.67□□□□□ -0.38
CHRFAM7A-206ENST00000569278 CLEC17AQ6ZS10 378 aa12.67□□□□□ -0.38
CHRFAM7A-206ENST00000569278 NME8Q8N427 588 aa12.67□□□□□ -0.38
CHRFAM7A-206ENST00000569278 LENG9Q96B70 501 aa12.67□□□□□ -0.38
CHRFAM7A-206ENST00000569278 ZSCAN31Q96LW9 406 aaPredicted RBP12.67□□□□□ -0.38
CHRFAM7A-206ENST00000569278 CASD1Q96PB1 797 aa12.67□□□□□ -0.38
CHRFAM7A-206ENST00000569278 SDF4Q9BRK5 362 aa12.67□□□□□ -0.38
CHRFAM7A-206ENST00000569278 TLE6Q9H808 572 aa12.67□□□□□ -0.38
CHRFAM7A-206ENST00000569278 GINS2Q9Y248 185 aa12.67□□□□□ -0.38
CHRFAM7A-206ENST00000569278 DMXL1Q9Y485 3027 aa12.67□□□□□ -0.38
CHRFAM7A-206ENST00000569278 HBP1O60381 514 aa12.66□□□□□ -0.38
CHRFAM7A-206ENST00000569278 RPS6KA5O75582 802 aa12.66□□□□□ -0.38
CHRFAM7A-206ENST00000569278 SLC26A2P50443 739 aa12.66□□□□□ -0.38
CHRFAM7A-206ENST00000569278 CLCN3P51790 818 aa12.66□□□□□ -0.38
CHRFAM7A-206ENST00000569278 ADCY7P51828 1080 aa12.66□□□□□ -0.38
CHRFAM7A-206ENST00000569278 ANKRD1Q15327 319 aa12.66□□□□□ -0.38
CHRFAM7A-206ENST00000569278 CLLU1OSQ5K130 101 aa12.66□□□□□ -0.38
CHRFAM7A-206ENST00000569278 PLPP4Q5VZY2 271 aa12.66□□□□□ -0.38
CHRFAM7A-206ENST00000569278 ANKRD54Q6NXT1 300 aa12.66□□□□□ -0.38
CHRFAM7A-206ENST00000569278 SLC24A5Q71RS6 500 aa12.66□□□□□ -0.38
CHRFAM7A-206ENST00000569278 NIPA1Q7RTP0 329 aa12.66□□□□□ -0.38
CHRFAM7A-206ENST00000569278 TMTC2Q8N394 836 aa12.66□□□□□ -0.38
CHRFAM7A-206ENST00000569278 FBXL6Q8N531 539 aa12.66□□□□□ -0.38
CHRFAM7A-206ENST00000569278 RASGRP4Q8TDF6 673 aa12.66□□□□□ -0.38
CHRFAM7A-206ENST00000569278 PBXIP1Q96AQ6 731 aa12.66□□□□□ -0.38
CHRFAM7A-206ENST00000569278 RPGRIP1Q96KN7 1286 aa12.66□□□□□ -0.38
CHRFAM7A-206ENST00000569278 GBP4Q96PP9 640 aa12.66□□□□□ -0.38
CHRFAM7A-206ENST00000569278 ADAMTS10Q9H324 1103 aa12.66□□□□□ -0.38
CHRFAM7A-206ENST00000569278 SMOC2Q9H3U7 446 aa12.66□□□□□ -0.38
CHRFAM7A-206ENST00000569278 C1orf112Q9NSG2 853 aa12.66□□□□□ -0.38
CHRFAM7A-206ENST00000569278 FAM86C1Q9NVL1 165 aa12.66□□□□□ -0.38
CHRFAM7A-206ENST00000569278 BARHL2Q9NY43 387 aa12.66□□□□□ -0.38
CHRFAM7A-206ENST00000569278 MAFBQ9Y5Q3 323 aaPredicted RBP12.66□□□□□ -0.38
CHRFAM7A-206ENST00000569278 FRYLO94915 3013 aa12.65□□□□□ -0.38
CHRFAM7A-206ENST00000569278 ZFHX2Q9C0A1 2572 aaPredicted RBP12.65□□□□□ -0.38
CHRFAM7A-206ENST00000569278 ZNF862O60290 1169 aa12.65□□□□□ -0.38
CHRFAM7A-206ENST00000569278 HMGB1P09429 215 aaKnown RBP12.65□□□□□ -0.38
CHRFAM7A-206ENST00000569278 EMP3P54852 163 aa12.65□□□□□ -0.38
CHRFAM7A-206ENST00000569278 PLCB3Q01970 1234 aa12.65□□□□□ -0.38
CHRFAM7A-206ENST00000569278 SIGLEC14Q08ET2 396 aa12.65□□□□□ -0.38
CHRFAM7A-206ENST00000569278 AP3B2Q13367 1082 aa12.65□□□□□ -0.38
CHRFAM7A-206ENST00000569278 PTPN21Q16825 1174 aa12.65□□□□□ -0.38
CHRFAM7A-206ENST00000569278 PPP2R3CQ969Q6 453 aa12.65□□□□□ -0.38
CHRFAM7A-206ENST00000569278 APOL5Q9BWW9 433 aa12.65□□□□□ -0.38
CHRFAM7A-206ENST00000569278 ZNF302Q9NR11 478 aa12.65□□□□□ -0.38
CHRFAM7A-206ENST00000569278 TMEM161AQ9NX61 479 aa12.65□□□□□ -0.38
CHRFAM7A-206ENST00000569278 LRFN2Q9ULH4 789 aa12.65□□□□□ -0.38
CHRFAM7A-206ENST00000569278 PCDHB7Q9Y5E2 793 aa12.65□□□□□ -0.38
CHRFAM7A-206ENST00000569278 V9GY48 417 aaPredicted RBP12.65□□□□□ -0.38
CHRFAM7A-206ENST00000569278 NID2Q14112 1375 aa12.65□□□□□ -0.38
CHRFAM7A-206ENST00000569278 DENND3A2RUS2 1198 aa12.64□□□□□ -0.39
CHRFAM7A-206ENST00000569278 SMCO2A6NFE2 343 aa12.64□□□□□ -0.39
CHRFAM7A-206ENST00000569278 IPO5O00410 1097 aaKnown RBP12.64□□□□□ -0.39
CHRFAM7A-206ENST00000569278 BACH1O14867 736 aa12.64□□□□□ -0.39
CHRFAM7A-206ENST00000569278 FOSP01100 380 aaPredicted RBP12.64□□□□□ -0.39
CHRFAM7A-206ENST00000569278 CYP3A4P08684 503 aa12.64□□□□□ -0.39
CHRFAM7A-206ENST00000569278 SP100P23497 879 aaPredicted RBP12.64□□□□□ -0.39
CHRFAM7A-206ENST00000569278 CRYBB1P53674 252 aaPredicted RBP12.64□□□□□ -0.39
CHRFAM7A-206ENST00000569278 PTPN5P54829 565 aa12.64□□□□□ -0.39
CHRFAM7A-206ENST00000569278 CUL4AQ13619 759 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms