RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 POLR3FQ9H1D9 316 aaPredicted RBP10.12□□□□□ -0.79
CHD9-219ENST00000569225 WNT8AQ9H1J5 351 aa10.12□□□□□ -0.79
CHD9-219ENST00000569225 BLOC1S4Q9NUP1 217 aa10.12□□□□□ -0.79
CHD9-219ENST00000569225 KCNG1Q9UIX4 513 aa10.12□□□□□ -0.79
CHD9-219ENST00000569225 COL4A3BPQ9Y5P4 624 aa10.12□□□□□ -0.79
CHD9-219ENST00000569225 CDY2AQ9Y6F7 541 aa10.12□□□□□ -0.79
CHD9-219ENST00000569225 UMODL1Q5DID0 1318 aa10.12□□□□□ -0.79
CHD9-219ENST00000569225 POLR2DO15514 142 aaKnown RBP10.11□□□□□ -0.79
CHD9-219ENST00000569225 VTNP04004 478 aa10.11□□□□□ -0.79
CHD9-219ENST00000569225 PFKFB1P16118 471 aa10.11□□□□□ -0.79
CHD9-219ENST00000569225 CRYBB1P53674 252 aaPredicted RBP10.11□□□□□ -0.79
CHD9-219ENST00000569225 NLRP11P59045 1033 aaKnown RBP10.11□□□□□ -0.79
CHD9-219ENST00000569225 AMPD3Q01432 767 aa10.11□□□□□ -0.79
CHD9-219ENST00000569225 TMEM62Q0P6H9 643 aa10.11□□□□□ -0.79
CHD9-219ENST00000569225 LAMTOR4Q0VGL1 99 aa10.11□□□□□ -0.79
CHD9-219ENST00000569225 MKRN4PQ13434 485 aaPredicted RBP10.11□□□□□ -0.79
CHD9-219ENST00000569225 DHX8Q14562 1220 aaKnown RBP10.11□□□□□ -0.79
CHD9-219ENST00000569225 MCM6Q14566 821 aa10.11□□□□□ -0.79
CHD9-219ENST00000569225 PPP2R5AQ15172 486 aa10.11□□□□□ -0.79
CHD9-219ENST00000569225 KIZQ2M2Z5 673 aa10.11□□□□□ -0.79
CHD9-219ENST00000569225 ODR4Q5SWX8 454 aa10.11□□□□□ -0.79
CHD9-219ENST00000569225 RINT1Q6NUQ1 792 aa10.11□□□□□ -0.79
CHD9-219ENST00000569225 CLEC17AQ6ZS10 378 aa10.11□□□□□ -0.79
CHD9-219ENST00000569225 CEP57L1Q8IYX8 460 aa10.11□□□□□ -0.79
CHD9-219ENST00000569225 TMEM87AQ8NBN3 555 aa10.11□□□□□ -0.79
CHD9-219ENST00000569225 IFT74Q96LB3 600 aa10.11□□□□□ -0.79
CHD9-219ENST00000569225 RUSC1Q9BVN2 902 aa10.11□□□□□ -0.79
CHD9-219ENST00000569225 GCOM2Q9BZD3 368 aaPredicted RBP10.11□□□□□ -0.79
CHD9-219ENST00000569225 RTN4Q9NQC3 1192 aaKnown RBP10.11□□□□□ -0.79
CHD9-219ENST00000569225 XPNPEP1Q9NQW7 623 aa10.11□□□□□ -0.79
CHD9-219ENST00000569225 GINS2Q9Y248 185 aa10.11□□□□□ -0.79
CHD9-219ENST00000569225 SQORQ9Y6N5 450 aa10.11□□□□□ -0.79
CHD9-219ENST00000569225 FAM237AA0A1B0GTK4 181 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 A0A1B0GVL5 298 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 GOLGA6L22H0YM25 854 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 TBCAO75347 108 aaKnown RBP10.1□□□□□ -0.79
CHD9-219ENST00000569225 CHRNA1P02708 482 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 CSF2RAP15509 400 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 ITGB8P26012 769 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 ARL2P36404 184 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 SYKP43405 635 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 PHKA2P46019 1235 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 GPC3P51654 580 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 MDM2Q00987 491 aaPredicted RBP10.1□□□□□ -0.79
CHD9-219ENST00000569225 MGAT3Q09327 533 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 DRP2Q13474 957 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 TPRNQ4KMQ1 711 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 PSRC1Q6PGN9 363 aaPredicted RBP10.1□□□□□ -0.79
CHD9-219ENST00000569225 TRAF7Q6Q0C0 670 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 C1orf186Q6ZWK4 172 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 MAEAQ7L5Y9 396 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 SCLYQ96I15 445 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 NLRP4Q96MN2 994 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 INO80BQ9C086 356 aaPredicted RBP10.1□□□□□ -0.79
CHD9-219ENST00000569225 TNMDQ9H2S6 317 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 C17orf75Q9HAS0 396 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 IL23AQ9NPF7 189 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 A0A087X0B3 334 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 GPR32O75388 356 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 SLFN14P0C7P3 912 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 ACTN1P12814 892 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 MAGEA10P43363 369 aaPredicted RBP10.1□□□□□ -0.79
CHD9-219ENST00000569225 E2F4Q16254 413 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 NAALADL2Q58DX5 795 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 TSHZ1Q6ZSZ6 1077 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 SEPT8Q92599 483 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 ADAMTS10Q9H324 1103 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 GPRC5CQ9NQ84 441 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 ODF2LQ9ULJ1 636 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 HPSEQ9Y251 543 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 MYH15Q9Y2K3 1946 aa10.1□□□□□ -0.79
CHD9-219ENST00000569225 HIP1RO75146 1068 aa10.09□□□□□ -0.79
CHD9-219ENST00000569225 RPS6KA5O75582 802 aa10.09□□□□□ -0.79
CHD9-219ENST00000569225 CXCL10P02778 98 aa10.09□□□□□ -0.79
CHD9-219ENST00000569225 SRGAP2CP0DJJ0 459 aa10.09□□□□□ -0.79
CHD9-219ENST00000569225 GHRP10912 638 aa10.09□□□□□ -0.79
CHD9-219ENST00000569225 DARSP14868 501 aaKnown RBP10.09□□□□□ -0.79
CHD9-219ENST00000569225 SFPQP23246 707 aaKnown RBP eCLIP10.09□□□□□ -0.79
CHD9-219ENST00000569225 GLRA2P23416 452 aa10.09□□□□□ -0.79
CHD9-219ENST00000569225 EIF4BP23588 611 aaKnown RBP10.09□□□□□ -0.79
CHD9-219ENST00000569225 NDUFA8P51970 172 aa10.09□□□□□ -0.79
CHD9-219ENST00000569225 POU5F1BQ06416 359 aa10.09□□□□□ -0.79
CHD9-219ENST00000569225 PAK2Q13177 524 aa10.09□□□□□ -0.79
CHD9-219ENST00000569225 DMP1Q13316 513 aaPredicted RBP10.09□□□□□ -0.79
CHD9-219ENST00000569225 LPIN1Q14693 890 aa10.09□□□□□ -0.79
CHD9-219ENST00000569225 PCBP1Q15365 356 aaKnown RBP eCLIP10.09□□□□□ -0.79
CHD9-219ENST00000569225 FBXO47Q5MNV8 452 aa10.09□□□□□ -0.79
CHD9-219ENST00000569225 DEFB128Q7Z7B8 93 aa10.09□□□□□ -0.79
CHD9-219ENST00000569225 ZBTB8OSQ8IWT0 167 aa10.09□□□□□ -0.79
CHD9-219ENST00000569225 RNF149Q8NC42 400 aa10.09□□□□□ -0.79
CHD9-219ENST00000569225 ASAP3Q8TDY4 903 aa10.09□□□□□ -0.79
CHD9-219ENST00000569225 LRRC15Q8TF66 581 aa10.09□□□□□ -0.79
CHD9-219ENST00000569225 APBB2Q92870 758 aa10.09□□□□□ -0.79
CHD9-219ENST00000569225 PPP1R16BQ96T49 567 aa10.09□□□□□ -0.79
CHD9-219ENST00000569225 OSMRQ99650 979 aa10.09□□□□□ -0.79
CHD9-219ENST00000569225 C2orf40Q9H1Z8 148 aa10.09□□□□□ -0.79
CHD9-219ENST00000569225 MTIF3Q9H2K0 278 aaKnown RBP10.09□□□□□ -0.79
CHD9-219ENST00000569225 LARSQ9P2J5 1176 aaKnown RBP10.09□□□□□ -0.79
CHD9-219ENST00000569225 PHLPP2Q6ZVD8 1323 aa10.09□□□□□ -0.79
CHD9-219ENST00000569225 MYH9P35579 1960 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms