RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 IPO5O00410 1097 aaKnown RBP10.4□□□□□ -0.74
CAPN3-219ENST00000569136 CDK2AP1O14519 115 aa10.4□□□□□ -0.74
CAPN3-219ENST00000569136 FGBP02675 491 aa10.4□□□□□ -0.74
CAPN3-219ENST00000569136 PFKMP08237 780 aa10.4□□□□□ -0.74
CAPN3-219ENST00000569136 FAM86B2P0C5J1 330 aa10.4□□□□□ -0.74
CAPN3-219ENST00000569136 ARP10275 920 aa10.4□□□□□ -0.74
CAPN3-219ENST00000569136 PLA2G4AP47712 749 aa10.4□□□□□ -0.74
CAPN3-219ENST00000569136 HMGN5P82970 282 aaKnown RBP10.4□□□□□ -0.74
CAPN3-219ENST00000569136 NONOQ15233 471 aaKnown RBP eCLIP10.4□□□□□ -0.74
CAPN3-219ENST00000569136 Q4G0T1 1027 aa10.4□□□□□ -0.74
CAPN3-219ENST00000569136 PRR16Q569H4 304 aa10.4□□□□□ -0.74
CAPN3-219ENST00000569136 UTP14CQ5TAP6 766 aaKnown RBP10.4□□□□□ -0.74
CAPN3-219ENST00000569136 MOXD1Q6UVY6 613 aa10.4□□□□□ -0.74
CAPN3-219ENST00000569136 PLPPR4Q7Z2D5 763 aa10.4□□□□□ -0.74
CAPN3-219ENST00000569136 SLC9A9Q8IVB4 645 aa10.4□□□□□ -0.74
CAPN3-219ENST00000569136 GLG1Q92896 1179 aa10.4□□□□□ -0.74
CAPN3-219ENST00000569136 RIT2Q99578 217 aa10.4□□□□□ -0.74
CAPN3-219ENST00000569136 ZNF577Q9BSK1 485 aa10.4□□□□□ -0.74
CAPN3-219ENST00000569136 PHF20Q9BVI0 1012 aa10.4□□□□□ -0.74
CAPN3-219ENST00000569136 TSPAN10Q9H1Z9 355 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-219ENST00000569136 MTIF3Q9H2K0 278 aaKnown RBP10.4□□□□□ -0.74
CAPN3-219ENST00000569136 IL23AQ9NPF7 189 aa10.4□□□□□ -0.74
CAPN3-219ENST00000569136 TCEAL9Q9UHQ7 104 aa10.4□□□□□ -0.74
CAPN3-219ENST00000569136 IGLV3-22A0A075B6J6 115 aa10.39□□□□□ -0.75
CAPN3-219ENST00000569136 RRN3P2A6NIE6 340 aa10.39□□□□□ -0.75
CAPN3-219ENST00000569136 SORBS3O60504 671 aa10.39□□□□□ -0.75
CAPN3-219ENST00000569136 CAND2O75155 1236 aa10.39□□□□□ -0.75
CAPN3-219ENST00000569136 RPLP2P05387 115 aaKnown RBP10.39□□□□□ -0.75
CAPN3-219ENST00000569136 ZNF286BP0CG31 522 aa10.39□□□□□ -0.75
CAPN3-219ENST00000569136 CYP2C9P11712 490 aa10.39□□□□□ -0.75
CAPN3-219ENST00000569136 FDPSP14324 419 aaKnown RBP10.39□□□□□ -0.75
CAPN3-219ENST00000569136 CYP2C18P33260 490 aa10.39□□□□□ -0.75
CAPN3-219ENST00000569136 TCF7P36402 384 aaPredicted RBP10.39□□□□□ -0.75
CAPN3-219ENST00000569136 STAT5BP51692 787 aa10.39□□□□□ -0.75
CAPN3-219ENST00000569136 ACTR2P61160 394 aa10.39□□□□□ -0.75
CAPN3-219ENST00000569136 KRT76Q01546 638 aa10.39□□□□□ -0.75
CAPN3-219ENST00000569136 SP4Q02446 784 aa10.39□□□□□ -0.75
CAPN3-219ENST00000569136 PTSQ03393 145 aa10.39□□□□□ -0.75
CAPN3-219ENST00000569136 SAFBQ15424 915 aaKnown RBP eCLIP10.39□□□□□ -0.75
CAPN3-219ENST00000569136 SHHQ15465 462 aa10.39□□□□□ -0.75
CAPN3-219ENST00000569136 C4orf17Q53FE4 359 aa10.39□□□□□ -0.75
CAPN3-219ENST00000569136 TMEM164Q5U3C3 297 aa10.39□□□□□ -0.75
CAPN3-219ENST00000569136 GDF6Q6KF10 455 aaPredicted RBP10.39□□□□□ -0.75
CAPN3-219ENST00000569136 ZNF746Q6NUN9 644 aaPredicted RBP10.39□□□□□ -0.75
CAPN3-219ENST00000569136 MIS18BP1Q6P0N0 1132 aa10.39□□□□□ -0.75
CAPN3-219ENST00000569136 PSRC1Q6PGN9 363 aaPredicted RBP10.39□□□□□ -0.75
CAPN3-219ENST00000569136 SMAP1Q8IYB5 467 aaPredicted RBP10.39□□□□□ -0.75
CAPN3-219ENST00000569136 NSUN7Q8NE18 718 aaKnown RBP10.39□□□□□ -0.75
CAPN3-219ENST00000569136 RASGRP4Q8TDF6 673 aa10.39□□□□□ -0.75
CAPN3-219ENST00000569136 TBCKQ8TEA7 893 aa10.39□□□□□ -0.75
CAPN3-219ENST00000569136 AFAP1L1Q8TED9 768 aa10.39□□□□□ -0.75
CAPN3-219ENST00000569136 NIFKQ9BYG3 293 aaKnown RBP10.39□□□□□ -0.75
CAPN3-219ENST00000569136 RNPEPQ9H4A4 650 aa10.39□□□□□ -0.75
CAPN3-219ENST00000569136 TIMMDC1Q9NPL8 285 aa10.39□□□□□ -0.75
CAPN3-219ENST00000569136 SCHIP1Q9P0W5 487 aaPredicted RBP10.39□□□□□ -0.75
CAPN3-219ENST00000569136 KCNJ14Q9UNX9 436 aa10.39□□□□□ -0.75
CAPN3-219ENST00000569136 ZNF232Q9UNY5 417 aa10.39□□□□□ -0.75
CAPN3-219ENST00000569136 KIF3AQ9Y496 699 aa10.39□□□□□ -0.75
CAPN3-219ENST00000569136 USP3Q9Y6I4 520 aa10.39□□□□□ -0.75
CAPN3-219ENST00000569136 PLXNA1Q9UIW2 1896 aa10.38□□□□□ -0.75
CAPN3-219ENST00000569136 DHX15O43143 795 aaKnown RBP10.38□□□□□ -0.75
CAPN3-219ENST00000569136 IQCF3P0C7M6 154 aa10.38□□□□□ -0.75
CAPN3-219ENST00000569136 SMIM10L2AP0DMW4 78 aa10.38□□□□□ -0.75
CAPN3-219ENST00000569136 SMIM10L2BP0DMW5 78 aa10.38□□□□□ -0.75
CAPN3-219ENST00000569136 CSF2RAP15509 400 aa10.38□□□□□ -0.75
CAPN3-219ENST00000569136 SELPP16109 830 aa10.38□□□□□ -0.75
CAPN3-219ENST00000569136 GCFC2P16383 781 aaKnown RBP10.38□□□□□ -0.75
CAPN3-219ENST00000569136 HOXC8P31273 242 aa10.38□□□□□ -0.75
CAPN3-219ENST00000569136 KRT2P35908 639 aa10.38□□□□□ -0.75
CAPN3-219ENST00000569136 FXR1P51114 621 aaKnown RBP eCLIP10.38□□□□□ -0.75
CAPN3-219ENST00000569136 RBL2Q08999 1139 aa10.38□□□□□ -0.75
CAPN3-219ENST00000569136 ITGB3BPQ13352 177 aaPredicted RBP10.38□□□□□ -0.75
CAPN3-219ENST00000569136 NPY5RQ15761 445 aa10.38□□□□□ -0.75
CAPN3-219ENST00000569136 FAM160B1Q5W0V3 765 aa10.38□□□□□ -0.75
CAPN3-219ENST00000569136 PPP4R3AQ6IN85 833 aa10.38□□□□□ -0.75
CAPN3-219ENST00000569136 ABHD15Q6UXT9 468 aa10.38□□□□□ -0.75
CAPN3-219ENST00000569136 FAM43BQ6ZT52 329 aaPredicted RBP10.38□□□□□ -0.75
CAPN3-219ENST00000569136 SERINC5Q86VE9 423 aa10.38□□□□□ -0.75
CAPN3-219ENST00000569136 SCG3Q8WXD2 468 aaKnown RBP10.38□□□□□ -0.75
CAPN3-219ENST00000569136 ATP6V0A1Q93050 837 aa10.38□□□□□ -0.75
CAPN3-219ENST00000569136 FAM20AQ96MK3 541 aa10.38□□□□□ -0.75
CAPN3-219ENST00000569136 TBC1D32Q96NH3 1257 aa10.38□□□□□ -0.75
CAPN3-219ENST00000569136 AIFM3Q96NN9 605 aa10.38□□□□□ -0.75
CAPN3-219ENST00000569136 GAS2L1Q99501 681 aaPredicted RBP10.38□□□□□ -0.75
CAPN3-219ENST00000569136 BACH2Q9BYV9 841 aa10.38□□□□□ -0.75
CAPN3-219ENST00000569136 PCDHA10Q9Y5I2 948 aa10.38□□□□□ -0.75
CAPN3-219ENST00000569136 IGKV6D-21A0A0A0MT36 114 aa10.37□□□□□ -0.75
CAPN3-219ENST00000569136 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.37□□□□□ -0.75
CAPN3-219ENST00000569136 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.37□□□□□ -0.75
CAPN3-219ENST00000569136 ADAMTS3O15072 1205 aa10.37□□□□□ -0.75
CAPN3-219ENST00000569136 MSH4O15457 936 aa10.37□□□□□ -0.75
CAPN3-219ENST00000569136 PSAPP07602 524 aa10.37□□□□□ -0.75
CAPN3-219ENST00000569136 ACTN1P12814 892 aa10.37□□□□□ -0.75
CAPN3-219ENST00000569136 SFNP31947 248 aa10.37□□□□□ -0.75
CAPN3-219ENST00000569136 CCL23P55773 120 aa10.37□□□□□ -0.75
CAPN3-219ENST00000569136 TMEM240Q5SV17 173 aa10.37□□□□□ -0.75
CAPN3-219ENST00000569136 TAF2Q6P1X5 1199 aa10.37□□□□□ -0.75
CAPN3-219ENST00000569136 ZNF365Q70YC5 407 aa10.37□□□□□ -0.75
CAPN3-219ENST00000569136 C16orf59Q7L2K0 433 aa10.37□□□□□ -0.75
CAPN3-219ENST00000569136 NEK8Q86SG6 692 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms