RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 PAG1Q9NWQ8 432 aa9.45□□□□□ -0.9
CDH11-216ENST00000569128 CGGBP1Q9UFW8 167 aaPredicted RBP9.45□□□□□ -0.9
CDH11-216ENST00000569128 AKT3Q9Y243 479 aa9.45□□□□□ -0.9
CDH11-216ENST00000569128 ST14Q9Y5Y6 855 aa9.45□□□□□ -0.9
CDH11-216ENST00000569128 A0A1W2PQU0 124 aa9.44□□□□□ -0.9
CDH11-216ENST00000569128 YDJCA8MPS7 323 aa9.44□□□□□ -0.9
CDH11-216ENST00000569128 WASH4PA8MWX3 477 aa9.44□□□□□ -0.9
CDH11-216ENST00000569128 ECE2O60344 883 aa9.44□□□□□ -0.9
CDH11-216ENST00000569128 TGFB1P01137 390 aa9.44□□□□□ -0.9
CDH11-216ENST00000569128 FOSL1P15407 271 aa9.44□□□□□ -0.9
CDH11-216ENST00000569128 IARSP41252 1262 aaKnown RBP9.44□□□□□ -0.9
CDH11-216ENST00000569128 EPHB1P54762 984 aa9.44□□□□□ -0.9
CDH11-216ENST00000569128 NFKB2Q00653 900 aa9.44□□□□□ -0.9
CDH11-216ENST00000569128 SUPT20HQ8NEM7 779 aa9.44□□□□□ -0.9
CDH11-216ENST00000569128 NETO1Q8TDF5 533 aa9.44□□□□□ -0.9
CDH11-216ENST00000569128 EVI5LQ96CN4 794 aa9.44□□□□□ -0.9
CDH11-216ENST00000569128 RCC1LQ96I51 464 aaKnown RBP9.44□□□□□ -0.9
CDH11-216ENST00000569128 ZDHHC15Q96MV8 337 aa9.44□□□□□ -0.9
CDH11-216ENST00000569128 GPR62Q9BZJ7 368 aa9.44□□□□□ -0.9
CDH11-216ENST00000569128 COA1Q9GZY4 146 aa9.44□□□□□ -0.9
CDH11-216ENST00000569128 TAOK3Q9H2K8 898 aa9.44□□□□□ -0.9
CDH11-216ENST00000569128 GNL3LQ9NVN8 582 aaKnown RBP9.44□□□□□ -0.9
CDH11-216ENST00000569128 PRR13Q9NZ81 148 aa9.44□□□□□ -0.9
CDH11-216ENST00000569128 ZC3H7BQ9UGR2 993 aaKnown RBP9.44□□□□□ -0.9
CDH11-216ENST00000569128 DENND2AQ9ULE3 1009 aa9.44□□□□□ -0.9
CDH11-216ENST00000569128 FER1L6Q2WGJ9 1857 aa9.44□□□□□ -0.9
CDH11-216ENST00000569128 MYO5AQ9Y4I1 1855 aaKnown RBP9.44□□□□□ -0.9
CDH11-216ENST00000569128 ARFGEF1Q9Y6D6 1849 aa9.43□□□□□ -0.9
CDH11-216ENST00000569128 H3BS24 57 aa9.43□□□□□ -0.9
CDH11-216ENST00000569128 NOP56O00567 594 aaKnown RBP9.43□□□□□ -0.9
CDH11-216ENST00000569128 TBX1O43435 398 aa9.43□□□□□ -0.9
CDH11-216ENST00000569128 ADCY3O60266 1144 aa9.43□□□□□ -0.9
CDH11-216ENST00000569128 SRFP11831 508 aa9.43□□□□□ -0.9
CDH11-216ENST00000569128 RHBDL3P58872 404 aa9.43□□□□□ -0.9
CDH11-216ENST00000569128 PABPC4Q13310 644 aaKnown RBP eCLIP9.43□□□□□ -0.9
CDH11-216ENST00000569128 CNTROBQ8N137 903 aa9.43□□□□□ -0.9
CDH11-216ENST00000569128 ARHGEF39Q8N4T4 335 aa9.43□□□□□ -0.9
CDH11-216ENST00000569128 KBTBD3Q8NAB2 608 aa9.43□□□□□ -0.9
CDH11-216ENST00000569128 FSD1Q9BTV5 496 aa9.43□□□□□ -0.9
CDH11-216ENST00000569128 HDAC8Q9BY41 377 aa9.43□□□□□ -0.9
CDH11-216ENST00000569128 IL25Q9H293 177 aa9.43□□□□□ -0.9
CDH11-216ENST00000569128 GPATCH2Q9NW75 528 aa9.43□□□□□ -0.9
CDH11-216ENST00000569128 ZSWIM5Q9P217 1185 aa9.43□□□□□ -0.9
CDH11-216ENST00000569128 DIS3Q9Y2L1 958 aaKnown RBP9.43□□□□□ -0.9
CDH11-216ENST00000569128 EMC9Q9Y3B6 208 aa9.43□□□□□ -0.9
CDH11-216ENST00000569128 H0Y8X5 98 aa9.42□□□□□ -0.9
CDH11-216ENST00000569128 IDH1O75874 414 aaKnown RBP9.42□□□□□ -0.9
CDH11-216ENST00000569128 CHMLP26374 656 aa9.42□□□□□ -0.9
CDH11-216ENST00000569128 PPP2R2AP63151 447 aa9.42□□□□□ -0.9
CDH11-216ENST00000569128 GPR162Q16538 588 aa9.42□□□□□ -0.9
CDH11-216ENST00000569128 NFE2Q16621 373 aaPredicted RBP9.42□□□□□ -0.9
CDH11-216ENST00000569128 IFI16Q16666 785 aaKnown RBP9.42□□□□□ -0.9
CDH11-216ENST00000569128 TTLL5Q6EMB2 1281 aa9.42□□□□□ -0.9
CDH11-216ENST00000569128 RNF180Q86T96 592 aa9.42□□□□□ -0.9
CDH11-216ENST00000569128 RAVER1Q8IY67 606 aaKnown RBP9.42□□□□□ -0.9
CDH11-216ENST00000569128 CERS5Q8N5B7 392 aa9.42□□□□□ -0.9
CDH11-216ENST00000569128 ZNF384Q8TF68 577 aa9.42□□□□□ -0.9
CDH11-216ENST00000569128 MRGPRX3Q96LB0 322 aa9.42□□□□□ -0.9
CDH11-216ENST00000569128 FAM227BQ96M60 508 aa9.42□□□□□ -0.9
CDH11-216ENST00000569128 SEC62Q99442 399 aaKnown RBP9.42□□□□□ -0.9
CDH11-216ENST00000569128 TRIT1Q9H3H1 467 aaKnown RBP9.42□□□□□ -0.9
CDH11-216ENST00000569128 ABCF2Q9UG63 623 aa9.42□□□□□ -0.9
CDH11-216ENST00000569128 SCN9AQ15858 1988 aa9.42□□□□□ -0.9
CDH11-216ENST00000569128 FAM205AQ6ZU69 1335 aa9.41□□□□□ -0.9
CDH11-216ENST00000569128 RAD17O75943 681 aa9.41□□□□□ -0.9
CDH11-216ENST00000569128 KCNH1O95259 989 aa9.41□□□□□ -0.9
CDH11-216ENST00000569128 PRDX5P30044 214 aa9.41□□□□□ -0.9
CDH11-216ENST00000569128 CTSKP43235 329 aa9.41□□□□□ -0.9
CDH11-216ENST00000569128 CLCN7P51798 805 aa9.41□□□□□ -0.9
CDH11-216ENST00000569128 TTF1Q15361 905 aaPredicted RBP9.41□□□□□ -0.9
CDH11-216ENST00000569128 POMZP3Q6PJE2 187 aa9.41□□□□□ -0.9
CDH11-216ENST00000569128 DAGLBQ8NCG7 672 aa9.41□□□□□ -0.9
CDH11-216ENST00000569128 ENOX1Q8TC92 643 aaKnown RBP9.41□□□□□ -0.9
CDH11-216ENST00000569128 UBE2FQ969M7 185 aa9.41□□□□□ -0.9
CDH11-216ENST00000569128 ARHGEF4Q9NR80 690 aa9.41□□□□□ -0.9
CDH11-216ENST00000569128 MAPRE3Q9UPY8 281 aa9.41□□□□□ -0.9
CDH11-216ENST00000569128 SF3B6Q9Y3B4 125 aaKnown RBP9.41□□□□□ -0.9
CDH11-216ENST00000569128 TMEM265A0A087WTH1 108 aa9.4□□□□□ -0.9
CDH11-216ENST00000569128 A0A0D9SFI3 127 aa9.4□□□□□ -0.9
CDH11-216ENST00000569128 TCRBV5S4A2TA0A5A2 114 aa9.4□□□□□ -0.9
CDH11-216ENST00000569128 F8W031 263 aaPredicted RBP9.4□□□□□ -0.9
CDH11-216ENST00000569128 PSMD14O00487 310 aa9.4□□□□□ -0.9
CDH11-216ENST00000569128 RNF113AO15541 343 aaKnown RBP9.4□□□□□ -0.9
CDH11-216ENST00000569128 TSPAN6O43657 245 aa9.4□□□□□ -0.9
CDH11-216ENST00000569128 PDE6AP16499 860 aa9.4□□□□□ -0.9
CDH11-216ENST00000569128 TPP2P29144 1249 aaPredicted RBP9.4□□□□□ -0.9
CDH11-216ENST00000569128 ADD2P35612 726 aa9.4□□□□□ -0.9
CDH11-216ENST00000569128 CXCL9Q07325 125 aa9.4□□□□□ -0.9
CDH11-216ENST00000569128 BIRC2Q13490 618 aa9.4□□□□□ -0.9
CDH11-216ENST00000569128 HSP90AA2PQ14568 343 aaPredicted RBP9.4□□□□□ -0.9
CDH11-216ENST00000569128 MFSD14BQ5SR56 506 aa9.4□□□□□ -0.9
CDH11-216ENST00000569128 DACT2Q5SW24 774 aa9.4□□□□□ -0.9
CDH11-216ENST00000569128 SLC9C2Q5TAH2 1124 aa9.4□□□□□ -0.9
CDH11-216ENST00000569128 WWC2Q6AWC2 1192 aa9.4□□□□□ -0.9
CDH11-216ENST00000569128 CRTC3Q6UUV7 619 aa9.4□□□□□ -0.9
CDH11-216ENST00000569128 CWC27Q6UX04 472 aaKnown RBP9.4□□□□□ -0.9
CDH11-216ENST00000569128 CCDC129Q6ZRS4 1044 aa9.4□□□□□ -0.9
CDH11-216ENST00000569128 TSPYL5Q86VY4 417 aaPredicted RBP9.4□□□□□ -0.9
CDH11-216ENST00000569128 WDR75Q8IWA0 830 aaKnown RBP9.4□□□□□ -0.9
CDH11-216ENST00000569128 TRIM59Q8IWR1 403 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms