RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 SLC24A5Q71RS6 500 aa8.78□□□□□ -1
CDH3-209ENST00000569080 C4orf19Q8IY42 314 aa8.78□□□□□ -1
CDH3-209ENST00000569080 ZNF710Q8N1W2 664 aa8.78□□□□□ -1
CDH3-209ENST00000569080 SYMPKQ92797 1274 aaKnown RBP8.78□□□□□ -1
CDH3-209ENST00000569080 P2RX5Q93086 422 aa8.78□□□□□ -1
CDH3-209ENST00000569080 HLA-CQ95604 372 aa8.78□□□□□ -1
CDH3-209ENST00000569080 ZNF668Q96K58 619 aaPredicted RBP8.78□□□□□ -1
CDH3-209ENST00000569080 NECAB3Q96P71 396 aaPredicted RBP8.78□□□□□ -1
CDH3-209ENST00000569080 MTMR9Q96QG7 549 aa8.78□□□□□ -1
CDH3-209ENST00000569080 LLPHQ9BRT6 129 aaKnown RBP8.78□□□□□ -1
CDH3-209ENST00000569080 C11orf84Q9BUA3 381 aaPredicted RBP8.78□□□□□ -1
CDH3-209ENST00000569080 PLVAPQ9BX97 442 aa8.78□□□□□ -1
CDH3-209ENST00000569080 DHX33Q9H6R0 707 aaKnown RBP8.78□□□□□ -1
CDH3-209ENST00000569080 BRMS1Q9HCU9 246 aa8.78□□□□□ -1
CDH3-209ENST00000569080 CYP26B1Q9NR63 512 aa8.78□□□□□ -1
CDH3-209ENST00000569080 TMEM161AQ9NX61 479 aa8.78□□□□□ -1
CDH3-209ENST00000569080 RGL1Q9NZL6 768 aa8.78□□□□□ -1
CDH3-209ENST00000569080 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.77□□□□□ -1.01
CDH3-209ENST00000569080 DENND3A2RUS2 1198 aa8.77□□□□□ -1.01
CDH3-209ENST00000569080 NEMFO60524 1076 aa8.77□□□□□ -1.01
CDH3-209ENST00000569080 CSDE1O75534 798 aaKnown RBP8.77□□□□□ -1.01
CDH3-209ENST00000569080 LYPLA2O95372 231 aa8.77□□□□□ -1.01
CDH3-209ENST00000569080 CD2BP2O95400 341 aaKnown RBP8.77□□□□□ -1.01
CDH3-209ENST00000569080 ITGB1P05556 798 aa8.77□□□□□ -1.01
CDH3-209ENST00000569080 P4HBP07237 508 aaKnown RBP8.77□□□□□ -1.01
CDH3-209ENST00000569080 STAG3L1P0CL83 205 aa8.77□□□□□ -1.01
CDH3-209ENST00000569080 FGFR1P11362 822 aa8.77□□□□□ -1.01
CDH3-209ENST00000569080 FGFR4P22455 802 aa8.77□□□□□ -1.01
CDH3-209ENST00000569080 DNAJB1P25685 340 aa8.77□□□□□ -1.01
CDH3-209ENST00000569080 EPHA7Q15375 998 aa8.77□□□□□ -1.01
CDH3-209ENST00000569080 PTPROQ16827 1216 aa8.77□□□□□ -1.01
CDH3-209ENST00000569080 TCEAL5Q5H9L2 206 aa8.77□□□□□ -1.01
CDH3-209ENST00000569080 ODR4Q5SWX8 454 aa8.77□□□□□ -1.01
CDH3-209ENST00000569080 FAM102BQ5T8I3 360 aa8.77□□□□□ -1.01
CDH3-209ENST00000569080 NCAPH2Q6IBW4 605 aa8.77□□□□□ -1.01
CDH3-209ENST00000569080 ZNF598Q86UK7 904 aaKnown RBP8.77□□□□□ -1.01
CDH3-209ENST00000569080 ZNF410Q86VK4 478 aa8.77□□□□□ -1.01
CDH3-209ENST00000569080 SLFN12Q8IYM2 578 aa8.77□□□□□ -1.01
CDH3-209ENST00000569080 DYDC2Q96IM9 177 aa8.77□□□□□ -1.01
CDH3-209ENST00000569080 UHRF1Q96T88 793 aaPredicted RBP8.77□□□□□ -1.01
CDH3-209ENST00000569080 HSD17B14Q9BPX1 270 aa8.77□□□□□ -1.01
CDH3-209ENST00000569080 LMAN2LQ9H0V9 348 aa8.77□□□□□ -1.01
CDH3-209ENST00000569080 TMEM60Q9H2L4 133 aa8.77□□□□□ -1.01
CDH3-209ENST00000569080 ELAC1Q9H777 363 aaKnown RBP8.77□□□□□ -1.01
CDH3-209ENST00000569080 UBE2ZQ9H832 354 aaPredicted RBP8.77□□□□□ -1.01
CDH3-209ENST00000569080 XPNPEP1Q9NQW7 623 aa8.77□□□□□ -1.01
CDH3-209ENST00000569080 SH2B1Q9NRF2 756 aaPredicted RBP8.77□□□□□ -1.01
CDH3-209ENST00000569080 PLAGL2Q9UPG8 496 aa8.77□□□□□ -1.01
CDH3-209ENST00000569080 PPME1Q9Y570 386 aa8.77□□□□□ -1.01
CDH3-209ENST00000569080 TRIOO75962 3097 aa8.77□□□□□ -1.01
CDH3-209ENST00000569080 A0A087WZ62 844 aa8.76□□□□□ -1.01
CDH3-209ENST00000569080 POTEMA6NI47 508 aa8.76□□□□□ -1.01
CDH3-209ENST00000569080 DDX11L8A8MPP1 907 aa8.76□□□□□ -1.01
CDH3-209ENST00000569080 ZBTB39O15060 712 aa8.76□□□□□ -1.01
CDH3-209ENST00000569080 SLITRK3O94933 977 aa8.76□□□□□ -1.01
CDH3-209ENST00000569080 YWHABP31946 246 aaKnown RBP8.76□□□□□ -1.01
CDH3-209ENST00000569080 HMGN5P82970 282 aaKnown RBP8.76□□□□□ -1.01
CDH3-209ENST00000569080 GUCY1B3Q02153 619 aa8.76□□□□□ -1.01
CDH3-209ENST00000569080 CYP4A11Q02928 519 aa8.76□□□□□ -1.01
CDH3-209ENST00000569080 CTTNQ14247 550 aaKnown RBP8.76□□□□□ -1.01
CDH3-209ENST00000569080 CALCRLQ16602 461 aa8.76□□□□□ -1.01
CDH3-209ENST00000569080 AAK1Q2M2I8 961 aa8.76□□□□□ -1.01
CDH3-209ENST00000569080 CTC1Q2NKJ3 1217 aa8.76□□□□□ -1.01
CDH3-209ENST00000569080 LEXMQ3ZCV2 418 aa8.76□□□□□ -1.01
CDH3-209ENST00000569080 CLLU1OSQ5K130 101 aa8.76□□□□□ -1.01
CDH3-209ENST00000569080 ECHDC2Q86YB7 292 aa8.76□□□□□ -1.01
CDH3-209ENST00000569080 KSR1Q8IVT5 923 aa8.76□□□□□ -1.01
CDH3-209ENST00000569080 KLHL23Q8NBE8 558 aa8.76□□□□□ -1.01
CDH3-209ENST00000569080 FBXO18Q8NFZ0 1043 aa8.76□□□□□ -1.01
CDH3-209ENST00000569080 SPPL3Q8TCT6 385 aa8.76□□□□□ -1.01
CDH3-209ENST00000569080 NEK9Q8TD19 979 aa8.76□□□□□ -1.01
CDH3-209ENST00000569080 NLRP7Q8WX94 980 aa8.76□□□□□ -1.01
CDH3-209ENST00000569080 C8orf76Q96K31 380 aa8.76□□□□□ -1.01
CDH3-209ENST00000569080 ZSCAN31Q96LW9 406 aaPredicted RBP8.76□□□□□ -1.01
CDH3-209ENST00000569080 EIF2AK1Q9BQI3 630 aaKnown RBP8.76□□□□□ -1.01
CDH3-209ENST00000569080 FDXACB1Q9BRP7 624 aaPredicted RBP8.76□□□□□ -1.01
CDH3-209ENST00000569080 TRAIPQ9BWF2 469 aa8.76□□□□□ -1.01
CDH3-209ENST00000569080 NSUN3Q9H649 340 aaKnown RBP8.76□□□□□ -1.01
CDH3-209ENST00000569080 CWH43Q9H720 699 aa8.76□□□□□ -1.01
CDH3-209ENST00000569080 IFT122Q9HBG6 1241 aa8.76□□□□□ -1.01
CDH3-209ENST00000569080 ALG13Q9NP73 1137 aaKnown RBP8.76□□□□□ -1.01
CDH3-209ENST00000569080 SUCLA2Q9P2R7 463 aaPredicted RBP8.76□□□□□ -1.01
CDH3-209ENST00000569080 PCDHB7Q9Y5E2 793 aa8.76□□□□□ -1.01
CDH3-209ENST00000569080 A0A0U1RQF3 1178 aa8.75□□□□□ -1.01
CDH3-209ENST00000569080 TBKBP1A7MCY6 615 aa8.75□□□□□ -1.01
CDH3-209ENST00000569080 TNFRSF10AO00220 468 aa8.75□□□□□ -1.01
CDH3-209ENST00000569080 DKC1O60832 514 aaKnown RBP eCLIP8.75□□□□□ -1.01
CDH3-209ENST00000569080 KCNA5P22460 613 aa8.75□□□□□ -1.01
CDH3-209ENST00000569080 IRS1P35568 1242 aa8.75□□□□□ -1.01
CDH3-209ENST00000569080 LTBRP36941 435 aa8.75□□□□□ -1.01
CDH3-209ENST00000569080 RFC5P40937 340 aa8.75□□□□□ -1.01
CDH3-209ENST00000569080 HYAL1Q12794 435 aa8.75□□□□□ -1.01
CDH3-209ENST00000569080 TRIM29Q14134 588 aa8.75□□□□□ -1.01
CDH3-209ENST00000569080 EMC2Q15006 297 aa8.75□□□□□ -1.01
CDH3-209ENST00000569080 RABEP1Q15276 862 aa8.75□□□□□ -1.01
CDH3-209ENST00000569080 NAALADL2Q58DX5 795 aa8.75□□□□□ -1.01
CDH3-209ENST00000569080 LRRC55Q6ZSA7 311 aa8.75□□□□□ -1.01
CDH3-209ENST00000569080 ADGRD2Q7Z7M1 963 aa8.75□□□□□ -1.01
CDH3-209ENST00000569080 RHPN2Q8IUC4 686 aa8.75□□□□□ -1.01
CDH3-209ENST00000569080 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms