RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 FGFR1P11362 822 aa17.01■□□□□ 0.31
COMMD4-223ENST00000568301 CPA1P15085 419 aa17.01■□□□□ 0.31
COMMD4-223ENST00000568301 LAG3P18627 525 aa17.01■□□□□ 0.31
COMMD4-223ENST00000568301 HSPA4P34932 840 aa17.01■□□□□ 0.31
COMMD4-223ENST00000568301 USP11P51784 963 aa17.01■□□□□ 0.31
COMMD4-223ENST00000568301 NLRP11P59045 1033 aaKnown RBP17.01■□□□□ 0.31
COMMD4-223ENST00000568301 PLCB3Q01970 1234 aa17.01■□□□□ 0.31
COMMD4-223ENST00000568301 NTRK3Q16288 839 aa17.01■□□□□ 0.31
COMMD4-223ENST00000568301 EFCAB12Q6NXP0 572 aa17.01■□□□□ 0.31
COMMD4-223ENST00000568301 BLOC1S2Q6QNY1 142 aa17.01■□□□□ 0.31
COMMD4-223ENST00000568301 TRMT1LQ7Z2T5 733 aaKnown RBP17.01■□□□□ 0.31
COMMD4-223ENST00000568301 THNSL1Q8IYQ7 743 aa17.01■□□□□ 0.31
COMMD4-223ENST00000568301 LINC01465Q8N7H1 131 aa17.01■□□□□ 0.31
COMMD4-223ENST00000568301 CCDC148Q8NFR7 591 aa17.01■□□□□ 0.31
COMMD4-223ENST00000568301 JAKMIP1Q96N16 626 aaKnown RBP17.01■□□□□ 0.31
COMMD4-223ENST00000568301 MAP7D2Q96T17 732 aa17.01■□□□□ 0.31
COMMD4-223ENST00000568301 PPP1R16BQ96T49 567 aa17.01■□□□□ 0.31
COMMD4-223ENST00000568301 RIT2Q99578 217 aa17.01■□□□□ 0.31
COMMD4-223ENST00000568301 RNF26Q9BY78 433 aaPredicted RBP17.01■□□□□ 0.31
COMMD4-223ENST00000568301 S1PR5Q9H228 398 aa17.01■□□□□ 0.31
COMMD4-223ENST00000568301 ADAMTS10Q9H324 1103 aa17.01■□□□□ 0.31
COMMD4-223ENST00000568301 CWH43Q9H720 699 aa17.01■□□□□ 0.31
COMMD4-223ENST00000568301 PUF60Q9UHX1 559 aaKnown RBP17.01■□□□□ 0.31
COMMD4-223ENST00000568301 CACNA1HO95180 2353 aa17.01■□□□□ 0.31
COMMD4-223ENST00000568301 ST18O60284 1047 aa17■□□□□ 0.31
COMMD4-223ENST00000568301 ZSCAN20P17040 1043 aaPredicted RBP17■□□□□ 0.31
COMMD4-223ENST00000568301 EIF4BP23588 611 aaKnown RBP17■□□□□ 0.31
COMMD4-223ENST00000568301 KCNC3Q14003 757 aa17■□□□□ 0.31
COMMD4-223ENST00000568301 TMEM184AQ6ZMB5 413 aa17■□□□□ 0.31
COMMD4-223ENST00000568301 PHKBQ93100 1093 aa17■□□□□ 0.31
COMMD4-223ENST00000568301 APOL5Q9BWW9 433 aa17■□□□□ 0.31
COMMD4-223ENST00000568301 DISC1Q9NRI5 854 aa17■□□□□ 0.31
COMMD4-223ENST00000568301 AKT3Q9Y243 479 aa17■□□□□ 0.31
COMMD4-223ENST00000568301 SNX14Q9Y5W7 946 aa17■□□□□ 0.31
COMMD4-223ENST00000568301 MSH4O15457 936 aa16.99■□□□□ 0.31
COMMD4-223ENST00000568301 EDIL3O43854 480 aa16.99■□□□□ 0.31
COMMD4-223ENST00000568301 ZNF862O60290 1169 aa16.99■□□□□ 0.31
COMMD4-223ENST00000568301 IFNAR1P17181 557 aa16.99■□□□□ 0.31
COMMD4-223ENST00000568301 RPS6KB1P23443 525 aa16.99■□□□□ 0.31
COMMD4-223ENST00000568301 AVPR2P30518 371 aa16.99■□□□□ 0.31
COMMD4-223ENST00000568301 SFNP31947 248 aa16.99■□□□□ 0.31
COMMD4-223ENST00000568301 TECP42680 631 aa16.99■□□□□ 0.31
COMMD4-223ENST00000568301 CLCN3P51790 818 aa16.99■□□□□ 0.31
COMMD4-223ENST00000568301 EVCP57679 992 aa16.99■□□□□ 0.31
COMMD4-223ENST00000568301 PTPN21Q16825 1174 aa16.99■□□□□ 0.31
COMMD4-223ENST00000568301 PLPP4Q5VZY2 271 aa16.99■□□□□ 0.31
COMMD4-223ENST00000568301 LRRC55Q6ZSA7 311 aa16.99■□□□□ 0.31
COMMD4-223ENST00000568301 RASGRP4Q8TDF6 673 aa16.99■□□□□ 0.31
COMMD4-223ENST00000568301 MRPS27Q92552 414 aaKnown RBP16.99■□□□□ 0.31
COMMD4-223ENST00000568301 CASD1Q96PB1 797 aa16.99■□□□□ 0.31
COMMD4-223ENST00000568301 NGRNQ9NPE2 291 aaKnown RBP16.99■□□□□ 0.31
COMMD4-223ENST00000568301 SH3GLB2Q9NR46 395 aa16.99■□□□□ 0.31
COMMD4-223ENST00000568301 WDR87Q6ZQQ6 2873 aa16.99■□□□□ 0.31
COMMD4-223ENST00000568301 OATP04181 439 aa16.98■□□□□ 0.31
COMMD4-223ENST00000568301 SRGAP2BP0DMP2 458 aa16.98■□□□□ 0.31
COMMD4-223ENST00000568301 SP100P23497 879 aaPredicted RBP16.98■□□□□ 0.31
COMMD4-223ENST00000568301 PSMA5P28066 241 aa16.98■□□□□ 0.31
COMMD4-223ENST00000568301 PPM1AP35813 382 aa16.98■□□□□ 0.31
COMMD4-223ENST00000568301 CDC42EP1Q00587 391 aa16.98■□□□□ 0.31
COMMD4-223ENST00000568301 ANKRD54Q6NXT1 300 aa16.98■□□□□ 0.31
COMMD4-223ENST00000568301 LLGL2Q6P1M3 1020 aa16.98■□□□□ 0.31
COMMD4-223ENST00000568301 SYCE2Q6PIF2 218 aa16.98■□□□□ 0.31
COMMD4-223ENST00000568301 KCNT2Q6UVM3 1135 aa16.98■□□□□ 0.31
COMMD4-223ENST00000568301 ECHDC2Q86YB7 292 aa16.98■□□□□ 0.31
COMMD4-223ENST00000568301 ABI1Q8IZP0 508 aa16.98■□□□□ 0.31
COMMD4-223ENST00000568301 SLC5A5Q92911 643 aa16.98■□□□□ 0.31
COMMD4-223ENST00000568301 CCDC136Q96JN2 1154 aa16.98■□□□□ 0.31
COMMD4-223ENST00000568301 RNF19AQ9NV58 838 aa16.98■□□□□ 0.31
COMMD4-223ENST00000568301 A0A0U1RQF3 1178 aa16.97■□□□□ 0.31
COMMD4-223ENST00000568301 HIDE1A8MVS5 230 aa16.97■□□□□ 0.31
COMMD4-223ENST00000568301 GFRA3O60609 400 aa16.97■□□□□ 0.31
COMMD4-223ENST00000568301 GAS7O60861 476 aa16.97■□□□□ 0.31
COMMD4-223ENST00000568301 EOMESO95936 686 aa16.97■□□□□ 0.31
COMMD4-223ENST00000568301 PDGFBP01127 241 aaPredicted RBP16.97■□□□□ 0.31
COMMD4-223ENST00000568301 DARSP14868 501 aaKnown RBP16.97■□□□□ 0.31
COMMD4-223ENST00000568301 PDIA3P30101 505 aaKnown RBP16.97■□□□□ 0.31
COMMD4-223ENST00000568301 GPC3P51654 580 aa16.97■□□□□ 0.31
COMMD4-223ENST00000568301 JAK3P52333 1124 aa16.97■□□□□ 0.31
COMMD4-223ENST00000568301 PRKCEQ02156 737 aa16.97■□□□□ 0.31
COMMD4-223ENST00000568301 KRT17Q04695 432 aa16.97■□□□□ 0.31
COMMD4-223ENST00000568301 LRRC43Q8N309 656 aa16.97■□□□□ 0.31
COMMD4-223ENST00000568301 LRRC71Q8N4P6 559 aa16.97■□□□□ 0.31
COMMD4-223ENST00000568301 RDM1Q8NG50 284 aa16.97■□□□□ 0.31
COMMD4-223ENST00000568301 ZNF558Q96NG5 402 aa16.97■□□□□ 0.31
COMMD4-223ENST00000568301 TCF25Q9BQ70 676 aa16.97■□□□□ 0.31
COMMD4-223ENST00000568301 SLC26A6Q9BXS9 759 aa16.97■□□□□ 0.31
COMMD4-223ENST00000568301 C22orf23Q9BZE7 217 aa16.97■□□□□ 0.31
COMMD4-223ENST00000568301 VPS54Q9P1Q0 977 aa16.97■□□□□ 0.31
COMMD4-223ENST00000568301 CDH22Q9UJ99 828 aa16.97■□□□□ 0.31
COMMD4-223ENST00000568301 MYO10Q9HD67 2058 aa16.97■□□□□ 0.31
COMMD4-223ENST00000568301 NLRP5P59047 1200 aa16.96■□□□□ 0.31
COMMD4-223ENST00000568301 TBC1D8BQ0IIM8 1120 aa16.96■□□□□ 0.31
COMMD4-223ENST00000568301 TARBP2Q15633 366 aaKnown RBP16.96■□□□□ 0.31
COMMD4-223ENST00000568301 LRCH2Q5VUJ6 765 aa16.96■□□□□ 0.31
COMMD4-223ENST00000568301 ATOH1Q92858 354 aaPredicted RBP16.96■□□□□ 0.31
COMMD4-223ENST00000568301 RIPOR3Q96MK2 946 aa16.96■□□□□ 0.31
COMMD4-223ENST00000568301 TEKT3Q9BXF9 490 aa16.96■□□□□ 0.31
COMMD4-223ENST00000568301 NIFKQ9BYG3 293 aaKnown RBP16.96■□□□□ 0.31
COMMD4-223ENST00000568301 ENTPD7Q9NQZ7 604 aa16.96■□□□□ 0.31
COMMD4-223ENST00000568301 DACT1Q9NYF0 836 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms