RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 EME2A4GXA9 379 aaPredicted RBP11.73□□□□□ -0.53
PALB2-206ENST00000568219 USP17L15C9J2P7 530 aa11.73□□□□□ -0.53
PALB2-206ENST00000568219 USP17L13C9JLJ4 530 aa11.73□□□□□ -0.53
PALB2-206ENST00000568219 USP17L11C9JVI0 530 aa11.73□□□□□ -0.53
PALB2-206ENST00000568219 USP17L18D6R9N7 530 aa11.73□□□□□ -0.53
PALB2-206ENST00000568219 USP17L22D6RA61 530 aa11.73□□□□□ -0.53
PALB2-206ENST00000568219 USP17L17D6RBQ6 530 aa11.73□□□□□ -0.53
PALB2-206ENST00000568219 USP17L19D6RCP7 530 aa11.73□□□□□ -0.53
PALB2-206ENST00000568219 USP17L20D6RJB6 530 aa11.73□□□□□ -0.53
PALB2-206ENST00000568219 GYG2O15488 501 aa11.73□□□□□ -0.53
PALB2-206ENST00000568219 ATMINO43313 823 aaPredicted RBP11.73□□□□□ -0.53
PALB2-206ENST00000568219 CIB2O75838 187 aa11.73□□□□□ -0.53
PALB2-206ENST00000568219 FTLP02792 175 aaPredicted RBP11.73□□□□□ -0.53
PALB2-206ENST00000568219 CNGA1P29973 690 aa11.73□□□□□ -0.53
PALB2-206ENST00000568219 RCAN1P53805 252 aa11.73□□□□□ -0.53
PALB2-206ENST00000568219 USP17L24Q0WX57 530 aa11.73□□□□□ -0.53
PALB2-206ENST00000568219 C10orf76Q5T2E6 689 aa11.73□□□□□ -0.53
PALB2-206ENST00000568219 USP17L6PQ6QN14 398 aa11.73□□□□□ -0.53
PALB2-206ENST00000568219 PIGOQ8TEQ8 1089 aa11.73□□□□□ -0.53
PALB2-206ENST00000568219 DNAJC9Q8WXX5 260 aa11.73□□□□□ -0.53
PALB2-206ENST00000568219 INPP4AQ96PE3 977 aaPredicted RBP11.73□□□□□ -0.53
PALB2-206ENST00000568219 ZNF148Q9UQR1 794 aa11.73□□□□□ -0.53
PALB2-206ENST00000568219 USP17L5A8MUK1 530 aa11.73□□□□□ -0.53
PALB2-206ENST00000568219 KIF3CO14782 793 aa11.73□□□□□ -0.53
PALB2-206ENST00000568219 SERPINB4P48594 390 aa11.73□□□□□ -0.53
PALB2-206ENST00000568219 XRCC4Q13426 336 aa11.73□□□□□ -0.53
PALB2-206ENST00000568219 ERMARDQ5T6L9 678 aa11.73□□□□□ -0.53
PALB2-206ENST00000568219 STXBP4Q6ZWJ1 553 aa11.73□□□□□ -0.53
PALB2-206ENST00000568219 KCTD1Q719H9 257 aa11.73□□□□□ -0.53
PALB2-206ENST00000568219 KCNG1Q9UIX4 513 aa11.73□□□□□ -0.53
PALB2-206ENST00000568219 GOLGA8RI6L899 631 aa11.73□□□□□ -0.53
PALB2-206ENST00000568219 PHLDB3Q6NSJ2 640 aa11.73□□□□□ -0.53
PALB2-206ENST00000568219 ZNF653Q96CK0 615 aa11.73□□□□□ -0.53
PALB2-206ENST00000568219 TMX4Q9H1E5 349 aaPredicted RBP11.73□□□□□ -0.53
PALB2-206ENST00000568219 RTCBQ9Y3I0 505 aaKnown RBP11.73□□□□□ -0.53
PALB2-206ENST00000568219 PNPLA7Q6ZV29 1317 aa11.73□□□□□ -0.53
PALB2-206ENST00000568219 GOLGA8SH3BPF8 625 aa11.72□□□□□ -0.53
PALB2-206ENST00000568219 GOLGA8MH3BSY2 632 aa11.72□□□□□ -0.53
PALB2-206ENST00000568219 SNAP25P60880 206 aa11.72□□□□□ -0.53
PALB2-206ENST00000568219 CLEC10AQ8IUN9 316 aa11.72□□□□□ -0.53
PALB2-206ENST00000568219 BAP1Q92560 729 aa11.72□□□□□ -0.53
PALB2-206ENST00000568219 DNAJC8O75937 253 aaPredicted RBP11.72□□□□□ -0.53
PALB2-206ENST00000568219 FECHP22830 423 aa11.72□□□□□ -0.53
PALB2-206ENST00000568219 CD302Q8IX05 232 aa11.72□□□□□ -0.53
PALB2-206ENST00000568219 PROM2Q8N271 834 aa11.72□□□□□ -0.53
PALB2-206ENST00000568219 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.72□□□□□ -0.53
PALB2-206ENST00000568219 GPR101Q96P66 508 aaPredicted RBP11.72□□□□□ -0.53
PALB2-206ENST00000568219 BRIP1Q9BX63 1249 aa11.72□□□□□ -0.53
PALB2-206ENST00000568219 EDEM3Q9BZQ6 932 aa11.72□□□□□ -0.53
PALB2-206ENST00000568219 STOML1Q9UBI4 398 aa11.72□□□□□ -0.53
PALB2-206ENST00000568219 PPP1R9AQ9ULJ8 1098 aa11.72□□□□□ -0.53
PALB2-206ENST00000568219 ALG6Q9Y672 507 aa11.72□□□□□ -0.53
PALB2-206ENST00000568219 PODXLO00592 558 aa11.72□□□□□ -0.53
PALB2-206ENST00000568219 PPFIA2O75334 1257 aa11.72□□□□□ -0.53
PALB2-206ENST00000568219 POTEJP0CG39 1038 aa11.72□□□□□ -0.53
PALB2-206ENST00000568219 UBXN2AP68543 259 aa11.72□□□□□ -0.53
PALB2-206ENST00000568219 GRB10Q13322 594 aa11.72□□□□□ -0.53
PALB2-206ENST00000568219 RBM26Q5T8P6 1007 aaKnown RBP11.72□□□□□ -0.53
PALB2-206ENST00000568219 DGKHQ86XP1 1220 aa11.72□□□□□ -0.53
PALB2-206ENST00000568219 FBXO41Q8TF61 875 aa11.72□□□□□ -0.53
PALB2-206ENST00000568219 TBC1D22AQ8WUA7 517 aa11.72□□□□□ -0.53
PALB2-206ENST00000568219 PIK3R5Q8WYR1 880 aa11.72□□□□□ -0.53
PALB2-206ENST00000568219 LZTS2Q9BRK4 669 aa11.72□□□□□ -0.53
PALB2-206ENST00000568219 METTL14Q9HCE5 456 aaKnown RBP11.72□□□□□ -0.53
PALB2-206ENST00000568219 CTNNAL1Q9UBT7 734 aa11.72□□□□□ -0.53
PALB2-206ENST00000568219 ZFP69BQ9UJL9 534 aa11.72□□□□□ -0.53
PALB2-206ENST00000568219 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.72□□□□□ -0.53
PALB2-206ENST00000568219 NR2E1Q9Y466 385 aa11.72□□□□□ -0.53
PALB2-206ENST00000568219 ESRRAP11474 423 aaPredicted RBP11.71□□□□□ -0.53
PALB2-206ENST00000568219 RFC5P40937 340 aa11.71□□□□□ -0.53
PALB2-206ENST00000568219 COG7P83436 770 aa11.71□□□□□ -0.53
PALB2-206ENST00000568219 CDR2Q01850 454 aa11.71□□□□□ -0.53
PALB2-206ENST00000568219 MDH1BQ5I0G3 518 aa11.71□□□□□ -0.53
PALB2-206ENST00000568219 CTAGE3PQ8IX95 158 aa11.71□□□□□ -0.53
PALB2-206ENST00000568219 FAM178BQ8IXR5 827 aa11.71□□□□□ -0.53
PALB2-206ENST00000568219 MAP3K7O43318 606 aa11.71□□□□□ -0.53
PALB2-206ENST00000568219 C21orf2O43822 256 aa11.71□□□□□ -0.53
PALB2-206ENST00000568219 SLC37A4O43826 429 aa11.71□□□□□ -0.53
PALB2-206ENST00000568219 TLR2O60603 784 aa11.71□□□□□ -0.53
PALB2-206ENST00000568219 NR3C1P04150 777 aa11.71□□□□□ -0.53
PALB2-206ENST00000568219 CPA2P48052 419 aa11.71□□□□□ -0.53
PALB2-206ENST00000568219 RPS8P62241 208 aaKnown RBP11.71□□□□□ -0.53
PALB2-206ENST00000568219 OVGP1Q12889 678 aa11.71□□□□□ -0.53
PALB2-206ENST00000568219 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.71□□□□□ -0.53
PALB2-206ENST00000568219 TRIM59Q8IWR1 403 aa11.71□□□□□ -0.53
PALB2-206ENST00000568219 HAUS1Q96CS2 278 aa11.71□□□□□ -0.53
PALB2-206ENST00000568219 BTBD6Q96KE9 485 aa11.71□□□□□ -0.53
PALB2-206ENST00000568219 TTYH3Q9C0H2 523 aa11.71□□□□□ -0.53
PALB2-206ENST00000568219 NPHS2Q9NP85 383 aa11.71□□□□□ -0.53
PALB2-206ENST00000568219 SLC4A7Q9Y6M7 1214 aa11.71□□□□□ -0.53
PALB2-206ENST00000568219 CLDN3O15551 220 aa11.71□□□□□ -0.54
PALB2-206ENST00000568219 GHRP10912 638 aa11.71□□□□□ -0.54
PALB2-206ENST00000568219 CHRM1P11229 460 aaPredicted RBP11.71□□□□□ -0.54
PALB2-206ENST00000568219 KCNA3P22001 575 aa11.71□□□□□ -0.54
PALB2-206ENST00000568219 PPP1R21Q6ZMI0 780 aa11.71□□□□□ -0.54
PALB2-206ENST00000568219 SMIM5Q71RC9 77 aa11.71□□□□□ -0.54
PALB2-206ENST00000568219 KCNK18Q7Z418 384 aa11.71□□□□□ -0.54
PALB2-206ENST00000568219 MREGQ8N565 214 aa11.71□□□□□ -0.54
PALB2-206ENST00000568219 MIPOL1Q8TD10 442 aa11.71□□□□□ -0.54
PALB2-206ENST00000568219 SH3RF3Q8TEJ3 882 aaPredicted RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms