RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 BMP15O95972 392 aa10.93□□□□□ -0.66
CLK3-220ENST00000567992 MYOGP15173 224 aa10.93□□□□□ -0.66
CLK3-220ENST00000567992 MUTP22033 750 aa10.93□□□□□ -0.66
CLK3-220ENST00000567992 CCT6AP40227 531 aaKnown RBP10.93□□□□□ -0.66
CLK3-220ENST00000567992 KCNJ6P48051 423 aa10.93□□□□□ -0.66
CLK3-220ENST00000567992 PAK2Q13177 524 aa10.93□□□□□ -0.66
CLK3-220ENST00000567992 HYIQ5T013 277 aa10.93□□□□□ -0.66
CLK3-220ENST00000567992 KCNK18Q7Z418 384 aa10.93□□□□□ -0.66
CLK3-220ENST00000567992 RTN4RL1Q86UN2 441 aaPredicted RBP10.93□□□□□ -0.66
CLK3-220ENST00000567992 KSR1Q8IVT5 923 aa10.93□□□□□ -0.66
CLK3-220ENST00000567992 CRIPAKQ8N1N5 446 aa10.93□□□□□ -0.66
CLK3-220ENST00000567992 TMEM143Q96AN5 459 aa10.93□□□□□ -0.66
CLK3-220ENST00000567992 PNMA5Q96PV4 448 aa10.93□□□□□ -0.66
CLK3-220ENST00000567992 NACC1Q96RE7 527 aa10.93□□□□□ -0.66
CLK3-220ENST00000567992 MTRQ99707 1265 aa10.93□□□□□ -0.66
CLK3-220ENST00000567992 JPH2Q9BR39 696 aaPredicted RBP10.93□□□□□ -0.66
CLK3-220ENST00000567992 RAB34Q9BZG1 259 aa10.93□□□□□ -0.66
CLK3-220ENST00000567992 ZSCAN16Q9H4T2 348 aaPredicted RBP10.93□□□□□ -0.66
CLK3-220ENST00000567992 RC3H2Q9HBD1 1191 aaKnown RBP10.93□□□□□ -0.66
CLK3-220ENST00000567992 SUCLA2Q9P2R7 463 aaPredicted RBP10.93□□□□□ -0.66
CLK3-220ENST00000567992 PCDHA11Q9Y5I1 949 aa10.93□□□□□ -0.66
CLK3-220ENST00000567992 MORC2Q9Y6X9 1032 aaPredicted RBP10.93□□□□□ -0.66
CLK3-220ENST00000567992 A0A087WZ62 844 aa10.92□□□□□ -0.66
CLK3-220ENST00000567992 LCHNA4D1U4 455 aa10.92□□□□□ -0.66
CLK3-220ENST00000567992 ENPP3O14638 875 aa10.92□□□□□ -0.66
CLK3-220ENST00000567992 GAS2O43903 313 aaKnown RBP10.92□□□□□ -0.66
CLK3-220ENST00000567992 RPS6KA5O75582 802 aa10.92□□□□□ -0.66
CLK3-220ENST00000567992 F13A1P00488 732 aa10.92□□□□□ -0.66
CLK3-220ENST00000567992 HSP90AA1P07900 732 aaKnown RBP10.92□□□□□ -0.66
CLK3-220ENST00000567992 ZSCAN22P10073 491 aaPredicted RBP10.92□□□□□ -0.66
CLK3-220ENST00000567992 DARSP14868 501 aaKnown RBP10.92□□□□□ -0.66
CLK3-220ENST00000567992 EIF4BP23588 611 aaKnown RBP10.92□□□□□ -0.66
CLK3-220ENST00000567992 ARL2P36404 184 aa10.92□□□□□ -0.66
CLK3-220ENST00000567992 NASPP49321 788 aaPredicted RBP10.92□□□□□ -0.66
CLK3-220ENST00000567992 DSC3Q14574 896 aa10.92□□□□□ -0.66
CLK3-220ENST00000567992 RAB30Q15771 203 aa10.92□□□□□ -0.66
CLK3-220ENST00000567992 TMEM119Q4V9L6 283 aa10.92□□□□□ -0.66
CLK3-220ENST00000567992 ZNF410Q86VK4 478 aa10.92□□□□□ -0.66
CLK3-220ENST00000567992 RHPN2Q8IUC4 686 aa10.92□□□□□ -0.66
CLK3-220ENST00000567992 MYOCDQ8IZQ8 938 aa10.92□□□□□ -0.66
CLK3-220ENST00000567992 ZNF710Q8N1W2 664 aa10.92□□□□□ -0.66
CLK3-220ENST00000567992 ASAP3Q8TDY4 903 aa10.92□□□□□ -0.66
CLK3-220ENST00000567992 LRRC15Q8TF66 581 aa10.92□□□□□ -0.66
CLK3-220ENST00000567992 PRPF31Q8WWY3 499 aaKnown RBP10.92□□□□□ -0.66
CLK3-220ENST00000567992 TIFAQ96CG3 184 aa10.92□□□□□ -0.66
CLK3-220ENST00000567992 FDXACB1Q9BRP7 624 aaPredicted RBP10.92□□□□□ -0.66
CLK3-220ENST00000567992 TSPYL2Q9H2G4 693 aaPredicted RBP10.92□□□□□ -0.66
CLK3-220ENST00000567992 ATP6V0A4Q9HBG4 840 aa10.92□□□□□ -0.66
CLK3-220ENST00000567992 IFT122Q9HBG6 1241 aa10.92□□□□□ -0.66
CLK3-220ENST00000567992 DDX19AQ9NUU7 478 aaKnown RBP10.92□□□□□ -0.66
CLK3-220ENST00000567992 FBXO2Q9UK22 296 aaPredicted RBP10.92□□□□□ -0.66
CLK3-220ENST00000567992 ST3GAL5Q9UNP4 418 aa10.92□□□□□ -0.66
CLK3-220ENST00000567992 KIAA1024Q9UPX6 916 aa10.92□□□□□ -0.66
CLK3-220ENST00000567992 ZDHHC9Q9Y397 364 aa10.92□□□□□ -0.66
CLK3-220ENST00000567992 COL4A3BPQ9Y5P4 624 aa10.92□□□□□ -0.66
CLK3-220ENST00000567992 KIAA1671Q9BY89 1806 aa10.92□□□□□ -0.66
CLK3-220ENST00000567992 SPTBN5Q9NRC6 3674 aaKnown RBP10.91□□□□□ -0.66
CLK3-220ENST00000567992 TMEM265A0A087WTH1 108 aa10.91□□□□□ -0.66
CLK3-220ENST00000567992 E9PMD0 336 aa10.91□□□□□ -0.66
CLK3-220ENST00000567992 USO1O60763 962 aaKnown RBP10.91□□□□□ -0.66
CLK3-220ENST00000567992 CSDE1O75534 798 aaKnown RBP10.91□□□□□ -0.66
CLK3-220ENST00000567992 AMHP03971 560 aa10.91□□□□□ -0.66
CLK3-220ENST00000567992 CA3P07451 260 aa10.91□□□□□ -0.66
CLK3-220ENST00000567992 DNM2P50570 870 aa10.91□□□□□ -0.66
CLK3-220ENST00000567992 HTRA4P83105 476 aaPredicted RBP10.91□□□□□ -0.66
CLK3-220ENST00000567992 LAMTOR4Q0VGL1 99 aa10.91□□□□□ -0.66
CLK3-220ENST00000567992 GRB10Q13322 594 aa10.91□□□□□ -0.66
CLK3-220ENST00000567992 FOXD4L5Q5VV16 416 aaPredicted RBP10.91□□□□□ -0.66
CLK3-220ENST00000567992 KRT79Q5XKE5 535 aa10.91□□□□□ -0.66
CLK3-220ENST00000567992 PADI6Q6TGC4 694 aa10.91□□□□□ -0.66
CLK3-220ENST00000567992 SPRED2Q7Z698 418 aa10.91□□□□□ -0.66
CLK3-220ENST00000567992 EXOC8Q8IYI6 725 aa10.91□□□□□ -0.66
CLK3-220ENST00000567992 NLRP7Q8WX94 980 aa10.91□□□□□ -0.66
CLK3-220ENST00000567992 PSPC1Q8WXF1 523 aaKnown RBP10.91□□□□□ -0.66
CLK3-220ENST00000567992 FOXD4L4Q8WXT5 416 aaPredicted RBP10.91□□□□□ -0.66
CLK3-220ENST00000567992 TOP1MTQ969P6 601 aa10.91□□□□□ -0.66
CLK3-220ENST00000567992 AK8Q96MA6 479 aa10.91□□□□□ -0.66
CLK3-220ENST00000567992 GUCD1Q96NT3 240 aa10.91□□□□□ -0.66
CLK3-220ENST00000567992 FTHL17Q9BXU8 183 aa10.91□□□□□ -0.66
CLK3-220ENST00000567992 BHMT2Q9H2M3 363 aa10.91□□□□□ -0.66
CLK3-220ENST00000567992 NKX2-4Q9H2Z4 354 aa10.91□□□□□ -0.66
CLK3-220ENST00000567992 MINDY3Q9H8M7 445 aa10.91□□□□□ -0.66
CLK3-220ENST00000567992 GPRC5CQ9NQ84 441 aa10.91□□□□□ -0.66
CLK3-220ENST00000567992 STK24Q9Y6E0 443 aa10.91□□□□□ -0.66
CLK3-220ENST00000567992 RALGAPA2Q2PPJ7 1873 aa10.91□□□□□ -0.66
CLK3-220ENST00000567992 NLRC5Q86WI3 1866 aa10.91□□□□□ -0.66
CLK3-220ENST00000567992 FNDC1Q4ZHG4 1894 aaPredicted RBP10.9□□□□□ -0.66
CLK3-220ENST00000567992 EYA4O95677 639 aa10.9□□□□□ -0.66
CLK3-220ENST00000567992 BRD1O95696 1058 aa10.9□□□□□ -0.66
CLK3-220ENST00000567992 PDIA4P13667 645 aaKnown RBP10.9□□□□□ -0.66
CLK3-220ENST00000567992 CYP11B2P19099 503 aa10.9□□□□□ -0.66
CLK3-220ENST00000567992 FGFR4P22455 802 aa10.9□□□□□ -0.66
CLK3-220ENST00000567992 GLRA2P23416 452 aa10.9□□□□□ -0.66
CLK3-220ENST00000567992 MARCKSP29966 332 aaPredicted RBP10.9□□□□□ -0.66
CLK3-220ENST00000567992 LONP1P36776 959 aaKnown RBP10.9□□□□□ -0.66
CLK3-220ENST00000567992 CDC42EP1Q00587 391 aa10.9□□□□□ -0.66
CLK3-220ENST00000567992 CEBPZQ03701 1054 aaKnown RBP10.9□□□□□ -0.66
CLK3-220ENST00000567992 NFX1Q12986 1120 aaKnown RBP10.9□□□□□ -0.66
CLK3-220ENST00000567992 CAPSQ13938 189 aa10.9□□□□□ -0.66
CLK3-220ENST00000567992 SLC39A14Q15043 492 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms