RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 MOXD1Q6UVY6 613 aa13.74□□□□□ -0.21
GTF3C1-208ENST00000567843 RBM23Q86U06 439 aaKnown RBP13.74□□□□□ -0.21
GTF3C1-208ENST00000567843 POTEDQ86YR6 584 aa13.74□□□□□ -0.21
GTF3C1-208ENST00000567843 KSR1Q8IVT5 923 aa13.74□□□□□ -0.21
GTF3C1-208ENST00000567843 ZNF579Q8NAF0 562 aaKnown RBP13.74□□□□□ -0.21
GTF3C1-208ENST00000567843 SPPL3Q8TCT6 385 aa13.74□□□□□ -0.21
GTF3C1-208ENST00000567843 POF1BQ8WVV4 589 aa13.74□□□□□ -0.21
GTF3C1-208ENST00000567843 PABPC5Q96DU9 382 aaKnown RBP13.74□□□□□ -0.21
GTF3C1-208ENST00000567843 ATP6V0A4Q9HBG4 840 aa13.74□□□□□ -0.21
GTF3C1-208ENST00000567843 C1orf112Q9NSG2 853 aa13.74□□□□□ -0.21
GTF3C1-208ENST00000567843 TYW1Q9NV66 732 aaKnown RBP13.74□□□□□ -0.21
GTF3C1-208ENST00000567843 NLRC5Q86WI3 1866 aa13.74□□□□□ -0.21
GTF3C1-208ENST00000567843 A0A087WZ62 844 aa13.73□□□□□ -0.21
GTF3C1-208ENST00000567843 DARSP14868 501 aaKnown RBP13.73□□□□□ -0.21
GTF3C1-208ENST00000567843 ZSCAN20P17040 1043 aaPredicted RBP13.73□□□□□ -0.21
GTF3C1-208ENST00000567843 EIF4BP23588 611 aaKnown RBP13.73□□□□□ -0.21
GTF3C1-208ENST00000567843 LONRF3Q496Y0 759 aa13.73□□□□□ -0.21
GTF3C1-208ENST00000567843 NCAPH2Q6IBW4 605 aa13.73□□□□□ -0.21
GTF3C1-208ENST00000567843 ADGRD2Q7Z7M1 963 aa13.73□□□□□ -0.21
GTF3C1-208ENST00000567843 RDM1Q8NG50 284 aa13.73□□□□□ -0.21
GTF3C1-208ENST00000567843 NEK9Q8TD19 979 aa13.73□□□□□ -0.21
GTF3C1-208ENST00000567843 MICAL1Q8TDZ2 1067 aa13.73□□□□□ -0.21
GTF3C1-208ENST00000567843 HAS1Q92839 578 aa13.73□□□□□ -0.21
GTF3C1-208ENST00000567843 GTF3C6Q969F1 213 aa13.73□□□□□ -0.21
GTF3C1-208ENST00000567843 CEP89Q96ST8 783 aa13.73□□□□□ -0.21
GTF3C1-208ENST00000567843 FDXACB1Q9BRP7 624 aaPredicted RBP13.73□□□□□ -0.21
GTF3C1-208ENST00000567843 PLVAPQ9BX97 442 aa13.73□□□□□ -0.21
GTF3C1-208ENST00000567843 NIFKQ9BYG3 293 aaKnown RBP13.73□□□□□ -0.21
GTF3C1-208ENST00000567843 LMAN2LQ9H0V9 348 aa13.73□□□□□ -0.21
GTF3C1-208ENST00000567843 KCNMB3Q9NPA1 279 aa13.73□□□□□ -0.21
GTF3C1-208ENST00000567843 SUCLA2Q9P2R7 463 aaPredicted RBP13.73□□□□□ -0.21
GTF3C1-208ENST00000567843 WRAP73Q9P2S5 460 aaPredicted RBP13.73□□□□□ -0.21
GTF3C1-208ENST00000567843 VAV3Q9UKW4 847 aa13.73□□□□□ -0.21
GTF3C1-208ENST00000567843 GRXCR2A6NFK2 248 aa13.72□□□□□ -0.21
GTF3C1-208ENST00000567843 MMP1P03956 469 aa13.72□□□□□ -0.21
GTF3C1-208ENST00000567843 SSTR3P32745 418 aaPredicted RBP13.72□□□□□ -0.21
GTF3C1-208ENST00000567843 KRT2P35908 639 aa13.72□□□□□ -0.21
GTF3C1-208ENST00000567843 LTBRP36941 435 aa13.72□□□□□ -0.21
GTF3C1-208ENST00000567843 PBX3P40426 434 aa13.72□□□□□ -0.21
GTF3C1-208ENST00000567843 PSMC5P62195 406 aa13.72□□□□□ -0.21
GTF3C1-208ENST00000567843 GUCY1B3Q02153 619 aa13.72□□□□□ -0.21
GTF3C1-208ENST00000567843 CYP4A11Q02928 519 aa13.72□□□□□ -0.21
GTF3C1-208ENST00000567843 PPP4R3AQ6IN85 833 aa13.72□□□□□ -0.21
GTF3C1-208ENST00000567843 ANO5Q75V66 913 aa13.72□□□□□ -0.21
GTF3C1-208ENST00000567843 RHPN2Q8IUC4 686 aa13.72□□□□□ -0.21
GTF3C1-208ENST00000567843 NSUN7Q8NE18 718 aaKnown RBP13.72□□□□□ -0.21
GTF3C1-208ENST00000567843 P2RX5Q93086 422 aa13.72□□□□□ -0.21
GTF3C1-208ENST00000567843 RNF19AQ9NV58 838 aa13.72□□□□□ -0.21
GTF3C1-208ENST00000567843 TMEM161AQ9NX61 479 aa13.72□□□□□ -0.21
GTF3C1-208ENST00000567843 RGL1Q9NZL6 768 aa13.72□□□□□ -0.21
GTF3C1-208ENST00000567843 BTBD18B2RXH4 712 aa13.71□□□□□ -0.21
GTF3C1-208ENST00000567843 WNT7AO00755 349 aa13.71□□□□□ -0.21
GTF3C1-208ENST00000567843 ZBTB39O15060 712 aa13.71□□□□□ -0.21
GTF3C1-208ENST00000567843 MAFO75444 373 aaPredicted RBP13.71□□□□□ -0.21
GTF3C1-208ENST00000567843 ATP2B1P20020 1258 aa13.71□□□□□ -0.21
GTF3C1-208ENST00000567843 QARSP47897 775 aaKnown RBP13.71□□□□□ -0.21
GTF3C1-208ENST00000567843 NRIP1P48552 1158 aa13.71□□□□□ -0.21
GTF3C1-208ENST00000567843 FAM189BP81408 668 aa13.71□□□□□ -0.21
GTF3C1-208ENST00000567843 ST3GAL1Q11201 340 aa13.71□□□□□ -0.21
GTF3C1-208ENST00000567843 CTTNQ14247 550 aaKnown RBP13.71□□□□□ -0.21
GTF3C1-208ENST00000567843 LRRC55Q6ZSA7 311 aa13.71□□□□□ -0.21
GTF3C1-208ENST00000567843 ECHDC2Q86YB7 292 aa13.71□□□□□ -0.21
GTF3C1-208ENST00000567843 FAM178BQ8IXR5 827 aa13.71□□□□□ -0.21
GTF3C1-208ENST00000567843 THNSL1Q8IYQ7 743 aa13.71□□□□□ -0.21
GTF3C1-208ENST00000567843 FAM177A1Q8N128 213 aaPredicted RBP13.71□□□□□ -0.21
GTF3C1-208ENST00000567843 WASF1Q92558 559 aa13.71□□□□□ -0.21
GTF3C1-208ENST00000567843 DYDC2Q96IM9 177 aa13.71□□□□□ -0.21
GTF3C1-208ENST00000567843 NLRP4Q96MN2 994 aa13.71□□□□□ -0.21
GTF3C1-208ENST00000567843 CASD1Q96PB1 797 aa13.71□□□□□ -0.21
GTF3C1-208ENST00000567843 GCOM2Q9BZD3 368 aaPredicted RBP13.71□□□□□ -0.21
GTF3C1-208ENST00000567843 PCDHB12Q9Y5F1 795 aa13.71□□□□□ -0.21
GTF3C1-208ENST00000567843 A0A087WWV3 80 aa13.7□□□□□ -0.22
GTF3C1-208ENST00000567843 IGKV6-21A0A0C4DH24 114 aa13.7□□□□□ -0.22
GTF3C1-208ENST00000567843 PER2O15055 1255 aa13.7□□□□□ -0.22
GTF3C1-208ENST00000567843 TBX10O75333 385 aa13.7□□□□□ -0.22
GTF3C1-208ENST00000567843 FGF18O76093 207 aa13.7□□□□□ -0.22
GTF3C1-208ENST00000567843 GCFC2P16383 781 aaKnown RBP13.7□□□□□ -0.22
GTF3C1-208ENST00000567843 COL9A1P20849 921 aa13.7□□□□□ -0.22
GTF3C1-208ENST00000567843 DNM2P50570 870 aa13.7□□□□□ -0.22
GTF3C1-208ENST00000567843 ERVFC1P60507 584 aa13.7□□□□□ -0.22
GTF3C1-208ENST00000567843 RBM10P98175 930 aaKnown RBP13.7□□□□□ -0.22
GTF3C1-208ENST00000567843 PPP2R5CQ13362 524 aa13.7□□□□□ -0.22
GTF3C1-208ENST00000567843 DIS3L2Q8IYB7 885 aaKnown RBP13.7□□□□□ -0.22
GTF3C1-208ENST00000567843 GJD3Q8N144 294 aa13.7□□□□□ -0.22
GTF3C1-208ENST00000567843 COLGALT1Q8NBJ5 622 aa13.7□□□□□ -0.22
GTF3C1-208ENST00000567843 HELQQ8TDG4 1101 aa13.7□□□□□ -0.22
GTF3C1-208ENST00000567843 TNFRSF25Q93038 417 aa13.7□□□□□ -0.22
GTF3C1-208ENST00000567843 LPPQ93052 612 aa13.7□□□□□ -0.22
GTF3C1-208ENST00000567843 TMEM143Q96AN5 459 aa13.7□□□□□ -0.22
GTF3C1-208ENST00000567843 CEP170P1Q96L14 293 aa13.7□□□□□ -0.22
GTF3C1-208ENST00000567843 FAM20AQ96MK3 541 aa13.7□□□□□ -0.22
GTF3C1-208ENST00000567843 LXNQ9BS40 222 aa13.7□□□□□ -0.22
GTF3C1-208ENST00000567843 CWH43Q9H720 699 aa13.7□□□□□ -0.22
GTF3C1-208ENST00000567843 BRMS1Q9HCU9 246 aa13.7□□□□□ -0.22
GTF3C1-208ENST00000567843 CYP26B1Q9NR63 512 aa13.7□□□□□ -0.22
GTF3C1-208ENST00000567843 RALGAPA2Q2PPJ7 1873 aa13.7□□□□□ -0.22
GTF3C1-208ENST00000567843 FAM86C2PA6NEL3 165 aa13.69□□□□□ -0.22
GTF3C1-208ENST00000567843 CENPBP07199 599 aaPredicted RBP13.69□□□□□ -0.22
GTF3C1-208ENST00000567843 P4HBP07237 508 aaKnown RBP13.69□□□□□ -0.22
GTF3C1-208ENST00000567843 NDUFV1P49821 464 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms