RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 SLC7A3Q8WY07 619 aa12.55□□□□□ -0.4
CDH3-206ENST00000567674 HAS1Q92839 578 aa12.55□□□□□ -0.4
CDH3-206ENST00000567674 PPP2R3CQ969Q6 453 aa12.55□□□□□ -0.4
CDH3-206ENST00000567674 GCOM2Q9BZD3 368 aaPredicted RBP12.55□□□□□ -0.4
CDH3-206ENST00000567674 TMX1Q9H3N1 280 aa12.55□□□□□ -0.4
CDH3-206ENST00000567674 CYP26B1Q9NR63 512 aa12.55□□□□□ -0.4
CDH3-206ENST00000567674 STK39Q9UEW8 545 aa12.55□□□□□ -0.4
CDH3-206ENST00000567674 LRFN2Q9ULH4 789 aa12.55□□□□□ -0.4
CDH3-206ENST00000567674 AKT3Q9Y243 479 aa12.55□□□□□ -0.4
CDH3-206ENST00000567674 NOC2LQ9Y3T9 749 aaKnown RBP12.55□□□□□ -0.4
CDH3-206ENST00000567674 SIP14410 1827 aa12.54□□□□□ -0.4
CDH3-206ENST00000567674 A0A0U1RQF3 1178 aa12.54□□□□□ -0.4
CDH3-206ENST00000567674 SLC37A4O43826 429 aa12.54□□□□□ -0.4
CDH3-206ENST00000567674 ST18O60284 1047 aa12.54□□□□□ -0.4
CDH3-206ENST00000567674 SEC24BO95487 1268 aa12.54□□□□□ -0.4
CDH3-206ENST00000567674 LINC00271P0C7V0 271 aa12.54□□□□□ -0.4
CDH3-206ENST00000567674 DARSP14868 501 aaKnown RBP12.54□□□□□ -0.4
CDH3-206ENST00000567674 NLRP11P59045 1033 aaKnown RBP12.54□□□□□ -0.4
CDH3-206ENST00000567674 SPIRE1Q08AE8 756 aa12.54□□□□□ -0.4
CDH3-206ENST00000567674 GPM6BQ13491 265 aa12.54□□□□□ -0.4
CDH3-206ENST00000567674 DSC3Q14574 896 aa12.54□□□□□ -0.4
CDH3-206ENST00000567674 RABEP1Q15276 862 aa12.54□□□□□ -0.4
CDH3-206ENST00000567674 KIZQ2M2Z5 673 aa12.54□□□□□ -0.4
CDH3-206ENST00000567674 C8orf34Q49A92 452 aa12.54□□□□□ -0.4
CDH3-206ENST00000567674 KRT40Q6A162 431 aa12.54□□□□□ -0.4
CDH3-206ENST00000567674 TMCO2Q7Z6W1 182 aaPredicted RBP12.54□□□□□ -0.4
CDH3-206ENST00000567674 DIS3L2Q8IYB7 885 aaKnown RBP12.54□□□□□ -0.4
CDH3-206ENST00000567674 KCTD17Q8N5Z5 321 aa12.54□□□□□ -0.4
CDH3-206ENST00000567674 FBXO18Q8NFZ0 1043 aa12.54□□□□□ -0.4
CDH3-206ENST00000567674 LINC01599Q8WXQ3 324 aa12.54□□□□□ -0.4
CDH3-206ENST00000567674 MTMR9Q96QG7 549 aa12.54□□□□□ -0.4
CDH3-206ENST00000567674 ADAM2Q99965 735 aa12.54□□□□□ -0.4
CDH3-206ENST00000567674 HSD17B14Q9BPX1 270 aa12.54□□□□□ -0.4
CDH3-206ENST00000567674 C17orf80Q9BSJ5 609 aa12.54□□□□□ -0.4
CDH3-206ENST00000567674 KCNH6Q9H252 994 aa12.54□□□□□ -0.4
CDH3-206ENST00000567674 DHX33Q9H6R0 707 aaKnown RBP12.54□□□□□ -0.4
CDH3-206ENST00000567674 ANKEF1Q9NU02 776 aa12.54□□□□□ -0.4
CDH3-206ENST00000567674 RALGAPA2Q2PPJ7 1873 aa12.54□□□□□ -0.4
CDH3-206ENST00000567674 TCF20Q9UGU0 1960 aaKnown RBP12.53□□□□□ -0.4
CDH3-206ENST00000567674 BTBD18B2RXH4 712 aa12.53□□□□□ -0.4
CDH3-206ENST00000567674 CHMP2AO43633 222 aa12.53□□□□□ -0.4
CDH3-206ENST00000567674 NEMFO60524 1076 aa12.53□□□□□ -0.4
CDH3-206ENST00000567674 ZNF623O75123 536 aa12.53□□□□□ -0.4
CDH3-206ENST00000567674 SFPQP23246 707 aaKnown RBP eCLIP12.53□□□□□ -0.4
CDH3-206ENST00000567674 MXD4Q14582 209 aaPredicted RBP12.53□□□□□ -0.4
CDH3-206ENST00000567674 FAM117BQ6P1L5 589 aa12.53□□□□□ -0.4
CDH3-206ENST00000567674 ANO5Q75V66 913 aa12.53□□□□□ -0.4
CDH3-206ENST00000567674 SRGAP1Q7Z6B7 1085 aa12.53□□□□□ -0.4
CDH3-206ENST00000567674 FAM228AQ86W67 206 aa12.53□□□□□ -0.4
CDH3-206ENST00000567674 NECAB1Q8N987 351 aa12.53□□□□□ -0.4
CDH3-206ENST00000567674 OXER1Q8TDS5 423 aa12.53□□□□□ -0.4
CDH3-206ENST00000567674 TMEM40Q8WWA1 233 aa12.53□□□□□ -0.4
CDH3-206ENST00000567674 KHSRPQ92945 711 aaKnown RBP eCLIP12.53□□□□□ -0.4
CDH3-206ENST00000567674 NFKBIZQ9BYH8 718 aa12.53□□□□□ -0.4
CDH3-206ENST00000567674 NSUN3Q9H649 340 aaKnown RBP12.53□□□□□ -0.4
CDH3-206ENST00000567674 CERS4Q9HA82 394 aa12.53□□□□□ -0.4
CDH3-206ENST00000567674 ATP6V0A4Q9HBG4 840 aa12.53□□□□□ -0.4
CDH3-206ENST00000567674 FAM50BQ9Y247 325 aa12.53□□□□□ -0.4
CDH3-206ENST00000567674 LZTS1Q9Y250 596 aa12.53□□□□□ -0.4
CDH3-206ENST00000567674 PCDHB12Q9Y5F1 795 aa12.53□□□□□ -0.4
CDH3-206ENST00000567674 CACNA1AO00555 2505 aa12.52□□□□□ -0.4
CDH3-206ENST00000567674 DDX11L8A8MPP1 907 aa12.52□□□□□ -0.41
CDH3-206ENST00000567674 RFXAPO00287 272 aa12.52□□□□□ -0.41
CDH3-206ENST00000567674 LAD1O00515 517 aa12.52□□□□□ -0.41
CDH3-206ENST00000567674 SLITRK3O94933 977 aa12.52□□□□□ -0.41
CDH3-206ENST00000567674 VTNP04004 478 aa12.52□□□□□ -0.41
CDH3-206ENST00000567674 AXLP30530 894 aa12.52□□□□□ -0.41
CDH3-206ENST00000567674 RAB27AP51159 221 aa12.52□□□□□ -0.41
CDH3-206ENST00000567674 CLCN3P51790 818 aa12.52□□□□□ -0.41
CDH3-206ENST00000567674 NHLH1Q02575 133 aa12.52□□□□□ -0.41
CDH3-206ENST00000567674 TMEM62Q0P6H9 643 aa12.52□□□□□ -0.41
CDH3-206ENST00000567674 NR5A1Q13285 461 aa12.52□□□□□ -0.41
CDH3-206ENST00000567674 CALCRLQ16602 461 aa12.52□□□□□ -0.41
CDH3-206ENST00000567674 UGCGQ16739 394 aa12.52□□□□□ -0.41
CDH3-206ENST00000567674 LEXMQ3ZCV2 418 aa12.52□□□□□ -0.41
CDH3-206ENST00000567674 BANK1Q8NDB2 785 aa12.52□□□□□ -0.41
CDH3-206ENST00000567674 C8orf76Q96K31 380 aa12.52□□□□□ -0.41
CDH3-206ENST00000567674 OSMRQ99650 979 aa12.52□□□□□ -0.41
CDH3-206ENST00000567674 KIF2CQ99661 725 aa12.52□□□□□ -0.41
CDH3-206ENST00000567674 TMEM117Q9H0C3 514 aa12.52□□□□□ -0.41
CDH3-206ENST00000567674 CDHR5Q9HBB8 845 aa12.52□□□□□ -0.41
CDH3-206ENST00000567674 SEPT9Q9UHD8 586 aaPredicted RBP12.52□□□□□ -0.41
CDH3-206ENST00000567674 EML1O00423 815 aa12.51□□□□□ -0.41
CDH3-206ENST00000567674 DGAT1O75907 488 aa12.51□□□□□ -0.41
CDH3-206ENST00000567674 LARGE1O95461 756 aa12.51□□□□□ -0.41
CDH3-206ENST00000567674 LAG3P18627 525 aa12.51□□□□□ -0.41
CDH3-206ENST00000567674 U2AF2P26368 475 aaKnown RBP eCLIP12.51□□□□□ -0.41
CDH3-206ENST00000567674 YWHABP31946 246 aaKnown RBP12.51□□□□□ -0.41
CDH3-206ENST00000567674 CTNNB1P35222 781 aa12.51□□□□□ -0.41
CDH3-206ENST00000567674 PPM1AP35813 382 aa12.51□□□□□ -0.41
CDH3-206ENST00000567674 PLCB3Q01970 1234 aa12.51□□□□□ -0.41
CDH3-206ENST00000567674 PDIA5Q14554 519 aa12.51□□□□□ -0.41
CDH3-206ENST00000567674 IFNLR1Q8IU57 520 aaPredicted RBP12.51□□□□□ -0.41
CDH3-206ENST00000567674 FAM184AQ8NB25 1140 aa12.51□□□□□ -0.41
CDH3-206ENST00000567674 CNNM3Q8NE01 707 aa12.51□□□□□ -0.41
CDH3-206ENST00000567674 GDPD5Q8WTR4 605 aa12.51□□□□□ -0.41
CDH3-206ENST00000567674 NLRP7Q8WX94 980 aa12.51□□□□□ -0.41
CDH3-206ENST00000567674 PSPC1Q8WXF1 523 aaKnown RBP12.51□□□□□ -0.41
CDH3-206ENST00000567674 ZBTB10Q96DT7 871 aa12.51□□□□□ -0.41
CDH3-206ENST00000567674 PABPC5Q96DU9 382 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms