RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 TMEM31Q5JXX7 168 aa10.42□□□□□ -0.74
CDH13-210ENST00000567445 SWSAP1Q6NVH7 229 aa10.42□□□□□ -0.74
CDH13-210ENST00000567445 PDXDC2PQ6P474 469 aa10.42□□□□□ -0.74
CDH13-210ENST00000567445 BLOC1S3Q6QNY0 202 aa10.42□□□□□ -0.74
CDH13-210ENST00000567445 BLOC1S2Q6QNY1 142 aa10.42□□□□□ -0.74
CDH13-210ENST00000567445 KIAA0319LQ8IZA0 1049 aa10.42□□□□□ -0.74
CDH13-210ENST00000567445 REXO1Q8N1G1 1221 aaKnown RBP10.42□□□□□ -0.74
CDH13-210ENST00000567445 FBXL16Q8N461 479 aa10.42□□□□□ -0.74
CDH13-210ENST00000567445 P2RX5Q93086 422 aa10.42□□□□□ -0.74
CDH13-210ENST00000567445 ZNF577Q9BSK1 485 aa10.42□□□□□ -0.74
CDH13-210ENST00000567445 LRFN3Q9BTN0 628 aa10.42□□□□□ -0.74
CDH13-210ENST00000567445 TMX1Q9H3N1 280 aa10.42□□□□□ -0.74
CDH13-210ENST00000567445 TBC1D22BQ9NU19 505 aa10.42□□□□□ -0.74
CDH13-210ENST00000567445 CLDND1Q9NY35 253 aa10.42□□□□□ -0.74
CDH13-210ENST00000567445 FAM50BQ9Y247 325 aa10.42□□□□□ -0.74
CDH13-210ENST00000567445 SNX14Q9Y5W7 946 aa10.42□□□□□ -0.74
CDH13-210ENST00000567445 MRPL42Q9Y6G3 142 aaKnown RBP10.42□□□□□ -0.74
CDH13-210ENST00000567445 ATG2AQ2TAZ0 1938 aa10.41□□□□□ -0.74
CDH13-210ENST00000567445 ZBTB42B2RXF5 422 aa10.41□□□□□ -0.74
CDH13-210ENST00000567445 PI4K2BG5E9Z4 385 aa10.41□□□□□ -0.74
CDH13-210ENST00000567445 ADAMTS3O15072 1205 aa10.41□□□□□ -0.74
CDH13-210ENST00000567445 GPR37L1O60883 481 aa10.41□□□□□ -0.74
CDH13-210ENST00000567445 MMP1P03956 469 aa10.41□□□□□ -0.74
CDH13-210ENST00000567445 ATP4AP20648 1035 aa10.41□□□□□ -0.74
CDH13-210ENST00000567445 SSTR3P32745 418 aaPredicted RBP10.41□□□□□ -0.74
CDH13-210ENST00000567445 AKAP17AQ02040 695 aaKnown RBP10.41□□□□□ -0.74
CDH13-210ENST00000567445 HYAL1Q12794 435 aa10.41□□□□□ -0.74
CDH13-210ENST00000567445 NFX1Q12986 1120 aaKnown RBP10.41□□□□□ -0.74
CDH13-210ENST00000567445 TMEM266Q2M3C6 531 aa10.41□□□□□ -0.74
CDH13-210ENST00000567445 CTC1Q2NKJ3 1217 aa10.41□□□□□ -0.74
CDH13-210ENST00000567445 NAALADL2Q58DX5 795 aa10.41□□□□□ -0.74
CDH13-210ENST00000567445 ZNF746Q6NUN9 644 aaPredicted RBP10.41□□□□□ -0.74
CDH13-210ENST00000567445 SMAP1Q8IYB5 467 aaPredicted RBP10.41□□□□□ -0.74
CDH13-210ENST00000567445 POM121Q96HA1 1249 aa10.41□□□□□ -0.74
CDH13-210ENST00000567445 UIMC1Q96RL1 719 aa10.41□□□□□ -0.74
CDH13-210ENST00000567445 AGXT2Q9BYV1 514 aa10.41□□□□□ -0.74
CDH13-210ENST00000567445 ALG13Q9NP73 1137 aaKnown RBP10.41□□□□□ -0.74
CDH13-210ENST00000567445 LRFN2Q9ULH4 789 aa10.41□□□□□ -0.74
CDH13-210ENST00000567445 PLAGL2Q9UPG8 496 aa10.41□□□□□ -0.74
CDH13-210ENST00000567445 GINS2Q9Y248 185 aa10.41□□□□□ -0.74
CDH13-210ENST00000567445 MAFBQ9Y5Q3 323 aaPredicted RBP10.41□□□□□ -0.74
CDH13-210ENST00000567445 MYH9P35579 1960 aaKnown RBP10.4□□□□□ -0.74
CDH13-210ENST00000567445 EVPLQ92817 2033 aa10.4□□□□□ -0.74
CDH13-210ENST00000567445 RPS6KA5O75582 802 aa10.4□□□□□ -0.74
CDH13-210ENST00000567445 PSAPP07602 524 aa10.4□□□□□ -0.74
CDH13-210ENST00000567445 RPS6KB1P23443 525 aa10.4□□□□□ -0.74
CDH13-210ENST00000567445 PSMA5P28066 241 aa10.4□□□□□ -0.74
CDH13-210ENST00000567445 CIITAP33076 1130 aa10.4□□□□□ -0.74
CDH13-210ENST00000567445 LTBRP36941 435 aa10.4□□□□□ -0.74
CDH13-210ENST00000567445 SARSP49591 514 aaKnown RBP10.4□□□□□ -0.74
CDH13-210ENST00000567445 CAMK1Q14012 370 aa10.4□□□□□ -0.74
CDH13-210ENST00000567445 PAN2Q504Q3 1202 aaKnown RBP10.4□□□□□ -0.74
CDH13-210ENST00000567445 PRR16Q569H4 304 aa10.4□□□□□ -0.74
CDH13-210ENST00000567445 ODR4Q5SWX8 454 aa10.4□□□□□ -0.74
CDH13-210ENST00000567445 CKAP2LQ8IYA6 745 aa10.4□□□□□ -0.74
CDH13-210ENST00000567445 CCDC148Q8NFR7 591 aa10.4□□□□□ -0.74
CDH13-210ENST00000567445 BICD2Q8TD16 824 aa10.4□□□□□ -0.74
CDH13-210ENST00000567445 PHKBQ93100 1093 aa10.4□□□□□ -0.74
CDH13-210ENST00000567445 PRKD2Q9BZL6 878 aa10.4□□□□□ -0.74
CDH13-210ENST00000567445 ERVK-5Q9HDB9 667 aa10.4□□□□□ -0.74
CDH13-210ENST00000567445 C11orf16Q9NQ32 467 aa10.4□□□□□ -0.74
CDH13-210ENST00000567445 PRKAG3Q9UGI9 489 aa10.4□□□□□ -0.74
CDH13-210ENST00000567445 TCEAL9Q9UHQ7 104 aa10.4□□□□□ -0.74
CDH13-210ENST00000567445 NOC2LQ9Y3T9 749 aaKnown RBP10.4□□□□□ -0.74
CDH13-210ENST00000567445 PCDHA10Q9Y5I2 948 aa10.4□□□□□ -0.74
CDH13-210ENST00000567445 DENND3A2RUS2 1198 aa10.39□□□□□ -0.75
CDH13-210ENST00000567445 GPR182O15218 404 aa10.39□□□□□ -0.75
CDH13-210ENST00000567445 MGEA5O60502 916 aa10.39□□□□□ -0.75
CDH13-210ENST00000567445 REC8O95072 547 aa10.39□□□□□ -0.75
CDH13-210ENST00000567445 C22orf31O95567 290 aa10.39□□□□□ -0.75
CDH13-210ENST00000567445 ITGB1P05556 798 aa10.39□□□□□ -0.75
CDH13-210ENST00000567445 IFNAR1P17181 557 aa10.39□□□□□ -0.75
CDH13-210ENST00000567445 PLA2G5P39877 138 aa10.39□□□□□ -0.75
CDH13-210ENST00000567445 RBM25P49756 843 aaKnown RBP10.39□□□□□ -0.75
CDH13-210ENST00000567445 EVCP57679 992 aa10.39□□□□□ -0.75
CDH13-210ENST00000567445 NTRK3Q16288 839 aa10.39□□□□□ -0.75
CDH13-210ENST00000567445 METTL13Q8N6R0 699 aa10.39□□□□□ -0.75
CDH13-210ENST00000567445 KLHL23Q8NBE8 558 aa10.39□□□□□ -0.75
CDH13-210ENST00000567445 SPPL3Q8TCT6 385 aa10.39□□□□□ -0.75
CDH13-210ENST00000567445 RASGRP4Q8TDF6 673 aa10.39□□□□□ -0.75
CDH13-210ENST00000567445 TMEM40Q8WWA1 233 aa10.39□□□□□ -0.75
CDH13-210ENST00000567445 PPP2R3CQ969Q6 453 aa10.39□□□□□ -0.75
CDH13-210ENST00000567445 LENG9Q96B70 501 aa10.39□□□□□ -0.75
CDH13-210ENST00000567445 ADAM2Q99965 735 aa10.39□□□□□ -0.75
CDH13-210ENST00000567445 TMUB1Q9BVT8 246 aa10.39□□□□□ -0.75
CDH13-210ENST00000567445 SLC26A6Q9BXS9 759 aa10.39□□□□□ -0.75
CDH13-210ENST00000567445 RNF26Q9BY78 433 aaPredicted RBP10.39□□□□□ -0.75
CDH13-210ENST00000567445 C1orf112Q9NSG2 853 aa10.39□□□□□ -0.75
CDH13-210ENST00000567445 ST3GAL5Q9UNP4 418 aa10.39□□□□□ -0.75
CDH13-210ENST00000567445 CEP131Q9UPN4 1083 aa10.39□□□□□ -0.75
CDH13-210ENST00000567445 HCN4Q9Y3Q4 1203 aa10.39□□□□□ -0.75
CDH13-210ENST00000567445 SAMM50Q9Y512 469 aa10.39□□□□□ -0.75
CDH13-210ENST00000567445 PCDHB7Q9Y5E2 793 aa10.39□□□□□ -0.75
CDH13-210ENST00000567445 KIAA1671Q9BY89 1806 aa10.39□□□□□ -0.75
CDH13-210ENST00000567445 FAM86C2PA6NEL3 165 aa10.38□□□□□ -0.75
CDH13-210ENST00000567445 PPFIA3O75145 1194 aa10.38□□□□□ -0.75
CDH13-210ENST00000567445 CSPG5O95196 566 aa10.38□□□□□ -0.75
CDH13-210ENST00000567445 ALADP13716 330 aa10.38□□□□□ -0.75
CDH13-210ENST00000567445 IBSPP21815 317 aaPredicted RBP10.38□□□□□ -0.75
CDH13-210ENST00000567445 DNAJB1P25685 340 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms