RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 C8orf34Q49A92 452 aa11.37□□□□□ -0.59
GTF3C1-206ENST00000566779 RPAINQ86UA6 219 aa11.37□□□□□ -0.59
GTF3C1-206ENST00000566779 DIS3L2Q8IYB7 885 aaKnown RBP11.37□□□□□ -0.59
GTF3C1-206ENST00000566779 KIAA0319LQ8IZA0 1049 aa11.37□□□□□ -0.59
GTF3C1-206ENST00000566779 ETNPPLQ8TBG4 499 aa11.37□□□□□ -0.59
GTF3C1-206ENST00000566779 NLRP7Q8WX94 980 aa11.37□□□□□ -0.59
GTF3C1-206ENST00000566779 TOP1MTQ969P6 601 aa11.37□□□□□ -0.59
GTF3C1-206ENST00000566779 NOC2LQ9Y3T9 749 aaKnown RBP11.37□□□□□ -0.59
GTF3C1-206ENST00000566779 ENPP3O14638 875 aa11.36□□□□□ -0.59
GTF3C1-206ENST00000566779 TMOD1P28289 359 aa11.36□□□□□ -0.59
GTF3C1-206ENST00000566779 CLCN1P35523 988 aa11.36□□□□□ -0.59
GTF3C1-206ENST00000566779 GATMP50440 423 aa11.36□□□□□ -0.59
GTF3C1-206ENST00000566779 NLRP11P59045 1033 aaKnown RBP11.36□□□□□ -0.59
GTF3C1-206ENST00000566779 HTRA4P83105 476 aaPredicted RBP11.36□□□□□ -0.59
GTF3C1-206ENST00000566779 CYP4A11Q02928 519 aa11.36□□□□□ -0.59
GTF3C1-206ENST00000566779 TFF2Q03403 129 aa11.36□□□□□ -0.59
GTF3C1-206ENST00000566779 ST3GAL1Q11201 340 aa11.36□□□□□ -0.59
GTF3C1-206ENST00000566779 GPM6BQ13491 265 aa11.36□□□□□ -0.59
GTF3C1-206ENST00000566779 SPOUT1Q5T280 376 aaKnown RBP11.36□□□□□ -0.59
GTF3C1-206ENST00000566779 FAM177A1Q8N128 213 aaPredicted RBP11.36□□□□□ -0.59
GTF3C1-206ENST00000566779 RNF169Q8NCN4 708 aa11.36□□□□□ -0.59
GTF3C1-206ENST00000566779 TMEM40Q8WWA1 233 aa11.36□□□□□ -0.59
GTF3C1-206ENST00000566779 LIMCH1Q9UPQ0 1083 aa11.36□□□□□ -0.59
GTF3C1-206ENST00000566779 CHD7Q9P2D1 2997 aa11.36□□□□□ -0.59
GTF3C1-206ENST00000566779 COL4A6Q14031 1691 aa11.36□□□□□ -0.59
GTF3C1-206ENST00000566779 CYP3A7-CYP3A51PA0A087WV96 503 aa11.35□□□□□ -0.59
GTF3C1-206ENST00000566779 BTBD18B2RXH4 712 aa11.35□□□□□ -0.59
GTF3C1-206ENST00000566779 EML1O00423 815 aa11.35□□□□□ -0.59
GTF3C1-206ENST00000566779 MAGEB2O15479 319 aa11.35□□□□□ -0.59
GTF3C1-206ENST00000566779 MGEA5O60502 916 aa11.35□□□□□ -0.59
GTF3C1-206ENST00000566779 LPXNO60711 386 aa11.35□□□□□ -0.59
GTF3C1-206ENST00000566779 BAG4O95429 457 aaKnown RBP11.35□□□□□ -0.59
GTF3C1-206ENST00000566779 MMP1P03956 469 aa11.35□□□□□ -0.59
GTF3C1-206ENST00000566779 STAG3L1P0CL83 205 aa11.35□□□□□ -0.59
GTF3C1-206ENST00000566779 GCFC2P16383 781 aaKnown RBP11.35□□□□□ -0.59
GTF3C1-206ENST00000566779 FGFR4P22455 802 aa11.35□□□□□ -0.59
GTF3C1-206ENST00000566779 CYP3A7P24462 503 aa11.35□□□□□ -0.59
GTF3C1-206ENST00000566779 SAFBQ15424 915 aaKnown RBP eCLIP11.35□□□□□ -0.59
GTF3C1-206ENST00000566779 CALCRLQ16602 461 aa11.35□□□□□ -0.59
GTF3C1-206ENST00000566779 EPC2Q52LR7 807 aa11.35□□□□□ -0.59
GTF3C1-206ENST00000566779 MOXD1Q6UVY6 613 aa11.35□□□□□ -0.59
GTF3C1-206ENST00000566779 TMEM192Q8IY95 271 aa11.35□□□□□ -0.59
GTF3C1-206ENST00000566779 NME8Q8N427 588 aa11.35□□□□□ -0.59
GTF3C1-206ENST00000566779 FAM184AQ8NB25 1140 aa11.35□□□□□ -0.59
GTF3C1-206ENST00000566779 SP7Q8TDD2 431 aaPredicted RBP11.35□□□□□ -0.59
GTF3C1-206ENST00000566779 C8orf76Q96K31 380 aa11.35□□□□□ -0.59
GTF3C1-206ENST00000566779 CCDC43Q96MW1 224 aaKnown RBP11.35□□□□□ -0.59
GTF3C1-206ENST00000566779 PHOX2BQ99453 314 aa11.35□□□□□ -0.59
GTF3C1-206ENST00000566779 NAP1L4Q99733 375 aaKnown RBP11.35□□□□□ -0.59
GTF3C1-206ENST00000566779 ADAM2Q99965 735 aa11.35□□□□□ -0.59
GTF3C1-206ENST00000566779 FTHL17Q9BXU8 183 aa11.35□□□□□ -0.59
GTF3C1-206ENST00000566779 UPF2Q9HAU5 1272 aaKnown RBP11.35□□□□□ -0.59
GTF3C1-206ENST00000566779 ST3GAL5Q9UNP4 418 aa11.35□□□□□ -0.59
GTF3C1-206ENST00000566779 CSDE1O75534 798 aaKnown RBP11.34□□□□□ -0.59
GTF3C1-206ENST00000566779 KCNQ1P51787 676 aa11.34□□□□□ -0.59
GTF3C1-206ENST00000566779 CRYBB1P53674 252 aaPredicted RBP11.34□□□□□ -0.59
GTF3C1-206ENST00000566779 PSMC5P62195 406 aa11.34□□□□□ -0.59
GTF3C1-206ENST00000566779 DRP2Q13474 957 aa11.34□□□□□ -0.59
GTF3C1-206ENST00000566779 CTTNQ14247 550 aaKnown RBP11.34□□□□□ -0.59
GTF3C1-206ENST00000566779 XKR3Q5GH77 459 aa11.34□□□□□ -0.59
GTF3C1-206ENST00000566779 TJAP1Q5JTD0 557 aa11.34□□□□□ -0.59
GTF3C1-206ENST00000566779 POTEHQ6S545 545 aa11.34□□□□□ -0.59
GTF3C1-206ENST00000566779 FAM228AQ86W67 206 aa11.34□□□□□ -0.59
GTF3C1-206ENST00000566779 NPAS4Q8IUM7 802 aa11.34□□□□□ -0.59
GTF3C1-206ENST00000566779 RDM1Q8NG50 284 aa11.34□□□□□ -0.59
GTF3C1-206ENST00000566779 NLRP4Q96MN2 994 aa11.34□□□□□ -0.59
GTF3C1-206ENST00000566779 MBOAT7Q96N66 472 aa11.34□□□□□ -0.59
GTF3C1-206ENST00000566779 LXNQ9BS40 222 aa11.34□□□□□ -0.59
GTF3C1-206ENST00000566779 TMX1Q9H3N1 280 aa11.34□□□□□ -0.59
GTF3C1-206ENST00000566779 ERVK-5Q9HDB9 667 aa11.34□□□□□ -0.59
GTF3C1-206ENST00000566779 VAV3Q9UKW4 847 aa11.34□□□□□ -0.59
GTF3C1-206ENST00000566779 MRPL42Q9Y6G3 142 aaKnown RBP11.34□□□□□ -0.59
GTF3C1-206ENST00000566779 KDM3AQ9Y4C1 1321 aa11.34□□□□□ -0.59
GTF3C1-206ENST00000566779 EYSQ5T1H1 3165 aa11.33□□□□□ -0.6
GTF3C1-206ENST00000566779 TBKBP1A7MCY6 615 aa11.33□□□□□ -0.6
GTF3C1-206ENST00000566779 GPR182O15218 404 aa11.33□□□□□ -0.6
GTF3C1-206ENST00000566779 NEMFO60524 1076 aa11.33□□□□□ -0.6
GTF3C1-206ENST00000566779 MCM7P33993 719 aa11.33□□□□□ -0.6
GTF3C1-206ENST00000566779 TXKP42681 527 aa11.33□□□□□ -0.6
GTF3C1-206ENST00000566779 QARSP47897 775 aaKnown RBP11.33□□□□□ -0.6
GTF3C1-206ENST00000566779 DNM2P50570 870 aa11.33□□□□□ -0.6
GTF3C1-206ENST00000566779 POLGP54098 1239 aaPredicted RBP11.33□□□□□ -0.6
GTF3C1-206ENST00000566779 NPEPPSP55786 919 aa11.33□□□□□ -0.6
GTF3C1-206ENST00000566779 MRPS5P82675 430 aaKnown RBP11.33□□□□□ -0.6
GTF3C1-206ENST00000566779 PTPROQ16827 1216 aa11.33□□□□□ -0.6
GTF3C1-206ENST00000566779 ODR4Q5SWX8 454 aa11.33□□□□□ -0.6
GTF3C1-206ENST00000566779 PPP4R3AQ6IN85 833 aa11.33□□□□□ -0.6
GTF3C1-206ENST00000566779 RTN4RL1Q86UN2 441 aaPredicted RBP11.33□□□□□ -0.6
GTF3C1-206ENST00000566779 RHPN2Q8IUC4 686 aa11.33□□□□□ -0.6
GTF3C1-206ENST00000566779 ADAMTS19Q8TE59 1207 aa11.33□□□□□ -0.6
GTF3C1-206ENST00000566779 DYDC2Q96IM9 177 aa11.33□□□□□ -0.6
GTF3C1-206ENST00000566779 CEP170P1Q96L14 293 aa11.33□□□□□ -0.6
GTF3C1-206ENST00000566779 FAM20AQ96MK3 541 aa11.33□□□□□ -0.6
GTF3C1-206ENST00000566779 KCNMB3Q9NPA1 279 aa11.33□□□□□ -0.6
GTF3C1-206ENST00000566779 RGL1Q9NZL6 768 aa11.33□□□□□ -0.6
GTF3C1-206ENST00000566779 PCDHB7Q9Y5E2 793 aa11.33□□□□□ -0.6
GTF3C1-206ENST00000566779 TDRD15B5MCY1 1934 aaKnown RBP11.33□□□□□ -0.6
GTF3C1-206ENST00000566779 MYH11P35749 1972 aa11.32□□□□□ -0.6
GTF3C1-206ENST00000566779 TRANK1O15050 2925 aa11.32□□□□□ -0.6
GTF3C1-206ENST00000566779 WNT7AO00755 349 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms