RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 CLTBP09497 229 aa12.76□□□□□ -0.37
KARS-207ENST00000566560 PLA2G4BP0C869 781 aa12.76□□□□□ -0.37
KARS-207ENST00000566560 KLRC1P26715 233 aa12.76□□□□□ -0.37
KARS-207ENST00000566560 CLCN3P51790 818 aa12.76□□□□□ -0.37
KARS-207ENST00000566560 NDUFA8P51970 172 aa12.76□□□□□ -0.37
KARS-207ENST00000566560 NAALADL2Q58DX5 795 aa12.76□□□□□ -0.37
KARS-207ENST00000566560 TAF2Q6P1X5 1199 aa12.76□□□□□ -0.37
KARS-207ENST00000566560 PADI6Q6TGC4 694 aa12.76□□□□□ -0.37
KARS-207ENST00000566560 RUFY4Q6ZNE9 571 aa12.76□□□□□ -0.37
KARS-207ENST00000566560 SERINC5Q86VE9 423 aa12.76□□□□□ -0.37
KARS-207ENST00000566560 GPIHBP1Q8IV16 184 aa12.76□□□□□ -0.37
KARS-207ENST00000566560 METTL13Q8N6R0 699 aa12.76□□□□□ -0.37
KARS-207ENST00000566560 RETREG2Q8NC44 543 aa12.76□□□□□ -0.37
KARS-207ENST00000566560 ZDHHC16Q969W1 377 aa12.76□□□□□ -0.37
KARS-207ENST00000566560 TOX2Q96NM4 488 aa12.76□□□□□ -0.37
KARS-207ENST00000566560 CTAGE1Q96RT6 745 aa12.76□□□□□ -0.37
KARS-207ENST00000566560 CEP89Q96ST8 783 aa12.76□□□□□ -0.37
KARS-207ENST00000566560 MTRQ99707 1265 aa12.76□□□□□ -0.37
KARS-207ENST00000566560 JPH2Q9BR39 696 aaPredicted RBP12.76□□□□□ -0.37
KARS-207ENST00000566560 PANK2Q9BZ23 570 aa12.76□□□□□ -0.37
KARS-207ENST00000566560 FAM49AQ9H0Q0 323 aaPredicted RBP12.76□□□□□ -0.37
KARS-207ENST00000566560 HPSEQ9Y251 543 aa12.76□□□□□ -0.37
KARS-207ENST00000566560 LTBP2Q14767 1821 aa12.76□□□□□ -0.37
KARS-207ENST00000566560 FAM237AA0A1B0GTK4 181 aa12.75□□□□□ -0.37
KARS-207ENST00000566560 SMIM35A0A1B0GVV1 85 aa12.75□□□□□ -0.37
KARS-207ENST00000566560 GADD45BO75293 160 aaPredicted RBP12.75□□□□□ -0.37
KARS-207ENST00000566560 PRPF40AO75400 957 aaKnown RBP12.75□□□□□ -0.37
KARS-207ENST00000566560 MAFO75444 373 aaPredicted RBP12.75□□□□□ -0.37
KARS-207ENST00000566560 SYKP43405 635 aa12.75□□□□□ -0.37
KARS-207ENST00000566560 SLC12A3P55017 1021 aa12.75□□□□□ -0.37
KARS-207ENST00000566560 UBE2HP62256 183 aa12.75□□□□□ -0.37
KARS-207ENST00000566560 PTK7Q13308 1070 aa12.75□□□□□ -0.37
KARS-207ENST00000566560 DHX8Q14562 1220 aaKnown RBP12.75□□□□□ -0.37
KARS-207ENST00000566560 MCM6Q14566 821 aa12.75□□□□□ -0.37
KARS-207ENST00000566560 GPBP1Q86WP2 473 aa12.75□□□□□ -0.37
KARS-207ENST00000566560 EXOC8Q8IYI6 725 aa12.75□□□□□ -0.37
KARS-207ENST00000566560 C7orf61Q8IZ16 206 aa12.75□□□□□ -0.37
KARS-207ENST00000566560 LRRC71Q8N4P6 559 aa12.75□□□□□ -0.37
KARS-207ENST00000566560 CCDC155Q8N6L0 562 aa12.75□□□□□ -0.37
KARS-207ENST00000566560 IQUBQ8NA54 791 aa12.75□□□□□ -0.37
KARS-207ENST00000566560 WNT8BQ93098 351 aa12.75□□□□□ -0.37
KARS-207ENST00000566560 MAP7D2Q96T17 732 aa12.75□□□□□ -0.37
KARS-207ENST00000566560 RUSC1Q9BVN2 902 aa12.75□□□□□ -0.37
KARS-207ENST00000566560 CUEDC2Q9H467 287 aa12.75□□□□□ -0.37
KARS-207ENST00000566560 DHX33Q9H6R0 707 aaKnown RBP12.75□□□□□ -0.37
KARS-207ENST00000566560 SUGCTQ9HAC7 445 aa12.75□□□□□ -0.37
KARS-207ENST00000566560 MAGEF1Q9HAY2 307 aa12.75□□□□□ -0.37
KARS-207ENST00000566560 XPNPEP1Q9NQW7 623 aa12.75□□□□□ -0.37
KARS-207ENST00000566560 PRDM5Q9NQX1 630 aaPredicted RBP12.75□□□□□ -0.37
KARS-207ENST00000566560 PDLIM7Q9NR12 457 aa12.75□□□□□ -0.37
KARS-207ENST00000566560 PCDHA2Q9Y5H9 948 aa12.75□□□□□ -0.37
KARS-207ENST00000566560 GAS2O43903 313 aaKnown RBP12.74□□□□□ -0.37
KARS-207ENST00000566560 RPLP2P05387 115 aaKnown RBP12.74□□□□□ -0.37
KARS-207ENST00000566560 TMOD1P28289 359 aa12.74□□□□□ -0.37
KARS-207ENST00000566560 FAAP100Q0VG06 881 aa12.74□□□□□ -0.37
KARS-207ENST00000566560 EFCAB12Q6NXP0 572 aa12.74□□□□□ -0.37
KARS-207ENST00000566560 RSPH3Q86UC2 560 aa12.74□□□□□ -0.37
KARS-207ENST00000566560 CEP57L1Q8IYX8 460 aa12.74□□□□□ -0.37
KARS-207ENST00000566560 LINC01465Q8N7H1 131 aa12.74□□□□□ -0.37
KARS-207ENST00000566560 SYT2Q8N9I0 419 aaPredicted RBP12.74□□□□□ -0.37
KARS-207ENST00000566560 MCPH1Q8NEM0 835 aa12.74□□□□□ -0.37
KARS-207ENST00000566560 CAGE1Q8TC20 777 aa12.74□□□□□ -0.37
KARS-207ENST00000566560 DNAJB3Q8WWF6 145 aa12.74□□□□□ -0.37
KARS-207ENST00000566560 DHX38Q92620 1227 aaKnown RBP12.74□□□□□ -0.37
KARS-207ENST00000566560 TNMDQ9H2S6 317 aa12.74□□□□□ -0.37
KARS-207ENST00000566560 KCND2Q9NZV8 630 aa12.74□□□□□ -0.37
KARS-207ENST00000566560 TBX21Q9UL17 535 aa12.74□□□□□ -0.37
KARS-207ENST00000566560 AKT3Q9Y243 479 aa12.74□□□□□ -0.37
KARS-207ENST00000566560 IGKV6-21A0A0C4DH24 114 aa12.73□□□□□ -0.37
KARS-207ENST00000566560 ACTN4O43707 911 aaKnown RBP12.73□□□□□ -0.37
KARS-207ENST00000566560 CAND2O75155 1236 aa12.73□□□□□ -0.37
KARS-207ENST00000566560 KRT18P05783 430 aaKnown RBP12.73□□□□□ -0.37
KARS-207ENST00000566560 CTSHP09668 335 aa12.73□□□□□ -0.37
KARS-207ENST00000566560 CYP11B2P19099 503 aa12.73□□□□□ -0.37
KARS-207ENST00000566560 THPOP40225 353 aa12.73□□□□□ -0.37
KARS-207ENST00000566560 FAM160A1Q05DH4 1040 aa12.73□□□□□ -0.37
KARS-207ENST00000566560 DRP2Q13474 957 aa12.73□□□□□ -0.37
KARS-207ENST00000566560 RINT1Q6NUQ1 792 aa12.73□□□□□ -0.37
KARS-207ENST00000566560 SV2BQ7L1I2 683 aa12.73□□□□□ -0.37
KARS-207ENST00000566560 MAEAQ7L5Y9 396 aa12.73□□□□□ -0.37
KARS-207ENST00000566560 TCP11Q8WWU5 503 aa12.73□□□□□ -0.37
KARS-207ENST00000566560 PSPC1Q8WXF1 523 aaKnown RBP12.73□□□□□ -0.37
KARS-207ENST00000566560 TMEM143Q96AN5 459 aa12.73□□□□□ -0.37
KARS-207ENST00000566560 NOC4LQ9BVI4 516 aaKnown RBP12.73□□□□□ -0.37
KARS-207ENST00000566560 PPP1R12CQ9BZL4 782 aa12.73□□□□□ -0.37
KARS-207ENST00000566560 POLR3FQ9H1D9 316 aaPredicted RBP12.73□□□□□ -0.37
KARS-207ENST00000566560 HIPK3Q9H422 1215 aa12.73□□□□□ -0.37
KARS-207ENST00000566560 GPRC5CQ9NQ84 441 aa12.73□□□□□ -0.37
KARS-207ENST00000566560 TMEM39AQ9NV64 488 aa12.73□□□□□ -0.37
KARS-207ENST00000566560 USP25Q9UHP3 1055 aa12.73□□□□□ -0.37
KARS-207ENST00000566560 M0QZ92 97 aa12.72□□□□□ -0.37
KARS-207ENST00000566560 MAP3K7O43318 606 aa12.72□□□□□ -0.37
KARS-207ENST00000566560 TBCAO75347 108 aaKnown RBP12.72□□□□□ -0.37
KARS-207ENST00000566560 VTNP04004 478 aa12.72□□□□□ -0.37
KARS-207ENST00000566560 LIG1P18858 919 aa12.72□□□□□ -0.37
KARS-207ENST00000566560 GUCY2CP25092 1073 aa12.72□□□□□ -0.37
KARS-207ENST00000566560 DNM2P50570 870 aa12.72□□□□□ -0.37
KARS-207ENST00000566560 EMP3P54852 163 aa12.72□□□□□ -0.37
KARS-207ENST00000566560 MRPS6P82932 125 aaKnown RBP12.72□□□□□ -0.37
KARS-207ENST00000566560 RBL2Q08999 1139 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms