RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 CTNND1O60716 968 aaKnown RBP20.43■□□□□ 0.86
MSLN-207ENST00000566549 ATP9AO75110 1047 aa20.43■□□□□ 0.86
MSLN-207ENST00000566549 PHACTR2O75167 634 aa20.43■□□□□ 0.86
MSLN-207ENST00000566549 PAFAH1B1P43034 410 aa20.43■□□□□ 0.86
MSLN-207ENST00000566549 JAM2P57087 298 aa20.43■□□□□ 0.86
MSLN-207ENST00000566549 PGM5Q15124 567 aa20.43■□□□□ 0.86
MSLN-207ENST00000566549 ALKBH5Q6P6C2 394 aaKnown RBP20.43■□□□□ 0.86
MSLN-207ENST00000566549 TRERF1Q96PN7 1200 aa20.43■□□□□ 0.86
MSLN-207ENST00000566549 RMDN3Q96TC7 470 aa20.43■□□□□ 0.86
MSLN-207ENST00000566549 DMGDHQ9UI17 866 aaKnown RBP20.43■□□□□ 0.86
MSLN-207ENST00000566549 NAGPAQ9UK23 515 aa20.43■□□□□ 0.86
MSLN-207ENST00000566549 MYH10P35580 1976 aa20.42■□□□□ 0.86
MSLN-207ENST00000566549 GRID2IPA4D2P6 1211 aa20.42■□□□□ 0.86
MSLN-207ENST00000566549 EIF3JO75822 258 aaKnown RBP20.42■□□□□ 0.86
MSLN-207ENST00000566549 NOP2P46087 812 aaKnown RBP20.42■□□□□ 0.86
MSLN-207ENST00000566549 ZNF280AP59817 542 aaPredicted RBP20.42■□□□□ 0.86
MSLN-207ENST00000566549 GPRC5CQ9NQ84 441 aa20.42■□□□□ 0.86
MSLN-207ENST00000566549 RBM12Q9NTZ6 932 aaKnown RBP20.42■□□□□ 0.86
MSLN-207ENST00000566549 QARSP47897 775 aaKnown RBP20.42■□□□□ 0.86
MSLN-207ENST00000566549 RARRES1P49788 294 aa20.42■□□□□ 0.86
MSLN-207ENST00000566549 TGFB2P61812 414 aa20.42■□□□□ 0.86
MSLN-207ENST00000566549 GPS2Q13227 327 aa20.42■□□□□ 0.86
MSLN-207ENST00000566549 CCDC70Q6NSX1 233 aa20.42■□□□□ 0.86
MSLN-207ENST00000566549 TCEAL9Q9UHQ7 104 aa20.42■□□□□ 0.86
MSLN-207ENST00000566549 RIPK3Q9Y572 518 aa20.42■□□□□ 0.86
MSLN-207ENST00000566549 MCM3P25205 808 aa20.41■□□□□ 0.86
MSLN-207ENST00000566549 MMGT1Q8N4V1 131 aa20.41■□□□□ 0.86
MSLN-207ENST00000566549 NEK9Q8TD19 979 aa20.41■□□□□ 0.86
MSLN-207ENST00000566549 DMAC2Q9NW81 257 aa20.41■□□□□ 0.86
MSLN-207ENST00000566549 VPS18Q9P253 973 aa20.41■□□□□ 0.86
MSLN-207ENST00000566549 CNOT7Q9UIV1 285 aaKnown RBP20.41■□□□□ 0.86
MSLN-207ENST00000566549 PCDHGC5Q9Y5F6 944 aa20.41■□□□□ 0.86
MSLN-207ENST00000566549 BZW2Q9Y6E2 419 aaKnown RBP20.41■□□□□ 0.86
MSLN-207ENST00000566549 YWHABP31946 246 aaKnown RBP20.41■□□□□ 0.86
MSLN-207ENST00000566549 MAP9Q49MG5 647 aa20.41■□□□□ 0.86
MSLN-207ENST00000566549 PLA2G4FQ68DD2 849 aa20.41■□□□□ 0.86
MSLN-207ENST00000566549 RNF207Q6ZRF8 634 aa20.41■□□□□ 0.86
MSLN-207ENST00000566549 MKNK1Q9BUB5 465 aa20.41■□□□□ 0.86
MSLN-207ENST00000566549 LARSQ9P2J5 1176 aaKnown RBP20.41■□□□□ 0.86
MSLN-207ENST00000566549 DNAJC12Q9UKB3 198 aa20.41■□□□□ 0.86
MSLN-207ENST00000566549 UBE4BO95155 1302 aa20.4■□□□□ 0.86
MSLN-207ENST00000566549 GTPBP10A4D1E9 387 aaKnown RBP20.4■□□□□ 0.86
MSLN-207ENST00000566549 TMCO5BA8MYB1 307 aa20.4■□□□□ 0.86
MSLN-207ENST00000566549 BACH1O14867 736 aa20.4■□□□□ 0.86
MSLN-207ENST00000566549 EVI5O60447 810 aa20.4■□□□□ 0.86
MSLN-207ENST00000566549 ZBED4O75132 1171 aa20.4■□□□□ 0.86
MSLN-207ENST00000566549 DLG4P78352 724 aa20.4■□□□□ 0.86
MSLN-207ENST00000566549 NFIL3Q16649 462 aa20.4■□□□□ 0.86
MSLN-207ENST00000566549 ARHGEF16Q5VV41 709 aa20.4■□□□□ 0.86
MSLN-207ENST00000566549 CCNI2Q6ZMN8 369 aaPredicted RBP20.4■□□□□ 0.86
MSLN-207ENST00000566549 ZSWIM2Q8NEG5 633 aa20.4■□□□□ 0.86
MSLN-207ENST00000566549 U2AF1L4Q8WU68 220 aaKnown RBP20.4■□□□□ 0.86
MSLN-207ENST00000566549 CBWD1Q9BRT8 395 aa20.4■□□□□ 0.86
MSLN-207ENST00000566549 A0A0U1RQG5 324 aaPredicted RBP20.39■□□□□ 0.86
MSLN-207ENST00000566549 PPP1R37O75864 691 aa20.39■□□□□ 0.86
MSLN-207ENST00000566549 PRKCIP41743 596 aa20.39■□□□□ 0.86
MSLN-207ENST00000566549 NPEPPSP55786 919 aa20.39■□□□□ 0.86
MSLN-207ENST00000566549 BFSP1Q12934 665 aa20.39■□□□□ 0.86
MSLN-207ENST00000566549 ARHGAP44Q17R89 818 aa20.39■□□□□ 0.86
MSLN-207ENST00000566549 CFAP221Q4G0U5 840 aa20.39■□□□□ 0.86
MSLN-207ENST00000566549 MEI1Q5TIA1 1274 aa20.39■□□□□ 0.86
MSLN-207ENST00000566549 PDCD2LQ9BRP1 358 aa20.39■□□□□ 0.86
MSLN-207ENST00000566549 INTS2Q9H0H0 1204 aaKnown RBP20.39■□□□□ 0.86
MSLN-207ENST00000566549 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.39■□□□□ 0.86
MSLN-207ENST00000566549 F8VZ95 297 aa20.39■□□□□ 0.85
MSLN-207ENST00000566549 VWA5AO00534 786 aa20.39■□□□□ 0.85
MSLN-207ENST00000566549 DDX3XO00571 662 aaKnown RBP eCLIP20.39■□□□□ 0.85
MSLN-207ENST00000566549 STAT1P42224 750 aa20.39■□□□□ 0.85
MSLN-207ENST00000566549 MYL7Q01449 175 aa20.39■□□□□ 0.85
MSLN-207ENST00000566549 DRAP1Q14919 205 aaPredicted RBP20.39■□□□□ 0.85
MSLN-207ENST00000566549 NIPA1Q7RTP0 329 aa20.39■□□□□ 0.85
MSLN-207ENST00000566549 ZNF572Q7Z3I7 529 aaPredicted RBP20.39■□□□□ 0.85
MSLN-207ENST00000566549 STRA6Q9BX79 667 aa20.39■□□□□ 0.85
MSLN-207ENST00000566549 PXMP2Q9NR77 195 aa20.39■□□□□ 0.85
MSLN-207ENST00000566549 TSKSQ9UJT2 592 aa20.39■□□□□ 0.85
MSLN-207ENST00000566549 FBXL5Q9UKA1 691 aa20.39■□□□□ 0.85
MSLN-207ENST00000566549 FAN1Q9Y2M0 1017 aa20.39■□□□□ 0.85
MSLN-207ENST00000566549 SORBS3O60504 671 aa20.38■□□□□ 0.85
MSLN-207ENST00000566549 LRRN2O75325 713 aa20.38■□□□□ 0.85
MSLN-207ENST00000566549 CCNE2O96020 404 aa20.38■□□□□ 0.85
MSLN-207ENST00000566549 BAATQ14032 418 aaPredicted RBP20.38■□□□□ 0.85
MSLN-207ENST00000566549 VPS36Q86VN1 386 aa20.38■□□□□ 0.85
MSLN-207ENST00000566549 GLYCTKQ8IVS8 523 aa20.38■□□□□ 0.85
MSLN-207ENST00000566549 WRNIP1Q96S55 665 aa20.38■□□□□ 0.85
MSLN-207ENST00000566549 SELENOOQ9BVL4 669 aa20.38■□□□□ 0.85
MSLN-207ENST00000566549 RNF146Q9NTX7 359 aa20.38■□□□□ 0.85
MSLN-207ENST00000566549 SLC16A4O15374 487 aa20.38■□□□□ 0.85
MSLN-207ENST00000566549 PEX3P56589 373 aa20.38■□□□□ 0.85
MSLN-207ENST00000566549 TBC1D22BQ9NU19 505 aa20.38■□□□□ 0.85
MSLN-207ENST00000566549 PLS3P13797 630 aa20.37■□□□□ 0.85
MSLN-207ENST00000566549 SOX5P35711 763 aa20.37■□□□□ 0.85
MSLN-207ENST00000566549 HMGCS2P54868 508 aa20.37■□□□□ 0.85
MSLN-207ENST00000566549 SP4Q02446 784 aa20.37■□□□□ 0.85
MSLN-207ENST00000566549 HSP90B2PQ58FF3 399 aa20.37■□□□□ 0.85
MSLN-207ENST00000566549 FAM102BQ5T8I3 360 aa20.37■□□□□ 0.85
MSLN-207ENST00000566549 C8orf74Q6P047 294 aa20.37■□□□□ 0.85
MSLN-207ENST00000566549 GOLGA5Q8TBA6 731 aa20.37■□□□□ 0.85
MSLN-207ENST00000566549 LNX1Q8TBB1 728 aaPredicted RBP20.37■□□□□ 0.85
MSLN-207ENST00000566549 KIFC3Q9BVG8 833 aa20.37■□□□□ 0.85
MSLN-207ENST00000566549 SEPT11Q9NVA2 429 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms