RNA–Protein interactions for RNA: ENST00000566482.5

CNEP1R1-208, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-208ENST00000566482 RTN4RL1Q86UN2 441 aaPredicted RBP14.38□□□□□ -0.11
CNEP1R1-208ENST00000566482 EXOC8Q8IYI6 725 aa14.38□□□□□ -0.11
CNEP1R1-208ENST00000566482 IGSF22Q8N9C0 903 aa14.38□□□□□ -0.11
CNEP1R1-208ENST00000566482 NLRP7Q8WX94 980 aa14.38□□□□□ -0.11
CNEP1R1-208ENST00000566482 TOP1MTQ969P6 601 aa14.38□□□□□ -0.11
CNEP1R1-208ENST00000566482 TMEM143Q96AN5 459 aa14.38□□□□□ -0.11
CNEP1R1-208ENST00000566482 CCDC43Q96MW1 224 aaKnown RBP14.38□□□□□ -0.11
CNEP1R1-208ENST00000566482 CDX2Q99626 313 aaPredicted RBP14.38□□□□□ -0.11
CNEP1R1-208ENST00000566482 FTHL17Q9BXU8 183 aa14.38□□□□□ -0.11
CNEP1R1-208ENST00000566482 LRWD1Q9UFC0 647 aa14.38□□□□□ -0.11
CNEP1R1-208ENST00000566482 ST3GAL5Q9UNP4 418 aa14.38□□□□□ -0.11
CNEP1R1-208ENST00000566482 GPR182O15218 404 aa14.37□□□□□ -0.11
CNEP1R1-208ENST00000566482 GAS2O43903 313 aaKnown RBP14.37□□□□□ -0.11
CNEP1R1-208ENST00000566482 DARSP14868 501 aaKnown RBP14.37□□□□□ -0.11
CNEP1R1-208ENST00000566482 EIF4BP23588 611 aaKnown RBP14.37□□□□□ -0.11
CNEP1R1-208ENST00000566482 CCT6AP40227 531 aaKnown RBP14.37□□□□□ -0.11
CNEP1R1-208ENST00000566482 RARRES1P49788 294 aa14.37□□□□□ -0.11
CNEP1R1-208ENST00000566482 HTRA4P83105 476 aaPredicted RBP14.37□□□□□ -0.11
CNEP1R1-208ENST00000566482 TAP1Q03518 808 aa14.37□□□□□ -0.11
CNEP1R1-208ENST00000566482 RESTQ13127 1097 aa14.37□□□□□ -0.11
CNEP1R1-208ENST00000566482 PDIA5Q14554 519 aa14.37□□□□□ -0.11
CNEP1R1-208ENST00000566482 HAUS3Q68CZ6 603 aa14.37□□□□□ -0.11
CNEP1R1-208ENST00000566482 DTHD1Q6ZMT9 781 aa14.37□□□□□ -0.11
CNEP1R1-208ENST00000566482 RHPN2Q8IUC4 686 aa14.37□□□□□ -0.11
CNEP1R1-208ENST00000566482 KSR1Q8IVT5 923 aa14.37□□□□□ -0.11
CNEP1R1-208ENST00000566482 MYLIPQ8WY64 445 aa14.37□□□□□ -0.11
CNEP1R1-208ENST00000566482 MTRQ99707 1265 aa14.37□□□□□ -0.11
CNEP1R1-208ENST00000566482 RAB34Q9BZG1 259 aa14.37□□□□□ -0.11
CNEP1R1-208ENST00000566482 TSPYL2Q9H2G4 693 aaPredicted RBP14.37□□□□□ -0.11
CNEP1R1-208ENST00000566482 XPNPEP1Q9NQW7 623 aa14.37□□□□□ -0.11
CNEP1R1-208ENST00000566482 MTMR6Q9Y217 621 aa14.37□□□□□ -0.11
CNEP1R1-208ENST00000566482 INSL6Q9Y581 213 aa14.37□□□□□ -0.11
CNEP1R1-208ENST00000566482 A0A087WZ62 844 aa14.36□□□□□ -0.11
CNEP1R1-208ENST00000566482 PP2D1A8MPX8 630 aa14.36□□□□□ -0.11
CNEP1R1-208ENST00000566482 CSDE1O75534 798 aaKnown RBP14.36□□□□□ -0.11
CNEP1R1-208ENST00000566482 XRCC6P12956 609 aaKnown RBP eCLIP14.36□□□□□ -0.11
CNEP1R1-208ENST00000566482 MUTP22033 750 aa14.36□□□□□ -0.11
CNEP1R1-208ENST00000566482 FGFR4P22455 802 aa14.36□□□□□ -0.11
CNEP1R1-208ENST00000566482 CDC42EP1Q00587 391 aa14.36□□□□□ -0.11
CNEP1R1-208ENST00000566482 ECM1Q16610 540 aa14.36□□□□□ -0.11
CNEP1R1-208ENST00000566482 ZNF410Q86VK4 478 aa14.36□□□□□ -0.11
CNEP1R1-208ENST00000566482 SNX29Q8TEQ0 813 aa14.36□□□□□ -0.11
CNEP1R1-208ENST00000566482 TCP11Q8WWU5 503 aa14.36□□□□□ -0.11
CNEP1R1-208ENST00000566482 PRPF31Q8WWY3 499 aaKnown RBP14.36□□□□□ -0.11
CNEP1R1-208ENST00000566482 PSPC1Q8WXF1 523 aaKnown RBP14.36□□□□□ -0.11
CNEP1R1-208ENST00000566482 NLRP4Q96MN2 994 aa14.36□□□□□ -0.11
CNEP1R1-208ENST00000566482 NACC1Q96RE7 527 aa14.36□□□□□ -0.11
CNEP1R1-208ENST00000566482 YME1L1Q96TA2 773 aa14.36□□□□□ -0.11
CNEP1R1-208ENST00000566482 ADAM2Q99965 735 aa14.36□□□□□ -0.11
CNEP1R1-208ENST00000566482 FDXACB1Q9BRP7 624 aaPredicted RBP14.36□□□□□ -0.11
CNEP1R1-208ENST00000566482 GCOM2Q9BZD3 368 aaPredicted RBP14.36□□□□□ -0.11
CNEP1R1-208ENST00000566482 PRDM12Q9H4Q4 367 aa14.36□□□□□ -0.11
CNEP1R1-208ENST00000566482 ATP6V0A4Q9HBG4 840 aa14.36□□□□□ -0.11
CNEP1R1-208ENST00000566482 DBR1Q9UK59 544 aaKnown RBP14.36□□□□□ -0.11
CNEP1R1-208ENST00000566482 COL4A3BPQ9Y5P4 624 aa14.36□□□□□ -0.11
CNEP1R1-208ENST00000566482 CHD7Q9P2D1 2997 aa14.36□□□□□ -0.11
CNEP1R1-208ENST00000566482 DENND3A2RUS2 1198 aa14.35□□□□□ -0.11
CNEP1R1-208ENST00000566482 STX6O43752 255 aa14.35□□□□□ -0.11
CNEP1R1-208ENST00000566482 USO1O60763 962 aaKnown RBP14.35□□□□□ -0.11
CNEP1R1-208ENST00000566482 DGAT1O75907 488 aa14.35□□□□□ -0.11
CNEP1R1-208ENST00000566482 HSP90AA1P07900 732 aaKnown RBP14.35□□□□□ -0.11
CNEP1R1-208ENST00000566482 CDC25AP30304 524 aa14.35□□□□□ -0.11
CNEP1R1-208ENST00000566482 LAMTOR4Q0VGL1 99 aa14.35□□□□□ -0.11
CNEP1R1-208ENST00000566482 DSC3Q14574 896 aa14.35□□□□□ -0.11
CNEP1R1-208ENST00000566482 ARL6IP4Q66PJ3 421 aaKnown RBP14.35□□□□□ -0.11
CNEP1R1-208ENST00000566482 SPRED2Q7Z698 418 aa14.35□□□□□ -0.11
CNEP1R1-208ENST00000566482 CERS4Q9HA82 394 aa14.35□□□□□ -0.11
CNEP1R1-208ENST00000566482 STXBP5LQ9Y2K9 1186 aa14.35□□□□□ -0.11
CNEP1R1-208ENST00000566482 STK24Q9Y6E0 443 aa14.35□□□□□ -0.11
CNEP1R1-208ENST00000566482 LINC01553A4QN01 128 aa14.34□□□□□ -0.11
CNEP1R1-208ENST00000566482 ARHGEF35A5YM69 484 aa14.34□□□□□ -0.11
CNEP1R1-208ENST00000566482 VWA3AA6NCI4 1184 aa14.34□□□□□ -0.11
CNEP1R1-208ENST00000566482 BMP15O95972 392 aa14.34□□□□□ -0.11
CNEP1R1-208ENST00000566482 IBSPP21815 317 aaPredicted RBP14.34□□□□□ -0.11
CNEP1R1-208ENST00000566482 SARSP49591 514 aaKnown RBP14.34□□□□□ -0.11
CNEP1R1-208ENST00000566482 SF3A1Q15459 793 aaKnown RBP14.34□□□□□ -0.11
CNEP1R1-208ENST00000566482 KRT79Q5XKE5 535 aa14.34□□□□□ -0.11
CNEP1R1-208ENST00000566482 FAM173BQ6P4H8 233 aa14.34□□□□□ -0.11
CNEP1R1-208ENST00000566482 FAM43BQ6ZT52 329 aaPredicted RBP14.34□□□□□ -0.11
CNEP1R1-208ENST00000566482 NPAS4Q8IUM7 802 aa14.34□□□□□ -0.11
CNEP1R1-208ENST00000566482 SP7Q8TDD2 431 aaPredicted RBP14.34□□□□□ -0.11
CNEP1R1-208ENST00000566482 MMTAG2Q9BU76 263 aaKnown RBP14.34□□□□□ -0.11
CNEP1R1-208ENST00000566482 IFT122Q9HBG6 1241 aa14.34□□□□□ -0.11
CNEP1R1-208ENST00000566482 RGS18Q9NS28 235 aa14.34□□□□□ -0.11
CNEP1R1-208ENST00000566482 C1orf112Q9NSG2 853 aa14.34□□□□□ -0.11
CNEP1R1-208ENST00000566482 DDX19AQ9NUU7 478 aaKnown RBP14.34□□□□□ -0.11
CNEP1R1-208ENST00000566482 KIAA1024Q9UPX6 916 aa14.34□□□□□ -0.11
CNEP1R1-208ENST00000566482 CLIC4Q9Y696 253 aa14.34□□□□□ -0.11
CNEP1R1-208ENST00000566482 TTC3P53804 2025 aa14.34□□□□□ -0.11
CNEP1R1-208ENST00000566482 COL4A6Q14031 1691 aa14.33□□□□□ -0.11
CNEP1R1-208ENST00000566482 EPOPA6NHQ4 379 aa14.33□□□□□ -0.12
CNEP1R1-208ENST00000566482 C9IYK1 514 aa14.33□□□□□ -0.12
CNEP1R1-208ENST00000566482 ASAP2O43150 1006 aa14.33□□□□□ -0.12
CNEP1R1-208ENST00000566482 SRGAP2CP0DJJ0 459 aa14.33□□□□□ -0.12
CNEP1R1-208ENST00000566482 FOSL2P15408 326 aa14.33□□□□□ -0.12
CNEP1R1-208ENST00000566482 SFPQP23246 707 aaKnown RBP eCLIP14.33□□□□□ -0.12
CNEP1R1-208ENST00000566482 MXD4Q14582 209 aaPredicted RBP14.33□□□□□ -0.12
CNEP1R1-208ENST00000566482 CRIPAKQ8N1N5 446 aa14.33□□□□□ -0.12
CNEP1R1-208ENST00000566482 RNF149Q8NC42 400 aa14.33□□□□□ -0.12
CNEP1R1-208ENST00000566482 SPRYD3Q8NCJ5 442 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms