RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 HDAC6Q9UBN7 1215 aa14.59□□□□□ -0.07
LINC00563-201ENST00000566370 PHIPQ8WWQ0 1821 aa14.59□□□□□ -0.07
LINC00563-201ENST00000566370 SMCHD1A6NHR9 2005 aa14.59□□□□□ -0.07
LINC00563-201ENST00000566370 SLC9A1P19634 815 aa14.58□□□□□ -0.07
LINC00563-201ENST00000566370 LMNB1P20700 586 aa14.58□□□□□ -0.07
LINC00563-201ENST00000566370 SCP2P22307 547 aa14.58□□□□□ -0.07
LINC00563-201ENST00000566370 FMO5P49326 533 aa14.58□□□□□ -0.07
LINC00563-201ENST00000566370 RARRES1P49788 294 aa14.58□□□□□ -0.07
LINC00563-201ENST00000566370 COG2Q14746 738 aa14.58□□□□□ -0.07
LINC00563-201ENST00000566370 ZC2HC1CQ53FD0 456 aaPredicted RBP14.58□□□□□ -0.07
LINC00563-201ENST00000566370 NBPF12Q5TAG4 269 aaPredicted RBP14.58□□□□□ -0.07
LINC00563-201ENST00000566370 SNRNP48Q6IEG0 339 aaKnown RBP14.58□□□□□ -0.07
LINC00563-201ENST00000566370 ZNF572Q7Z3I7 529 aaPredicted RBP14.58□□□□□ -0.07
LINC00563-201ENST00000566370 SYCE1Q8N0S2 351 aa14.58□□□□□ -0.07
LINC00563-201ENST00000566370 MMGT1Q8N4V1 131 aa14.58□□□□□ -0.07
LINC00563-201ENST00000566370 RBM46Q8TBY0 533 aaKnown RBP14.58□□□□□ -0.07
LINC00563-201ENST00000566370 TMEM174Q8WUU8 243 aa14.58□□□□□ -0.07
LINC00563-201ENST00000566370 KIFAP3Q92845 792 aa14.58□□□□□ -0.07
LINC00563-201ENST00000566370 OSBPL9Q96SU4 736 aa14.58□□□□□ -0.07
LINC00563-201ENST00000566370 SENP7Q9BQF6 1050 aa14.58□□□□□ -0.07
LINC00563-201ENST00000566370 C17orf75Q9HAS0 396 aa14.58□□□□□ -0.07
LINC00563-201ENST00000566370 DMAC2Q9NW81 257 aa14.58□□□□□ -0.07
LINC00563-201ENST00000566370 HOXC10Q9NYD6 342 aa14.58□□□□□ -0.07
LINC00563-201ENST00000566370 GRID2IPA4D2P6 1211 aa14.58□□□□□ -0.08
LINC00563-201ENST00000566370 DHX15O43143 795 aaKnown RBP14.58□□□□□ -0.08
LINC00563-201ENST00000566370 TLR2O60603 784 aa14.58□□□□□ -0.08
LINC00563-201ENST00000566370 SEC31AO94979 1220 aaKnown RBP14.58□□□□□ -0.08
LINC00563-201ENST00000566370 TBC1D8O95759 1140 aa14.58□□□□□ -0.08
LINC00563-201ENST00000566370 PSAPP07602 524 aa14.58□□□□□ -0.08
LINC00563-201ENST00000566370 PTPRAP18433 802 aa14.58□□□□□ -0.08
LINC00563-201ENST00000566370 DSG3P32926 999 aa14.58□□□□□ -0.08
LINC00563-201ENST00000566370 CASP4P49662 377 aa14.58□□□□□ -0.08
LINC00563-201ENST00000566370 MRPS9P82933 396 aaKnown RBP14.58□□□□□ -0.08
LINC00563-201ENST00000566370 BFSP1Q12934 665 aa14.58□□□□□ -0.08
LINC00563-201ENST00000566370 ITGB3BPQ13352 177 aaPredicted RBP14.58□□□□□ -0.08
LINC00563-201ENST00000566370 GLE1Q53GS7 698 aaKnown RBP14.58□□□□□ -0.08
LINC00563-201ENST00000566370 XKR9Q5GH70 373 aa14.58□□□□□ -0.08
LINC00563-201ENST00000566370 UTP14CQ5TAP6 766 aaKnown RBP14.58□□□□□ -0.08
LINC00563-201ENST00000566370 IL31RAQ8NI17 732 aa14.58□□□□□ -0.08
LINC00563-201ENST00000566370 UBE2Q2Q8WVN8 375 aa14.58□□□□□ -0.08
LINC00563-201ENST00000566370 ATG4CQ96DT6 458 aa14.58□□□□□ -0.08
LINC00563-201ENST00000566370 MMS19Q96T76 1030 aa14.58□□□□□ -0.08
LINC00563-201ENST00000566370 TEX13BQ9BXU2 312 aa14.58□□□□□ -0.08
LINC00563-201ENST00000566370 STK33Q9BYT3 514 aa14.58□□□□□ -0.08
LINC00563-201ENST00000566370 ACAD9Q9H845 621 aa14.58□□□□□ -0.08
LINC00563-201ENST00000566370 ADAMTS1Q9UHI8 967 aa14.58□□□□□ -0.08
LINC00563-201ENST00000566370 TFR2Q9UP52 801 aa14.58□□□□□ -0.08
LINC00563-201ENST00000566370 PCDHA10Q9Y5I2 948 aa14.58□□□□□ -0.08
LINC00563-201ENST00000566370 CAPN6Q9Y6Q1 641 aa14.58□□□□□ -0.08
LINC00563-201ENST00000566370 DUSP10Q9Y6W6 482 aa14.58□□□□□ -0.08
LINC00563-201ENST00000566370 NFASCO94856 1347 aa14.57□□□□□ -0.08
LINC00563-201ENST00000566370 CES2O00748 559 aa14.57□□□□□ -0.08
LINC00563-201ENST00000566370 ATP2A1O14983 1001 aa14.57□□□□□ -0.08
LINC00563-201ENST00000566370 PPP1R37O75864 691 aa14.57□□□□□ -0.08
LINC00563-201ENST00000566370 H2AFZP0C0S5 128 aa14.57□□□□□ -0.08
LINC00563-201ENST00000566370 SOX5P35711 763 aa14.57□□□□□ -0.08
LINC00563-201ENST00000566370 MAPK7Q13164 816 aa14.57□□□□□ -0.08
LINC00563-201ENST00000566370 DMP1Q13316 513 aaPredicted RBP14.57□□□□□ -0.08
LINC00563-201ENST00000566370 ENOX2Q16206 610 aaKnown RBP14.57□□□□□ -0.08
LINC00563-201ENST00000566370 NOL9Q5SY16 702 aaKnown RBP14.57□□□□□ -0.08
LINC00563-201ENST00000566370 ANGEL2Q5VTE6 544 aaKnown RBP14.57□□□□□ -0.08
LINC00563-201ENST00000566370 ALKBH5Q6P6C2 394 aaKnown RBP14.57□□□□□ -0.08
LINC00563-201ENST00000566370 SLC30A10Q6XR72 485 aa14.57□□□□□ -0.08
LINC00563-201ENST00000566370 H2AFVQ71UI9 128 aa14.57□□□□□ -0.08
LINC00563-201ENST00000566370 XXYLT1Q8NBI6 393 aa14.57□□□□□ -0.08
LINC00563-201ENST00000566370 BORCS6Q96GS4 357 aa14.57□□□□□ -0.08
LINC00563-201ENST00000566370 SELENOOQ9BVL4 669 aa14.57□□□□□ -0.08
LINC00563-201ENST00000566370 STRA6Q9BX79 667 aa14.57□□□□□ -0.08
LINC00563-201ENST00000566370 MOV10L1Q9BXT6 1211 aaKnown RBP14.57□□□□□ -0.08
LINC00563-201ENST00000566370 FUT8Q9BYC5 575 aa14.57□□□□□ -0.08
LINC00563-201ENST00000566370 INTS2Q9H0H0 1204 aaKnown RBP14.57□□□□□ -0.08
LINC00563-201ENST00000566370 EPC1Q9H2F5 836 aa14.57□□□□□ -0.08
LINC00563-201ENST00000566370 PARP14Q460N5 1801 aa14.56□□□□□ -0.08
LINC00563-201ENST00000566370 A0A087X0T9 212 aa14.56□□□□□ -0.08
LINC00563-201ENST00000566370 A0A0A6YYK5 440 aaPredicted RBP14.56□□□□□ -0.08
LINC00563-201ENST00000566370 BUB1O43683 1085 aa14.56□□□□□ -0.08
LINC00563-201ENST00000566370 SRGAP2O75044 1071 aa14.56□□□□□ -0.08
LINC00563-201ENST00000566370 NR3C2P08235 984 aa14.56□□□□□ -0.08
LINC00563-201ENST00000566370 FAM228BP0C875 321 aa14.56□□□□□ -0.08
LINC00563-201ENST00000566370 ACTN1P12814 892 aa14.56□□□□□ -0.08
LINC00563-201ENST00000566370 JAM2P57087 298 aa14.56□□□□□ -0.08
LINC00563-201ENST00000566370 PTK2Q05397 1052 aa14.56□□□□□ -0.08
LINC00563-201ENST00000566370 BAATQ14032 418 aaPredicted RBP14.56□□□□□ -0.08
LINC00563-201ENST00000566370 SMC1AQ14683 1233 aaKnown RBP14.56□□□□□ -0.08
LINC00563-201ENST00000566370 HAUS6Q7Z4H7 955 aa14.56□□□□□ -0.08
LINC00563-201ENST00000566370 IRF2BP2Q7Z5L9 587 aa14.56□□□□□ -0.08
LINC00563-201ENST00000566370 VSIG10LQ86VR7 867 aa14.56□□□□□ -0.08
LINC00563-201ENST00000566370 GOLGA6L1Q8N7Z2 621 aa14.56□□□□□ -0.08
LINC00563-201ENST00000566370 MCPH1Q8NEM0 835 aa14.56□□□□□ -0.08
LINC00563-201ENST00000566370 ZFP91Q96JP5 570 aaPredicted RBP14.56□□□□□ -0.08
LINC00563-201ENST00000566370 FIZ1Q96SL8 496 aa14.56□□□□□ -0.08
LINC00563-201ENST00000566370 PNKPQ96T60 521 aa14.56□□□□□ -0.08
LINC00563-201ENST00000566370 MPHOSPH6Q99547 160 aaKnown RBP14.56□□□□□ -0.08
LINC00563-201ENST00000566370 VIPAS39Q9H9C1 493 aa14.56□□□□□ -0.08
LINC00563-201ENST00000566370 WRAP73Q9P2S5 460 aaPredicted RBP14.56□□□□□ -0.08
LINC00563-201ENST00000566370 APEX2Q9UBZ4 518 aa14.56□□□□□ -0.08
LINC00563-201ENST00000566370 FBXO40Q9UH90 709 aa14.56□□□□□ -0.08
LINC00563-201ENST00000566370 PCDHGC5Q9Y5F6 944 aa14.56□□□□□ -0.08
LINC00563-201ENST00000566370 ASTN2O75129 1339 aaPredicted RBP14.55□□□□□ -0.08
LINC00563-201ENST00000566370 ZBTB39O15060 712 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms