RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 ABHD4Q8TB40 342 aa6.42□□□□□ -1.38
CNOT1-209ENST00000566240 RSAD2Q8WXG1 361 aa6.42□□□□□ -1.38
CNOT1-209ENST00000566240 COA7Q96BR5 231 aa6.42□□□□□ -1.38
CNOT1-209ENST00000566240 MAP3K14Q99558 947 aa6.42□□□□□ -1.38
CNOT1-209ENST00000566240 RNF32Q9H0A6 362 aa6.42□□□□□ -1.38
CNOT1-209ENST00000566240 IFT122Q9HBG6 1241 aa6.42□□□□□ -1.38
CNOT1-209ENST00000566240 DDX21Q9NR30 783 aaKnown RBP eCLIP6.42□□□□□ -1.38
CNOT1-209ENST00000566240 YBX2Q9Y2T7 364 aaKnown RBP6.42□□□□□ -1.38
CNOT1-209ENST00000566240 HCFC2Q9Y5Z7 792 aa6.42□□□□□ -1.38
CNOT1-209ENST00000566240 MYPNQ86TC9 1320 aa6.42□□□□□ -1.38
CNOT1-209ENST00000566240 ANO9A1A5B4 782 aa6.41□□□□□ -1.38
CNOT1-209ENST00000566240 KIAA1324LA8MWY0 1029 aaPredicted RBP6.41□□□□□ -1.38
CNOT1-209ENST00000566240 APAF1O14727 1248 aa6.41□□□□□ -1.38
CNOT1-209ENST00000566240 MPIG6BO95866 241 aa6.41□□□□□ -1.38
CNOT1-209ENST00000566240 PFKMP08237 780 aa6.41□□□□□ -1.38
CNOT1-209ENST00000566240 ENO2P09104 434 aaPredicted RBP6.41□□□□□ -1.38
CNOT1-209ENST00000566240 IFIT2P09913 472 aaKnown RBP6.41□□□□□ -1.38
CNOT1-209ENST00000566240 MAPKAPK2P49137 400 aa6.41□□□□□ -1.38
CNOT1-209ENST00000566240 NEK3P51956 506 aa6.41□□□□□ -1.38
CNOT1-209ENST00000566240 CDK17Q00537 523 aa6.41□□□□□ -1.38
CNOT1-209ENST00000566240 VPS72Q15906 364 aa6.41□□□□□ -1.38
CNOT1-209ENST00000566240 ANO4Q32M45 955 aa6.41□□□□□ -1.38
CNOT1-209ENST00000566240 TEPPQ6URK8 271 aa6.41□□□□□ -1.38
CNOT1-209ENST00000566240 USP45Q70EL2 814 aa6.41□□□□□ -1.38
CNOT1-209ENST00000566240 MIB1Q86YT6 1006 aa6.41□□□□□ -1.38
CNOT1-209ENST00000566240 SLC41A1Q8IVJ1 513 aa6.41□□□□□ -1.38
CNOT1-209ENST00000566240 TP53INP2Q8IXH6 220 aa6.41□□□□□ -1.38
CNOT1-209ENST00000566240 GRAMD1CQ8IYS0 662 aa6.41□□□□□ -1.38
CNOT1-209ENST00000566240 CALML6Q8TD86 181 aa6.41□□□□□ -1.38
CNOT1-209ENST00000566240 DIS3LQ8TF46 1054 aaKnown RBP6.41□□□□□ -1.38
CNOT1-209ENST00000566240 TSPEARQ8WU66 669 aa6.41□□□□□ -1.38
CNOT1-209ENST00000566240 ACO2Q99798 780 aaKnown RBP6.41□□□□□ -1.38
CNOT1-209ENST00000566240 AMNQ9BXJ7 453 aa6.41□□□□□ -1.38
CNOT1-209ENST00000566240 BCAS3Q9H6U6 928 aa6.41□□□□□ -1.38
CNOT1-209ENST00000566240 SLC39A2Q9NP94 309 aa6.41□□□□□ -1.38
CNOT1-209ENST00000566240 PRSS50Q9UI38 385 aa6.41□□□□□ -1.38
CNOT1-209ENST00000566240 DENND2AQ9ULE3 1009 aa6.41□□□□□ -1.38
CNOT1-209ENST00000566240 DNM3Q9UQ16 869 aa6.41□□□□□ -1.38
CNOT1-209ENST00000566240 PTPN22Q9Y2R2 807 aa6.41□□□□□ -1.38
CNOT1-209ENST00000566240 PAX4O43316 350 aa6.4□□□□□ -1.38
CNOT1-209ENST00000566240 PCDH8O95206 1070 aa6.4□□□□□ -1.38
CNOT1-209ENST00000566240 MYBP10242 640 aa6.4□□□□□ -1.38
CNOT1-209ENST00000566240 THBS2P35442 1172 aa6.4□□□□□ -1.38
CNOT1-209ENST00000566240 SLC16A1P53985 500 aa6.4□□□□□ -1.38
CNOT1-209ENST00000566240 USP14P54578 494 aa6.4□□□□□ -1.38
CNOT1-209ENST00000566240 BCAR1P56945 870 aa6.4□□□□□ -1.38
CNOT1-209ENST00000566240 SPIDRQ14159 915 aa6.4□□□□□ -1.38
CNOT1-209ENST00000566240 NOLC1Q14978 699 aaKnown RBP eCLIP6.4□□□□□ -1.38
CNOT1-209ENST00000566240 ADGRF1Q5T601 910 aa6.4□□□□□ -1.38
CNOT1-209ENST00000566240 PRR18Q8N4B5 295 aa6.4□□□□□ -1.38
CNOT1-209ENST00000566240 ZBTB34Q8NCN2 500 aa6.4□□□□□ -1.38
CNOT1-209ENST00000566240 OR14C36Q8NHC7 312 aa6.4□□□□□ -1.38
CNOT1-209ENST00000566240 RPGRQ92834 1020 aaKnown RBP6.4□□□□□ -1.38
CNOT1-209ENST00000566240 MVB12AQ96EY5 273 aa6.4□□□□□ -1.38
CNOT1-209ENST00000566240 FAM193BQ96PV7 902 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-209ENST00000566240 ACE2Q9BYF1 805 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-209ENST00000566240 INCENPQ9NQS7 918 aa6.4□□□□□ -1.38
CNOT1-209ENST00000566240 GALNT8Q9NY28 637 aa6.4□□□□□ -1.38
CNOT1-209ENST00000566240 KLHL14Q9P2G3 628 aa6.4□□□□□ -1.38
CNOT1-209ENST00000566240 FAM50BQ9Y247 325 aa6.4□□□□□ -1.38
CNOT1-209ENST00000566240 ZNF839A8K0R7 811 aa6.39□□□□□ -1.39
CNOT1-209ENST00000566240 STAT5AP42229 794 aa6.39□□□□□ -1.39
CNOT1-209ENST00000566240 FXR1P51114 621 aaKnown RBP eCLIP6.39□□□□□ -1.396e-6■□□□□ 9.9
CNOT1-209ENST00000566240 CCT2P78371 535 aaKnown RBP6.39□□□□□ -1.39
CNOT1-209ENST00000566240 PFKPQ01813 784 aa6.39□□□□□ -1.39
CNOT1-209ENST00000566240 ZNF792Q3KQV3 632 aa6.39□□□□□ -1.39
CNOT1-209ENST00000566240 LRSAM1Q6UWE0 723 aa6.39□□□□□ -1.39
CNOT1-209ENST00000566240 ETV3LQ6ZN32 361 aa6.39□□□□□ -1.39
CNOT1-209ENST00000566240 SRGAP1Q7Z6B7 1085 aa6.39□□□□□ -1.39
CNOT1-209ENST00000566240 AMIGO3Q86WK7 504 aa6.39□□□□□ -1.39
CNOT1-209ENST00000566240 PROSER1Q86XN7 944 aa6.39□□□□□ -1.39
CNOT1-209ENST00000566240 FAM43AQ8N2R8 423 aa6.39□□□□□ -1.39
CNOT1-209ENST00000566240 C1GALT1C1Q96EU7 318 aa6.39□□□□□ -1.39
CNOT1-209ENST00000566240 MTG2Q9H4K7 406 aa6.39□□□□□ -1.39
CNOT1-209ENST00000566240 USP18Q9UMW8 372 aa6.39□□□□□ -1.39
CNOT1-209ENST00000566240 CDY2AQ9Y6F7 541 aa6.39□□□□□ -1.39
CNOT1-209ENST00000566240 A6NNZ2 444 aa6.38□□□□□ -1.39
CNOT1-209ENST00000566240 MAFGO15525 162 aa6.38□□□□□ -1.39
CNOT1-209ENST00000566240 WNT11O96014 354 aa6.38□□□□□ -1.39
CNOT1-209ENST00000566240 CELA3BP08861 270 aa6.38□□□□□ -1.39
CNOT1-209ENST00000566240 RHCEP18577 417 aa6.38□□□□□ -1.39
CNOT1-209ENST00000566240 ECE1P42892 770 aa6.38□□□□□ -1.39
CNOT1-209ENST00000566240 AFMP43652 599 aa6.38□□□□□ -1.39
CNOT1-209ENST00000566240 IRAK1P51617 712 aa6.38□□□□□ -1.39
CNOT1-209ENST00000566240 NKX3-2P78367 333 aa6.38□□□□□ -1.39
CNOT1-209ENST00000566240 RHDQ02161 417 aa6.38□□□□□ -1.39
CNOT1-209ENST00000566240 PPARAQ07869 468 aa6.38□□□□□ -1.39
CNOT1-209ENST00000566240 TMEM62Q0P6H9 643 aa6.38□□□□□ -1.39
CNOT1-209ENST00000566240 CR1LQ2VPA4 569 aa6.38□□□□□ -1.39
CNOT1-209ENST00000566240 PLEKHN1Q494U1 663 aaPredicted RBP6.38□□□□□ -1.39
CNOT1-209ENST00000566240 LONRF3Q496Y0 759 aa6.38□□□□□ -1.39
CNOT1-209ENST00000566240 ZC3H14Q6PJT7 736 aaKnown RBP6.38□□□□□ -1.39
CNOT1-209ENST00000566240 CAMKK1Q8N5S9 505 aa6.38□□□□□ -1.39
CNOT1-209ENST00000566240 IGDCC4Q8TDY8 1250 aa6.38□□□□□ -1.39
CNOT1-209ENST00000566240 GAB3Q8WWW8 586 aa6.38□□□□□ -1.39
CNOT1-209ENST00000566240 ALG3Q92685 438 aa6.38□□□□□ -1.39
CNOT1-209ENST00000566240 FATE1Q969F0 183 aa6.38□□□□□ -1.39
CNOT1-209ENST00000566240 DDX11Q96FC9 970 aa6.38□□□□□ -1.39
CNOT1-209ENST00000566240 INTS4Q96HW7 963 aaKnown RBP6.38□□□□□ -1.39
CNOT1-209ENST00000566240 FMNL2Q96PY5 1086 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms