RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 ZNF280DQ6N043 979 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 CHADLQ6NUI6 762 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 RSPH3Q86UC2 560 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 FBXO41Q8TF61 875 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 NELFBQ8WX92 580 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 NUP88Q99567 741 aaPredicted RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 BRD8Q9H0E9 1235 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 SCAF8Q9UPN6 1271 aaKnown RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 GOLGA8BA8MQT2 603 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 CTNND1O60716 968 aaKnown RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 ATP9AO75110 1047 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 MMP1P03956 469 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 ALOX15P16050 662 aaPredicted RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 GRIA2P42262 883 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 ATP5IP56385 69 aaPredicted RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 AUHQ13825 339 aaKnown RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 GIT2Q14161 759 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 SLC15A3Q8IY34 581 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 RNF10Q8N5U6 811 aaKnown RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 NAT14Q8WUY8 206 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 WASF1Q92558 559 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 KLHL29Q96CT2 875 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 NUDCD1Q96RS6 583 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 POLR3CQ9BUI4 534 aaPredicted RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 NLRC4Q9NPP4 1024 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 BTBD18B2RXH4 712 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 FTCDO95954 541 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 EIF4A3P38919 411 aaKnown RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 CCT6AP40227 531 aaKnown RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 OXCT1P55809 520 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 MIIPQ5JXC2 388 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 SPDYAQ5MJ70 313 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 KLHL35Q6PF15 583 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 TAF4BQ92750 862 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 HAUS7Q99871 368 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 GPCPD1Q9NPB8 672 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 RHBDL2Q9NX52 303 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 LNPEPQ9UIQ6 1025 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 SIK3Q9Y2K2 1263 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 HEG1Q9ULI3 1381 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 CAPN15O75808 1086 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 KRT14P02533 472 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 POTEJP0CG39 1038 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 HSPD1P10809 573 aaKnown RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 ARF4P18085 180 aaPredicted RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 PAK1Q13153 545 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 CFAP221Q4G0U5 840 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 RNF43Q68DV7 783 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 GALNT17Q6IS24 598 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 MARK2Q7KZI7 788 aaKnown RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 KIAA2013Q8IYS2 634 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 CKAP2Q8WWK9 683 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 LENG1Q96BZ8 264 aaPredicted RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 TRPV5Q9NQA5 729 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 CYLDQ9NQC7 956 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 SCOCQ9UIL1 159 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 PDGFRBP09619 1106 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 IFNAR1P17181 557 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 HSPA1LP34931 641 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 EIF2B5Q13144 721 aaKnown RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 MEI1Q5TIA1 1274 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 DDX42Q86XP3 938 aaKnown RBP eCLIP3.13□□□□□ -1.91
CHD9-218ENST00000566029 OLIG1Q8TAK6 271 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 TNFRSF25Q93038 417 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 TEKT1Q969V4 418 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 SLC7A6OSQ96CW6 309 aaPredicted RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 FAF1Q9UNN5 650 aaPredicted RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 A0A1B0GW55 424 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 STRNO43815 780 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 OPHN1O60890 802 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 DUX4L2P0CJ85 424 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 DUX4L3P0CJ86 424 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 DUX4L4P0CJ87 422 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 DUX4L5P0CJ88 424 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 DUX4L6P0CJ89 424 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 DUX4L7P0CJ90 424 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 TROVE2P10155 538 aaKnown RBP eCLIP3.13□□□□□ -1.91
CHD9-218ENST00000566029 CCNE1P24864 410 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 NEK3P51956 506 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 KRT17Q04695 432 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 MPP2Q14168 576 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 UBAP2Q5T6F2 1119 aaKnown RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 FAM91A1Q658Y4 838 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 HGSNATQ68CP4 663 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 DUPD1Q68J44 220 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 ANGPTL8Q6UXH0 198 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 TMC4Q7Z404 712 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 CROCCP2Q86T23 111 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 RETREG2Q8NC44 543 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 HHATLQ9HCP6 504 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 TXLNGQ9NUQ3 528 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 DUX4Q9UBX2 424 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 TTC7AQ9ULT0 858 aaPredicted RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 PLEKHG3A1L390 1219 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 GOLGA8JA6NMD2 632 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 EPHB6O15197 1021 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 DNAJC6O75061 913 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 UBTFL6P0CB48 400 aaPredicted RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 T-ENOLP0DO92 83 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 ZFXP17010 805 aaPredicted RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms