RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 B4E1Z4 1266 aa5.46□□□□□ -1.54
LINC00561-201ENST00000565815 HGSO14964 777 aaPredicted RBP5.46□□□□□ -1.54
LINC00561-201ENST00000565815 PRPF3O43395 683 aaKnown RBP5.46□□□□□ -1.54
LINC00561-201ENST00000565815 KPNA1P52294 538 aaPredicted RBP5.46□□□□□ -1.54
LINC00561-201ENST00000565815 CORO7P57737 925 aa5.46□□□□□ -1.54
LINC00561-201ENST00000565815 CBLL1Q75N03 491 aa5.46□□□□□ -1.54
LINC00561-201ENST00000565815 TMC6Q7Z403 805 aa5.46□□□□□ -1.54
LINC00561-201ENST00000565815 ZMAT4Q9H898 229 aa5.46□□□□□ -1.54
LINC00561-201ENST00000565815 UCKL1Q9NWZ5 548 aa5.46□□□□□ -1.54
LINC00561-201ENST00000565815 ASH2LQ9UBL3 628 aa5.46□□□□□ -1.54
LINC00561-201ENST00000565815 TRPM3Q9HCF6 1732 aaPredicted RBP5.45□□□□□ -1.54
LINC00561-201ENST00000565815 RAB3GAP2Q9H2M9 1393 aa5.45□□□□□ -1.54
LINC00561-201ENST00000565815 SLC12A8A0AV02 714 aa5.45□□□□□ -1.54
LINC00561-201ENST00000565815 TADA3O75528 432 aa5.45□□□□□ -1.54
LINC00561-201ENST00000565815 ALDH1L1O75891 902 aa5.45□□□□□ -1.54
LINC00561-201ENST00000565815 PDE6BP35913 854 aa5.45□□□□□ -1.54
LINC00561-201ENST00000565815 SPIRE1Q08AE8 756 aa5.45□□□□□ -1.54
LINC00561-201ENST00000565815 ARTNQ5T4W7 220 aa5.45□□□□□ -1.54
LINC00561-201ENST00000565815 IQSEC1Q6DN90 963 aa5.45□□□□□ -1.54
LINC00561-201ENST00000565815 RIOX2Q8IUF8 465 aa5.45□□□□□ -1.54
LINC00561-201ENST00000565815 SLC2A13Q96QE2 648 aa5.45□□□□□ -1.54
LINC00561-201ENST00000565815 BOCQ9BWV1 1114 aa5.45□□□□□ -1.54
LINC00561-201ENST00000565815 SLC39A2Q9NP94 309 aa5.45□□□□□ -1.54
LINC00561-201ENST00000565815 PRDM11Q9NQV5 511 aa5.45□□□□□ -1.54
LINC00561-201ENST00000565815 ADGRE2Q9UHX3 823 aa5.45□□□□□ -1.54
LINC00561-201ENST00000565815 DBR1Q9UK59 544 aaKnown RBP5.45□□□□□ -1.54
LINC00561-201ENST00000565815 PCDHB4Q9Y5E5 795 aa5.45□□□□□ -1.54
LINC00561-201ENST00000565815 YTHDC2Q9H6S0 1430 aaKnown RBP5.45□□□□□ -1.54
LINC00561-201ENST00000565815 OVOS2A0A0G2JMS6 1433 aa5.45□□□□□ -1.54
LINC00561-201ENST00000565815 OVOS2A0A0J9YW53 1432 aa5.45□□□□□ -1.54
LINC00561-201ENST00000565815 OVOS2Q6IE36 1432 aa5.45□□□□□ -1.54
LINC00561-201ENST00000565815 BUB1BO60566 1050 aaPredicted RBP5.45□□□□□ -1.54
LINC00561-201ENST00000565815 PMLP29590 882 aa5.45□□□□□ -1.54
LINC00561-201ENST00000565815 ERVK-21P61565 698 aa5.45□□□□□ -1.54
LINC00561-201ENST00000565815 SMAD3P84022 425 aaKnown RBP5.45□□□□□ -1.54
LINC00561-201ENST00000565815 SMAD2Q15796 467 aaKnown RBP5.45□□□□□ -1.54
LINC00561-201ENST00000565815 AHI1Q8N157 1196 aa5.45□□□□□ -1.54
LINC00561-201ENST00000565815 TCP11L2Q8N4U5 519 aa5.45□□□□□ -1.54
LINC00561-201ENST00000565815 PARP4Q9UKK3 1724 aaKnown RBP5.44□□□□□ -1.54
LINC00561-201ENST00000565815 NRKQ7Z2Y5 1582 aa5.44□□□□□ -1.54
LINC00561-201ENST00000565815 ODF1Q14990 250 aa5.44□□□□□ -1.54
LINC00561-201ENST00000565815 TTF1Q15361 905 aaPredicted RBP5.44□□□□□ -1.54
LINC00561-201ENST00000565815 SPPL2CQ8IUH8 684 aa5.44□□□□□ -1.54
LINC00561-201ENST00000565815 AGBL5Q8NDL9 886 aa5.44□□□□□ -1.54
LINC00561-201ENST00000565815 ORAI3Q9BRQ5 295 aa5.44□□□□□ -1.54
LINC00561-201ENST00000565815 B3GALT1Q9Y5Z6 326 aa5.44□□□□□ -1.54
LINC00561-201ENST00000565815 CPDO75976 1380 aa5.44□□□□□ -1.54
LINC00561-201ENST00000565815 MYOCOSA0A1B0GUC4 107 aa5.44□□□□□ -1.54
LINC00561-201ENST00000565815 MARCH6O60337 910 aa5.44□□□□□ -1.54
LINC00561-201ENST00000565815 C4BPAP04003 597 aaKnown RBP5.44□□□□□ -1.54
LINC00561-201ENST00000565815 S100BP04271 92 aaPredicted RBP5.44□□□□□ -1.54
LINC00561-201ENST00000565815 VIPR1P32241 457 aa5.44□□□□□ -1.54
LINC00561-201ENST00000565815 EPHB3P54753 998 aa5.44□□□□□ -1.54
LINC00561-201ENST00000565815 FIGNQ5HY92 759 aa5.44□□□□□ -1.54
LINC00561-201ENST00000565815 PCIF1Q9H4Z3 704 aa5.44□□□□□ -1.54
LINC00561-201ENST00000565815 ENDOUP21128 410 aaKnown RBP5.43□□□□□ -1.54
LINC00561-201ENST00000565815 RAB27AP51159 221 aa5.43□□□□□ -1.54
LINC00561-201ENST00000565815 EMC4Q5J8M3 183 aa5.43□□□□□ -1.54
LINC00561-201ENST00000565815 ZBTB41Q5SVQ8 909 aa5.43□□□□□ -1.54
LINC00561-201ENST00000565815 BTBD8Q5XKL5 378 aa5.43□□□□□ -1.54
LINC00561-201ENST00000565815 LRSAM1Q6UWE0 723 aa5.43□□□□□ -1.54
LINC00561-201ENST00000565815 TMC5Q6UXY8 1006 aa5.43□□□□□ -1.54
LINC00561-201ENST00000565815 PRR23BQ6ZRT6 265 aa5.43□□□□□ -1.54
LINC00561-201ENST00000565815 SPATS2Q86XZ4 545 aaKnown RBP5.43□□□□□ -1.54
LINC00561-201ENST00000565815 IRF2BP1Q8IU81 584 aa5.43□□□□□ -1.54
LINC00561-201ENST00000565815 SLC5A5Q92911 643 aa5.43□□□□□ -1.54
LINC00561-201ENST00000565815 BRINP2Q9C0B6 783 aa5.43□□□□□ -1.54
LINC00561-201ENST00000565815 ZFP64Q9NPA5 681 aa5.43□□□□□ -1.54
LINC00561-201ENST00000565815 MAGEL2Q9UJ55 1249 aa5.43□□□□□ -1.54
LINC00561-201ENST00000565815 ATP23Q9Y6H3 246 aa5.43□□□□□ -1.54
LINC00561-201ENST00000565815 SSH2Q76I76 1423 aa5.43□□□□□ -1.54
LINC00561-201ENST00000565815 CRYBG1Q9Y4K1 1723 aa5.43□□□□□ -1.54
LINC00561-201ENST00000565815 CAMTA1Q9Y6Y1 1673 aa5.43□□□□□ -1.54
LINC00561-201ENST00000565815 CYBBP04839 570 aa5.43□□□□□ -1.54
LINC00561-201ENST00000565815 RAC2P15153 192 aa5.43□□□□□ -1.54
LINC00561-201ENST00000565815 EXOSC10Q01780 885 aaKnown RBP5.43□□□□□ -1.54
LINC00561-201ENST00000565815 MCL1Q07820 350 aa5.43□□□□□ -1.54
LINC00561-201ENST00000565815 PCBP2Q15366 365 aaKnown RBP eCLIP5.43□□□□□ -1.54
LINC00561-201ENST00000565815 TERF2Q15554 542 aa5.43□□□□□ -1.54
LINC00561-201ENST00000565815 PAQR3Q6TCH7 311 aa5.43□□□□□ -1.54
LINC00561-201ENST00000565815 FLAD1Q8NFF5 587 aa5.43□□□□□ -1.54
LINC00561-201ENST00000565815 ASB15Q8WXK1 588 aa5.43□□□□□ -1.54
LINC00561-201ENST00000565815 ANO3Q9BYT9 981 aa5.43□□□□□ -1.54
LINC00561-201ENST00000565815 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.43□□□□□ -1.54
LINC00561-201ENST00000565815 ITSN1Q15811 1721 aa5.43□□□□□ -1.54
LINC00561-201ENST00000565815 TULP4Q9NRJ4 1543 aa5.43□□□□□ -1.54
LINC00561-201ENST00000565815 H7C1D1 291 aa5.42□□□□□ -1.54
LINC00561-201ENST00000565815 KRIT1O00522 736 aa5.42□□□□□ -1.54
LINC00561-201ENST00000565815 LRG1P02750 347 aa5.42□□□□□ -1.54
LINC00561-201ENST00000565815 OSMP13725 252 aa5.42□□□□□ -1.54
LINC00561-201ENST00000565815 ERVFRD-1P60508 538 aa5.42□□□□□ -1.54
LINC00561-201ENST00000565815 CR1LQ2VPA4 569 aa5.42□□□□□ -1.54
LINC00561-201ENST00000565815 LIPIQ6XZB0 460 aa5.42□□□□□ -1.54
LINC00561-201ENST00000565815 CABP7Q86V35 215 aa5.42□□□□□ -1.54
LINC00561-201ENST00000565815 SYT17Q9BSW7 474 aa5.42□□□□□ -1.54
LINC00561-201ENST00000565815 C14orf93Q9H972 538 aaKnown RBP5.42□□□□□ -1.54
LINC00561-201ENST00000565815 SPO11Q9Y5K1 396 aa5.42□□□□□ -1.54
LINC00561-201ENST00000565815 PIK3C2GO75747 1445 aa5.42□□□□□ -1.54
LINC00561-201ENST00000565815 SHTN1A0MZ66 631 aa5.42□□□□□ -1.54
LINC00561-201ENST00000565815 KDM1AO60341 852 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms