RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 SLC5A4Q9NY91 659 aa6.14□□□□□ -1.43
CHD9-215ENST00000565442 ZFR2Q9UPR6 939 aaKnown RBP6.14□□□□□ -1.43
CHD9-215ENST00000565442 APOBEC2Q9Y235 224 aaKnown RBP6.14□□□□□ -1.43
CHD9-215ENST00000565442 SLC4A7Q9Y6M7 1214 aa6.14□□□□□ -1.43
CHD9-215ENST00000565442 FAM90A27PA6NNH2 459 aa6.13□□□□□ -1.43
CHD9-215ENST00000565442 CLASP2O75122 1294 aaKnown RBP6.13□□□□□ -1.43
CHD9-215ENST00000565442 KATNA1O75449 491 aa6.13□□□□□ -1.43
CHD9-215ENST00000565442 PTPN1P18031 435 aaKnown RBP6.13□□□□□ -1.43
CHD9-215ENST00000565442 KIF11P52732 1056 aa6.13□□□□□ -1.43
CHD9-215ENST00000565442 EPHA5P54756 1037 aa6.13□□□□□ -1.43
CHD9-215ENST00000565442 OCRLQ01968 901 aa6.13□□□□□ -1.43
CHD9-215ENST00000565442 TMEM132BQ14DG7 1078 aa6.13□□□□□ -1.43
CHD9-215ENST00000565442 TRIM48Q8IWZ4 208 aa6.13□□□□□ -1.43
CHD9-215ENST00000565442 GIMAP8Q8ND71 665 aaPredicted RBP6.13□□□□□ -1.43
CHD9-215ENST00000565442 COG1Q8WTW3 980 aa6.13□□□□□ -1.43
CHD9-215ENST00000565442 EDAQ92838 391 aa6.13□□□□□ -1.43
CHD9-215ENST00000565442 LRRC37BQ96QE4 947 aa6.13□□□□□ -1.43
CHD9-215ENST00000565442 B3GALT1Q9Y5Z6 326 aa6.13□□□□□ -1.43
CHD9-215ENST00000565442 PHLDB1Q86UU1 1377 aa6.13□□□□□ -1.43
CHD9-215ENST00000565442 PRAMEF25A6NGN4 478 aa6.12□□□□□ -1.43
CHD9-215ENST00000565442 ALG1L2C9J202 215 aa6.12□□□□□ -1.43
CHD9-215ENST00000565442 KLHL18O94889 574 aa6.12□□□□□ -1.43
CHD9-215ENST00000565442 LSM12Q3MHD2 195 aaKnown RBP6.12□□□□□ -1.43
CHD9-215ENST00000565442 BRDTQ58F21 947 aaPredicted RBP6.12□□□□□ -1.43
CHD9-215ENST00000565442 SPATS2Q86XZ4 545 aaKnown RBP6.12□□□□□ -1.43
CHD9-215ENST00000565442 EFHBQ8N7U6 833 aa6.12□□□□□ -1.43
CHD9-215ENST00000565442 ELF4Q99607 663 aaPredicted RBP6.12□□□□□ -1.43
CHD9-215ENST00000565442 KCNH7Q9NS40 1196 aa6.12□□□□□ -1.43
CHD9-215ENST00000565442 TOMM22Q9NS69 142 aa6.12□□□□□ -1.43
CHD9-215ENST00000565442 SPO11Q9Y5K1 396 aa6.12□□□□□ -1.43
CHD9-215ENST00000565442 WASHC2CQ9Y4E1 1318 aa6.11□□□□□ -1.43
CHD9-215ENST00000565442 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.11□□□□□ -1.43
CHD9-215ENST00000565442 ACOT7O00154 380 aa6.11□□□□□ -1.43
CHD9-215ENST00000565442 TGM5O43548 720 aa6.11□□□□□ -1.43
CHD9-215ENST00000565442 C4BPAP04003 597 aaKnown RBP6.11□□□□□ -1.43
CHD9-215ENST00000565442 PDGFRBP09619 1106 aa6.11□□□□□ -1.43
CHD9-215ENST00000565442 COMTP21964 271 aa6.11□□□□□ -1.43
CHD9-215ENST00000565442 PTX3P26022 381 aaPredicted RBP6.11□□□□□ -1.43
CHD9-215ENST00000565442 INHBCP55103 352 aa6.11□□□□□ -1.43
CHD9-215ENST00000565442 PAN2Q504Q3 1202 aaKnown RBP6.11□□□□□ -1.43
CHD9-215ENST00000565442 IQSEC1Q6DN90 963 aa6.11□□□□□ -1.43
CHD9-215ENST00000565442 Q6ZUG5 572 aa6.11□□□□□ -1.43
CHD9-215ENST00000565442 HDGFL2Q7Z4V5 671 aaPredicted RBP6.11□□□□□ -1.43
CHD9-215ENST00000565442 DLG3Q92796 817 aa6.11□□□□□ -1.43
CHD9-215ENST00000565442 EXTL1Q92935 676 aa6.11□□□□□ -1.43
CHD9-215ENST00000565442 WDR26Q9H7D7 661 aa6.11□□□□□ -1.43
CHD9-215ENST00000565442 A0A087X1B8 175 aa6.1□□□□□ -1.43
CHD9-215ENST00000565442 GJA4P35212 333 aa6.1□□□□□ -1.43
CHD9-215ENST00000565442 DGCR2P98153 550 aa6.1□□□□□ -1.43
CHD9-215ENST00000565442 ITKQ08881 620 aa6.1□□□□□ -1.43
CHD9-215ENST00000565442 MTMR1Q13613 665 aa6.1□□□□□ -1.43
CHD9-215ENST00000565442 DDB1Q16531 1140 aa6.1□□□□□ -1.43
CHD9-215ENST00000565442 PLEKHG6Q3KR16 790 aa6.1□□□□□ -1.43
CHD9-215ENST00000565442 AGBL4Q5VU57 503 aa6.1□□□□□ -1.43
CHD9-215ENST00000565442 BROXQ5VW32 411 aa6.1□□□□□ -1.43
CHD9-215ENST00000565442 PASD1Q8IV76 773 aa6.1□□□□□ -1.43
CHD9-215ENST00000565442 IFNL2Q8IZJ0 200 aa6.1□□□□□ -1.43
CHD9-215ENST00000565442 SLC5A5Q92911 643 aa6.1□□□□□ -1.43
CHD9-215ENST00000565442 MTMR8Q96EF0 704 aa6.1□□□□□ -1.43
CHD9-215ENST00000565442 CCDC8Q9H0W5 538 aaPredicted RBP6.1□□□□□ -1.43
CHD9-215ENST00000565442 MS4A5Q9H3V2 200 aa6.1□□□□□ -1.43
CHD9-215ENST00000565442 VTA1Q9NP79 307 aa6.1□□□□□ -1.43
CHD9-215ENST00000565442 TYW1Q9NV66 732 aaKnown RBP6.1□□□□□ -1.43
CHD9-215ENST00000565442 HSPBP1Q9NZL4 362 aa6.1□□□□□ -1.43
CHD9-215ENST00000565442 RBPJLQ9UBG7 517 aa6.1□□□□□ -1.43
CHD9-215ENST00000565442 PCSK5Q92824 1860 aa6.09□□□□□ -1.43
CHD9-215ENST00000565442 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.09□□□□□ -1.43
CHD9-215ENST00000565442 RASSF10A6NK89 507 aa6.09□□□□□ -1.43
CHD9-215ENST00000565442 PRKD3O94806 890 aa6.09□□□□□ -1.43
CHD9-215ENST00000565442 FAHP16930 419 aa6.09□□□□□ -1.43
CHD9-215ENST00000565442 CSF2RBP32927 897 aa6.09□□□□□ -1.43
CHD9-215ENST00000565442 CC2D1AQ6P1N0 951 aaPredicted RBP6.09□□□□□ -1.43
CHD9-215ENST00000565442 GPR155Q7Z3F1 870 aa6.09□□□□□ -1.43
CHD9-215ENST00000565442 NECAB2Q7Z6G3 386 aa6.09□□□□□ -1.43
CHD9-215ENST00000565442 TAX1BP1Q86VP1 789 aa6.09□□□□□ -1.43
CHD9-215ENST00000565442 DNAJC10Q8IXB1 793 aa6.09□□□□□ -1.43
CHD9-215ENST00000565442 CNTD1Q8N815 330 aa6.09□□□□□ -1.43
CHD9-215ENST00000565442 CLRN3Q8NCR9 226 aa6.09□□□□□ -1.43
CHD9-215ENST00000565442 TTLL11Q8NHH1 800 aa6.09□□□□□ -1.43
CHD9-215ENST00000565442 AJUBAQ96IF1 538 aa6.09□□□□□ -1.43
CHD9-215ENST00000565442 PUS7LQ9H0K6 701 aaKnown RBP6.09□□□□□ -1.43
CHD9-215ENST00000565442 ACSS2Q9NR19 701 aa6.09□□□□□ -1.43
CHD9-215ENST00000565442 FOXP2O15409 715 aa6.08□□□□□ -1.44
CHD9-215ENST00000565442 ULK1O75385 1050 aa6.08□□□□□ -1.44
CHD9-215ENST00000565442 MMEP08473 750 aa6.08□□□□□ -1.44
CHD9-215ENST00000565442 SMAD3P84022 425 aaKnown RBP6.08□□□□□ -1.44
CHD9-215ENST00000565442 EXOSC10Q01780 885 aaKnown RBP6.08□□□□□ -1.44
CHD9-215ENST00000565442 TERF2Q15554 542 aa6.08□□□□□ -1.44
CHD9-215ENST00000565442 SMAD2Q15796 467 aaKnown RBP6.08□□□□□ -1.44
CHD9-215ENST00000565442 KRTAP15-1Q3LI76 137 aa6.08□□□□□ -1.44
CHD9-215ENST00000565442 CATSPEREQ5SY80 951 aa6.08□□□□□ -1.44
CHD9-215ENST00000565442 PHF19Q5T6S3 580 aa6.08□□□□□ -1.44
CHD9-215ENST00000565442 ESRP1Q6NXG1 681 aaKnown RBP6.08□□□□□ -1.44
CHD9-215ENST00000565442 FUKQ8N0W3 1084 aa6.08□□□□□ -1.44
CHD9-215ENST00000565442 NEU4Q8WWR8 484 aaPredicted RBP6.08□□□□□ -1.44
CHD9-215ENST00000565442 ASB15Q8WXK1 588 aa6.08□□□□□ -1.44
CHD9-215ENST00000565442 ERCC4Q92889 916 aaPredicted RBP6.08□□□□□ -1.44
CHD9-215ENST00000565442 SCYL1Q96KG9 808 aa6.08□□□□□ -1.44
CHD9-215ENST00000565442 PDGFDQ9GZP0 370 aaPredicted RBP6.08□□□□□ -1.44
CHD9-215ENST00000565442 DLL4Q9NR61 685 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms