RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 OXER1Q8TDS5 423 aa7.2□□□□□ -1.26
TCF4-228ENST00000565393 KHSRPQ92945 711 aaKnown RBP eCLIP7.2□□□□□ -1.26
TCF4-228ENST00000565393 CEP170P1Q96L14 293 aa7.2□□□□□ -1.26
TCF4-228ENST00000565393 FAM20AQ96MK3 541 aa7.2□□□□□ -1.26
TCF4-228ENST00000565393 NLRP4Q96MN2 994 aa7.2□□□□□ -1.26
TCF4-228ENST00000565393 NAP1L4Q99733 375 aaKnown RBP7.2□□□□□ -1.26
TCF4-228ENST00000565393 JPH2Q9BR39 696 aaPredicted RBP7.2□□□□□ -1.26
TCF4-228ENST00000565393 FDXACB1Q9BRP7 624 aaPredicted RBP7.2□□□□□ -1.26
TCF4-228ENST00000565393 RC3H2Q9HBD1 1191 aaKnown RBP7.2□□□□□ -1.26
TCF4-228ENST00000565393 BRMS1Q9HCU9 246 aa7.2□□□□□ -1.26
TCF4-228ENST00000565393 CHST12Q9NRB3 414 aa7.2□□□□□ -1.26
TCF4-228ENST00000565393 DACT1Q9NYF0 836 aa7.2□□□□□ -1.26
TCF4-228ENST00000565393 RAPGEFL1Q9UHV5 662 aa7.2□□□□□ -1.26
TCF4-228ENST00000565393 MYH7BA7E2Y1 1941 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 BAZ2BQ9UIF8 2168 aaKnown RBP7.19□□□□□ -1.26
TCF4-228ENST00000565393 EML1O00423 815 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 SLC37A4O43826 429 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 STBD1O95210 358 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 CTDNEP1O95476 244 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 EOMESO95936 686 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 P4HBP07237 508 aaKnown RBP7.19□□□□□ -1.26
TCF4-228ENST00000565393 SRGAP2CP0DJJ0 459 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 ALADP13716 330 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 GCFC2P16383 781 aaKnown RBP7.19□□□□□ -1.26
TCF4-228ENST00000565393 LAG3P18627 525 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 ATP2B1P20020 1258 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 KRT2P35908 639 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 LTBRP36941 435 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 ALDH7A1P49419 539 aaKnown RBP7.19□□□□□ -1.26
TCF4-228ENST00000565393 FOSBP53539 338 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 POLGP54098 1239 aaPredicted RBP7.19□□□□□ -1.26
TCF4-228ENST00000565393 NPEPPSP55786 919 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 ERVFC1P60507 584 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 UBE3AQ05086 875 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 DRP2Q13474 957 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 BMS1Q14692 1282 aaKnown RBP7.19□□□□□ -1.26
TCF4-228ENST00000565393 EPHA7Q15375 998 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 NPY5RQ15761 445 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 ME3Q16798 604 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 CSPP1Q1MSJ5 1256 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 CTC1Q2NKJ3 1217 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 TWF2Q6IBS0 349 aaKnown RBP7.19□□□□□ -1.26
TCF4-228ENST00000565393 NCAPH2Q6IBW4 605 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 KCNT2Q6UVM3 1135 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 ANO5Q75V66 913 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 TMC7Q7Z402 723 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 ADGRD2Q7Z7M1 963 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 KSR1Q8IVT5 923 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 EXOC8Q8IYI6 725 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 LINC01465Q8N7H1 131 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 TMEM87AQ8NBN3 555 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 ETNPPLQ8TBG4 499 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 SLC7A3Q8WY07 619 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 MBOAT7Q96N66 472 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 ZNF558Q96NG5 402 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 CASD1Q96PB1 797 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 LRFN3Q9BTN0 628 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 TMEM117Q9H0C3 514 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 CYP26B1Q9NR63 512 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 TLR9Q9NR96 1032 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 SPG21Q9NZD8 308 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 RGL1Q9NZL6 768 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 CD207Q9UJ71 328 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 PCDHA12Q9UN75 941 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 PCDHGC5Q9Y5F6 944 aa7.19□□□□□ -1.26
TCF4-228ENST00000565393 A0A0U1RQF3 1178 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 FAM86C2PA6NEL3 165 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 BTBD18B2RXH4 712 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 NT5C1B-RDH14C9J2C7 533 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 TBX3O15119 743 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 MBTPS2O43462 519 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 GPR37L1O60883 481 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 MAFO75444 373 aaPredicted RBP7.18□□□□□ -1.26
TCF4-228ENST00000565393 CXCL14O95715 111 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 SKIP12755 728 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 FDPSP14324 419 aaKnown RBP7.18□□□□□ -1.26
TCF4-228ENST00000565393 SFPQP23246 707 aaKnown RBP eCLIP7.18□□□□□ -1.26
TCF4-228ENST00000565393 YWHABP31946 246 aaKnown RBP7.18□□□□□ -1.26
TCF4-228ENST00000565393 TXKP42681 527 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 RNASELQ05823 741 aaKnown RBP7.18□□□□□ -1.26
TCF4-228ENST00000565393 NCBP1Q09161 790 aaKnown RBP7.18□□□□□ -1.26
TCF4-228ENST00000565393 NR5A1Q13285 461 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 PPP2R5CQ13362 524 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 CTTNQ14247 550 aaKnown RBP7.18□□□□□ -1.26
TCF4-228ENST00000565393 XKR9Q5GH70 373 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 PLPP4Q5VZY2 271 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 PLA2G4FQ68DD2 849 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 PDE12Q6L8Q7 609 aaKnown RBP7.18□□□□□ -1.26
TCF4-228ENST00000565393 LLGL2Q6P1M3 1020 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 B3GNT9Q6UX72 402 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 LRRC55Q6ZSA7 311 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 CATSPER4Q7RTX7 472 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 ZNF410Q86VK4 478 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 ADHFE1Q8IWW8 467 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 SLFN12Q8IYM2 578 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 EFHBQ8N7U6 833 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 ZNF579Q8NAF0 562 aaKnown RBP7.18□□□□□ -1.26
TCF4-228ENST00000565393 HELQQ8TDG4 1101 aa7.18□□□□□ -1.26
TCF4-228ENST00000565393 PRPF31Q8WWY3 499 aaKnown RBP7.18□□□□□ -1.26
TCF4-228ENST00000565393 MRPS27Q92552 414 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms