RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 TECP42680 631 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 SLC7A5Q01650 507 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 TRIM72Q6ZMU5 477 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 FBXO11Q86XK2 927 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 TBC1D19Q8N5T2 526 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 AGTP01019 485 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 DSG1Q02413 1049 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 BBS9Q3SYG4 887 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 OLFML2BQ68BL8 750 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 EME1Q96AY2 570 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 KIAA1586Q9HCI6 787 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 SLC39A2Q9NP94 309 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 AATFQ9NY61 560 aaKnown RBP eCLIP5.41□□□□□ -1.54
SMG1-211ENST00000565324 CEP72Q9P209 647 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.41□□□□□ -1.54
SMG1-211ENST00000565324 KIAA0232Q92628 1395 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 WDR91A4D1P6 747 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 ZBTB7BO15156 539 aaPredicted RBP5.41□□□□□ -1.54
SMG1-211ENST00000565324 FOXO3O43524 673 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 TAP1Q03518 808 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 RASGRF1Q13972 1273 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 C16orf72Q14CZ0 275 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 MYL10Q9BUA6 226 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 WNT8AQ9H1J5 351 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 NRBP2Q9NSY0 501 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 GTSE1Q9NYZ3 720 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 SUGT1Q9Y2Z0 365 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 ABCC2Q92887 1545 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 SOWAHDA6NJG2 315 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 MOCS3O95396 460 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 KRT14P02533 472 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 ANXA13P27216 316 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 GGCXP38435 758 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 SPATA21Q7Z572 469 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 TTC39CQ8N584 583 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 ALKBH8Q96BT7 664 aaKnown RBP5.41□□□□□ -1.54
SMG1-211ENST00000565324 SGSM3Q96HU1 749 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 EPC1Q9H2F5 836 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 KMT5AQ9NQR1 393 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 MAST1Q9Y2H9 1570 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 FAM107AO95990 144 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 S100A9P06702 114 aaKnown RBP5.41□□□□□ -1.54
SMG1-211ENST00000565324 EIF4A3P38919 411 aaKnown RBP5.41□□□□□ -1.54
SMG1-211ENST00000565324 LRRC31Q6UY01 552 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 KCNK16Q96T55 309 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 ZFYVE1Q9HBF4 777 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 UBE2TQ9NPD8 197 aaPredicted RBP5.41□□□□□ -1.54
SMG1-211ENST00000565324 GINM1Q9NU53 330 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 USP15Q9Y4E8 981 aaPredicted RBP5.41□□□□□ -1.54
SMG1-211ENST00000565324 LAMB3Q13751 1172 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 KIAA1755Q5JYT7 1200 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 MIS18BP1Q6P0N0 1132 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 FAM173BQ6P4H8 233 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 ALKBH5Q6P6C2 394 aaKnown RBP5.41□□□□□ -1.54
SMG1-211ENST00000565324 BPIFA3Q9BQP9 254 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 CYP4F11Q9HBI6 524 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 ABL1P00519 1130 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 FGGP02679 453 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 SLC4A1P02730 911 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 GSPT1P15170 499 aaKnown RBP5.41□□□□□ -1.54
SMG1-211ENST00000565324 PPARAQ07869 468 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 ARMCX4Q5H9R4 360 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 FAM45BPQ6NSW5 357 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 RIBC1Q8N443 379 aaPredicted RBP5.41□□□□□ -1.54
SMG1-211ENST00000565324 NDST4Q9H3R1 872 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 PAPOLBQ9NRJ5 636 aaKnown RBP5.41□□□□□ -1.54
SMG1-211ENST00000565324 SCN3BQ9NY72 215 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 APPL1Q9UKG1 709 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 REREQ9P2R6 1566 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 ZNF827Q17R98 1081 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 ARL6IP4Q66PJ3 421 aaKnown RBP5.41□□□□□ -1.54
SMG1-211ENST00000565324 SZRD1Q7Z422 152 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 NLRP14Q86W24 1093 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 CYGBQ8WWM9 190 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 SLITRK6Q9H5Y7 841 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 KRCC1Q9NPI7 259 aaPredicted RBP5.41□□□□□ -1.54
SMG1-211ENST00000565324 NFKBIL1Q9UBC1 381 aaPredicted RBP5.41□□□□□ -1.54
SMG1-211ENST00000565324 EDC4Q6P2E9 1401 aaKnown RBP5.41□□□□□ -1.54
SMG1-211ENST00000565324 SYNMO15061 1565 aa5.41□□□□□ -1.54
SMG1-211ENST00000565324 LOC102724159A0A0B4J2E5 919 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 PRR23AA6NEV1 266 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 GUCA1CO95843 209 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 MYBL1P10243 752 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 PWP2Q15269 919 aaKnown RBP5.4□□□□□ -1.54
SMG1-211ENST00000565324 ASPRV1Q53RT3 343 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 SYCP2LQ5T4T6 812 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 EFL1Q7Z2Z2 1120 aaKnown RBP5.4□□□□□ -1.54
SMG1-211ENST00000565324 PASD1Q8IV76 773 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 STAMQ92783 540 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 JARID2Q92833 1246 aaPredicted RBP5.4□□□□□ -1.54
SMG1-211ENST00000565324 RAD21L1Q9H4I0 556 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 GEMIN8Q9NWZ8 242 aaKnown RBP5.4□□□□□ -1.54
SMG1-211ENST00000565324 ADD3Q9UEY8 706 aaKnown RBP5.4□□□□□ -1.54
SMG1-211ENST00000565324 DCTN4Q9UJW0 460 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 ADGRA3Q8IWK6 1321 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 E5RI56 91 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 MFAP3LO75121 409 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 ARIH2O95376 493 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 SLFN12LQ6IEE8 588 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 PLA2G4DQ86XP0 818 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms