RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 F8W031 263 aaPredicted RBP6.75□□□□□ -1.33
PTPN9-204ENST00000564970 M0QX08 132 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 CES2O00748 559 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 RGS13O14921 159 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 PFDN6O15212 129 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 RASA4O43374 803 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 SNX3O60493 162 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 ATP9AO75110 1047 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 OAS1P00973 400 aaKnown RBP6.75□□□□□ -1.33
PTPN9-204ENST00000564970 PCP11498 1178 aaKnown RBP6.75□□□□□ -1.33
PTPN9-204ENST00000564970 CTRB1P17538 263 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 PRKACBP22694 351 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 CYLC1P35663 651 aaPredicted RBP6.75□□□□□ -1.33
PTPN9-204ENST00000564970 TMPOP42166 694 aaKnown RBP6.75□□□□□ -1.33
PTPN9-204ENST00000564970 PIK3CAP42336 1068 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 TXKP42681 527 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 RPL5P46777 297 aaKnown RBP6.75□□□□□ -1.33
PTPN9-204ENST00000564970 SARSP49591 514 aaKnown RBP6.75□□□□□ -1.33
PTPN9-204ENST00000564970 TUBP50607 506 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 KPNA1P52294 538 aaPredicted RBP6.75□□□□□ -1.33
PTPN9-204ENST00000564970 LRP8Q14114 963 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 GRM2Q14416 872 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 HLTFQ14527 1009 aaKnown RBP eCLIP6.75□□□□□ -1.33
PTPN9-204ENST00000564970 ANO4Q32M45 955 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 CEP78Q5JTW2 689 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 FAM209AQ5JX71 171 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 ZNF658Q5TYW1 1059 aaPredicted RBP6.75□□□□□ -1.33
PTPN9-204ENST00000564970 CTRB2Q6GPI1 263 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 LMOD2Q6P5Q4 547 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 C1orf228Q6PIY5 440 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 CCBE1Q6UXH8 406 aaPredicted RBP6.75□□□□□ -1.33
PTPN9-204ENST00000564970 PPP1R21Q6ZMI0 780 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 ARHGEF18Q6ZSZ5 1173 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 ANO5Q75V66 913 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 DGLUCYQ7Z3D6 616 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 LONP2Q86WA8 852 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 CNTROBQ8N137 903 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 SPATA5Q8NB90 893 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 GALNT6Q8NCL4 622 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 TTC9Q92623 222 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 PGM2Q96G03 612 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 CCDC138Q96M89 665 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 MMS19Q96T76 1030 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 CRNKL1Q9BZJ0 848 aaKnown RBP6.75□□□□□ -1.33
PTPN9-204ENST00000564970 LSG1Q9H089 658 aaKnown RBP6.75□□□□□ -1.33
PTPN9-204ENST00000564970 DPH5Q9H2P9 285 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 TLE6Q9H808 572 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 NMRK1Q9NWW6 199 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 ZDHHC7Q9NXF8 308 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.75□□□□□ -1.33
PTPN9-204ENST00000564970 STX18Q9P2W9 335 aaKnown RBP6.75□□□□□ -1.33
PTPN9-204ENST00000564970 TNFRSF10DQ9UBN6 386 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 AMOTL2Q9Y2J4 779 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 IFT52Q9Y366 437 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 HYOU1Q9Y4L1 999 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 TRIM17Q9Y577 477 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 CAPN6Q9Y6Q1 641 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 MYH15Q9Y2K3 1946 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 CAMSAP1Q5T5Y3 1602 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 RIMS2Q9UQ26 1411 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 UMODL1Q5DID0 1318 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 ATP10BO94823 1461 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 RICTORQ6R327 1708 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 CCDC169A6NNP5 214 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 GNAT3A8MTJ3 354 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 HNRNPCL2B2RXH8 293 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 ZNF701M0R085 212 aaPredicted RBP6.74□□□□□ -1.33
PTPN9-204ENST00000564970 YKT6O15498 198 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 CTNND1O60716 968 aaKnown RBP6.74□□□□□ -1.33
PTPN9-204ENST00000564970 RAB11FIP3O75154 756 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 TSPAN9O75954 239 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 KRT75O95678 551 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 KRT16P08779 473 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 TGFB3P10600 412 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 PYGMP11217 842 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 CDK4P11802 303 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 GNA11P29992 359 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 SLC16A2P36021 539 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 ME1P48163 572 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 IFNAR2P48551 515 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 GSSP48637 474 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 EMP3P54852 163 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 DSTNP60981 165 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 TNNC1P63316 161 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 KRT76Q01546 638 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 MAP3K10Q02779 954 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 RASSF7Q02833 373 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 SLC34A1Q06495 639 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 HNRNPDQ14103 355 aaKnown RBP6.74□□□□□ -1.33
PTPN9-204ENST00000564970 UBE4AQ14139 1066 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 POLA2Q14181 598 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 PTK2BQ14289 1009 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 LPIN1Q14693 890 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 PPP2R5EQ16537 467 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 SPRED3Q2MJR0 410 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 PROSER3Q2NL68 480 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 MYLK3Q32MK0 819 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 RABL6Q3YEC7 729 aaPredicted RBP6.74□□□□□ -1.33
PTPN9-204ENST00000564970 TMTC4Q5T4D3 741 aa6.74□□□□□ -1.33
PTPN9-204ENST00000564970 PPP2R2DQ66LE6 453 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms