RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 NOC2LQ9Y3T9 749 aaKnown RBP14.97□□□□□ -0.01
CLK3-216ENST00000564468 DENND3A2RUS2 1198 aa14.96□□□□□ -0.01
CLK3-216ENST00000564468 MUTP22033 750 aa14.96□□□□□ -0.01
CLK3-216ENST00000564468 EIF4BP23588 611 aaKnown RBP14.96□□□□□ -0.01
CLK3-216ENST00000564468 PLA2G5P39877 138 aa14.96□□□□□ -0.01
CLK3-216ENST00000564468 TECP42680 631 aa14.96□□□□□ -0.01
CLK3-216ENST00000564468 GPC3P51654 580 aa14.96□□□□□ -0.01
CLK3-216ENST00000564468 CCDC85BQ15834 202 aaPredicted RBP14.96□□□□□ -0.01
CLK3-216ENST00000564468 XKR9Q5GH70 373 aa14.96□□□□□ -0.01
CLK3-216ENST00000564468 HAUS3Q68CZ6 603 aa14.96□□□□□ -0.01
CLK3-216ENST00000564468 PLA2G4FQ68DD2 849 aa14.96□□□□□ -0.01
CLK3-216ENST00000564468 ZNF410Q86VK4 478 aa14.96□□□□□ -0.01
CLK3-216ENST00000564468 NLRP7Q8WX94 980 aa14.96□□□□□ -0.01
CLK3-216ENST00000564468 INTS4Q96HW7 963 aaKnown RBP14.96□□□□□ -0.01
CLK3-216ENST00000564468 SAMD11Q96NU1 681 aa14.96□□□□□ -0.01
CLK3-216ENST00000564468 TGS1Q96RS0 853 aaKnown RBP14.96□□□□□ -0.01
CLK3-216ENST00000564468 PPP1R16BQ96T49 567 aa14.96□□□□□ -0.01
CLK3-216ENST00000564468 ADAMTS10Q9H324 1103 aa14.96□□□□□ -0.01
CLK3-216ENST00000564468 C1orf112Q9NSG2 853 aa14.96□□□□□ -0.01
CLK3-216ENST00000564468 SUCLA2Q9P2R7 463 aaPredicted RBP14.96□□□□□ -0.01
CLK3-216ENST00000564468 WRAP73Q9P2S5 460 aaPredicted RBP14.96□□□□□ -0.01
CLK3-216ENST00000564468 ST3GAL5Q9UNP4 418 aa14.96□□□□□ -0.01
CLK3-216ENST00000564468 TMEM150BA6NC51 233 aa14.95□□□□□ -0.02
CLK3-216ENST00000564468 POTEMA6NI47 508 aa14.95□□□□□ -0.02
CLK3-216ENST00000564468 ASAP2O43150 1006 aa14.95□□□□□ -0.02
CLK3-216ENST00000564468 ZSCAN20P17040 1043 aaPredicted RBP14.95□□□□□ -0.02
CLK3-216ENST00000564468 FXR2P51116 673 aaKnown RBP eCLIP14.95□□□□□ -0.02
CLK3-216ENST00000564468 NPEPPSP55786 919 aa14.95□□□□□ -0.02
CLK3-216ENST00000564468 PTGDRQ13258 359 aa14.95□□□□□ -0.02
CLK3-216ENST00000564468 PDIA5Q14554 519 aa14.95□□□□□ -0.02
CLK3-216ENST00000564468 NPAS4Q8IUM7 802 aa14.95□□□□□ -0.02
CLK3-216ENST00000564468 SP7Q8TDD2 431 aaPredicted RBP14.95□□□□□ -0.02
CLK3-216ENST00000564468 TMEM40Q8WWA1 233 aa14.95□□□□□ -0.02
CLK3-216ENST00000564468 PSPC1Q8WXF1 523 aaKnown RBP14.95□□□□□ -0.02
CLK3-216ENST00000564468 SH2D3AQ9BRG2 576 aa14.95□□□□□ -0.02
CLK3-216ENST00000564468 POLR3CQ9BUI4 534 aaPredicted RBP14.95□□□□□ -0.02
CLK3-216ENST00000564468 DHX33Q9H6R0 707 aaKnown RBP14.95□□□□□ -0.02
CLK3-216ENST00000564468 COL4A6Q14031 1691 aa14.95□□□□□ -0.02
CLK3-216ENST00000564468 CHD9Q3L8U1 2897 aa14.95□□□□□ -0.02
CLK3-216ENST00000564468 FNDC1Q4ZHG4 1894 aaPredicted RBP14.95□□□□□ -0.02
CLK3-216ENST00000564468 LINC01553A4QN01 128 aa14.94□□□□□ -0.02
CLK3-216ENST00000564468 K7ELQ4 463 aaPredicted RBP14.94□□□□□ -0.02
CLK3-216ENST00000564468 GTPBP6O43824 516 aaPredicted RBP14.94□□□□□ -0.02
CLK3-216ENST00000564468 DGAT1O75907 488 aa14.94□□□□□ -0.02
CLK3-216ENST00000564468 DARSP14868 501 aaKnown RBP14.94□□□□□ -0.02
CLK3-216ENST00000564468 RPA1P27694 616 aa14.94□□□□□ -0.02
CLK3-216ENST00000564468 PRPHP41219 470 aa14.94□□□□□ -0.02
CLK3-216ENST00000564468 TOB1P50616 345 aaPredicted RBP14.94□□□□□ -0.02
CLK3-216ENST00000564468 ERVK-21P61565 698 aa14.94□□□□□ -0.02
CLK3-216ENST00000564468 FAM228AQ86W67 206 aa14.94□□□□□ -0.02
CLK3-216ENST00000564468 RHPN2Q8IUC4 686 aa14.94□□□□□ -0.02
CLK3-216ENST00000564468 ARNTL2Q8WYA1 636 aa14.94□□□□□ -0.02
CLK3-216ENST00000564468 NACC1Q96RE7 527 aa14.94□□□□□ -0.02
CLK3-216ENST00000564468 MTRQ99707 1265 aa14.94□□□□□ -0.02
CLK3-216ENST00000564468 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.94□□□□□ -0.02
CLK3-216ENST00000564468 RGS18Q9NS28 235 aa14.94□□□□□ -0.02
CLK3-216ENST00000564468 LRFN2Q9ULH4 789 aa14.94□□□□□ -0.02
CLK3-216ENST00000564468 PCDHB6Q9Y5E3 794 aa14.94□□□□□ -0.02
CLK3-216ENST00000564468 XIRP2A4UGR9 3374 aa14.93□□□□□ -0.02
CLK3-216ENST00000564468 PRRC2BQ5JSZ5 2229 aaKnown RBP14.93□□□□□ -0.02
CLK3-216ENST00000564468 LCHNA4D1U4 455 aa14.93□□□□□ -0.02
CLK3-216ENST00000564468 SFPQP23246 707 aaKnown RBP eCLIP14.93□□□□□ -0.02
CLK3-216ENST00000564468 SARSP49591 514 aaKnown RBP14.93□□□□□ -0.02
CLK3-216ENST00000564468 DRP2Q13474 957 aa14.93□□□□□ -0.02
CLK3-216ENST00000564468 NBR1Q14596 966 aa14.93□□□□□ -0.02
CLK3-216ENST00000564468 EMC2Q15006 297 aa14.93□□□□□ -0.02
CLK3-216ENST00000564468 DTHD1Q6ZMT9 781 aa14.93□□□□□ -0.02
CLK3-216ENST00000564468 SLC24A5Q71RS6 500 aa14.93□□□□□ -0.02
CLK3-216ENST00000564468 BRAPQ7Z569 592 aa14.93□□□□□ -0.02
CLK3-216ENST00000564468 RTN4RL1Q86UN2 441 aaPredicted RBP14.93□□□□□ -0.02
CLK3-216ENST00000564468 CATSPER3Q86XQ3 398 aa14.93□□□□□ -0.02
CLK3-216ENST00000564468 FIBCD1Q8N539 461 aa14.93□□□□□ -0.02
CLK3-216ENST00000564468 C4orf32Q8N8J7 132 aa14.93□□□□□ -0.02
CLK3-216ENST00000564468 LINC01599Q8WXQ3 324 aa14.93□□□□□ -0.02
CLK3-216ENST00000564468 SNX21Q969T3 373 aa14.93□□□□□ -0.02
CLK3-216ENST00000564468 ADAM2Q99965 735 aa14.93□□□□□ -0.02
CLK3-216ENST00000564468 TMX1Q9H3N1 280 aa14.93□□□□□ -0.02
CLK3-216ENST00000564468 CERS4Q9HA82 394 aa14.93□□□□□ -0.02
CLK3-216ENST00000564468 LRWD1Q9UFC0 647 aa14.93□□□□□ -0.02
CLK3-216ENST00000564468 RWDD3Q9Y3V2 267 aa14.93□□□□□ -0.02
CLK3-216ENST00000564468 PCDHB7Q9Y5E2 793 aa14.93□□□□□ -0.02
CLK3-216ENST00000564468 COL4A3BPQ9Y5P4 624 aa14.93□□□□□ -0.02
CLK3-216ENST00000564468 A0A087WZ62 844 aa14.92□□□□□ -0.02
CLK3-216ENST00000564468 BMP15O95972 392 aa14.92□□□□□ -0.02
CLK3-216ENST00000564468 SPATA31C1P0DKV0 1188 aa14.92□□□□□ -0.02
CLK3-216ENST00000564468 RARRES1P49788 294 aa14.92□□□□□ -0.02
CLK3-216ENST00000564468 MXD4Q14582 209 aaPredicted RBP14.92□□□□□ -0.02
CLK3-216ENST00000564468 ZNF579Q8NAF0 562 aaKnown RBP14.92□□□□□ -0.02
CLK3-216ENST00000564468 NLRP4Q96MN2 994 aa14.92□□□□□ -0.02
CLK3-216ENST00000564468 FDXACB1Q9BRP7 624 aaPredicted RBP14.92□□□□□ -0.02
CLK3-216ENST00000564468 ATP6V0A4Q9HBG4 840 aa14.92□□□□□ -0.02
CLK3-216ENST00000564468 CHST12Q9NRB3 414 aa14.92□□□□□ -0.02
CLK3-216ENST00000564468 DACT1Q9NYF0 836 aa14.92□□□□□ -0.02
CLK3-216ENST00000564468 DBR1Q9UK59 544 aaKnown RBP14.92□□□□□ -0.02
CLK3-216ENST00000564468 ADGRA3Q8IWK6 1321 aa14.92□□□□□ -0.02
CLK3-216ENST00000564468 MYH11P35749 1972 aa14.91□□□□□ -0.02
CLK3-216ENST00000564468 VPS37CA5D8V6 355 aaPredicted RBP14.91□□□□□ -0.02
CLK3-216ENST00000564468 C9IYK1 514 aa14.91□□□□□ -0.02
CLK3-216ENST00000564468 ZBTB39O15060 712 aa14.91□□□□□ -0.02
CLK3-216ENST00000564468 MED24O75448 989 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms