RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 USP40Q9NVE5 1235 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 IRAK4Q9NWZ3 460 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 REXO2Q9Y3B8 237 aaKnown RBP13.56□□□□□ -0.24
COMMD4-209ENST00000564068 ZNF233A6NK53 670 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 SGK1O00141 431 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 PHBP35232 272 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 STAT3P40763 770 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 ITIH3Q06033 890 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 PLCB4Q15147 1175 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 CASC4Q6P4E1 433 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 PPP4R3CPQ6ZMV5 832 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 DTX3LQ8TDB6 740 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 SH3RF3Q8TEJ3 882 aaPredicted RBP13.56□□□□□ -0.24
COMMD4-209ENST00000564068 RFFLQ8WZ73 363 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 VCX3AQ9NNX9 186 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 FAM53CQ9NYF3 392 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 CHORDC1Q9UHD1 332 aaPredicted RBP13.56□□□□□ -0.24
COMMD4-209ENST00000564068 PPP1R9AQ9ULJ8 1098 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 FAM187AA6NFU0 413 aa13.55□□□□□ -0.24
COMMD4-209ENST00000564068 RASSF10A6NK89 507 aa13.55□□□□□ -0.24
COMMD4-209ENST00000564068 FSBPO95073 299 aa13.55□□□□□ -0.24
COMMD4-209ENST00000564068 AGTP01019 485 aa13.55□□□□□ -0.24
COMMD4-209ENST00000564068 YWHAGP61981 247 aaKnown RBP eCLIP13.55□□□□□ -0.24
COMMD4-209ENST00000564068 KNOP1Q1ED39 458 aaKnown RBP13.55□□□□□ -0.24
COMMD4-209ENST00000564068 SLC30A9Q6PML9 568 aa13.55□□□□□ -0.24
COMMD4-209ENST00000564068 PAF1Q8N7H5 531 aa13.55□□□□□ -0.24
COMMD4-209ENST00000564068 SUPT20HQ8NEM7 779 aa13.55□□□□□ -0.24
COMMD4-209ENST00000564068 SLC35G2Q8TBE7 412 aa13.55□□□□□ -0.24
COMMD4-209ENST00000564068 SAYSD1Q9NPB0 183 aa13.55□□□□□ -0.24
COMMD4-209ENST00000564068 OVOS2A0A0G2JMS6 1433 aa13.55□□□□□ -0.24
COMMD4-209ENST00000564068 TMEM120BA0PK00 339 aa13.55□□□□□ -0.24
COMMD4-209ENST00000564068 MIF4GDA9UHW6 222 aaKnown RBP13.55□□□□□ -0.24
COMMD4-209ENST00000564068 KCNQ2O43526 872 aa13.55□□□□□ -0.24
COMMD4-209ENST00000564068 CSF1RP07333 972 aa13.55□□□□□ -0.24
COMMD4-209ENST00000564068 CHRNA3P32297 505 aa13.55□□□□□ -0.24
COMMD4-209ENST00000564068 HSPA9P38646 679 aaKnown RBP13.55□□□□□ -0.24
COMMD4-209ENST00000564068 SCNN1DP51172 638 aa13.55□□□□□ -0.24
COMMD4-209ENST00000564068 SKOR1P84550 965 aa13.55□□□□□ -0.24
COMMD4-209ENST00000564068 CTTNQ14247 550 aaKnown RBP13.55□□□□□ -0.24
COMMD4-209ENST00000564068 PKN1Q16512 942 aa13.55□□□□□ -0.24
COMMD4-209ENST00000564068 LGSNQ5TDP6 509 aa13.55□□□□□ -0.24
COMMD4-209ENST00000564068 BSPRYQ5W0U4 402 aa13.55□□□□□ -0.24
COMMD4-209ENST00000564068 TTBK2Q6IQ55 1244 aa13.55□□□□□ -0.24
COMMD4-209ENST00000564068 MSL3Q8N5Y2 521 aaKnown RBP13.55□□□□□ -0.24
COMMD4-209ENST00000564068 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.55□□□□□ -0.24
COMMD4-209ENST00000564068 GSDMBQ8TAX9 411 aa13.55□□□□□ -0.24
COMMD4-209ENST00000564068 DCTN3O75935 186 aa13.55□□□□□ -0.24
COMMD4-209ENST00000564068 ASPRV1Q53RT3 343 aa13.55□□□□□ -0.24
COMMD4-209ENST00000564068 ANKRD20A8PQ5CZ79 823 aa13.55□□□□□ -0.24
COMMD4-209ENST00000564068 SWT1Q5T5J6 900 aaKnown RBP13.55□□□□□ -0.24
COMMD4-209ENST00000564068 FBXO11Q86XK2 927 aa13.55□□□□□ -0.24
COMMD4-209ENST00000564068 TRIM59Q8IWR1 403 aa13.55□□□□□ -0.24
COMMD4-209ENST00000564068 ERP27Q96DN0 273 aa13.55□□□□□ -0.24
COMMD4-209ENST00000564068 CFAP57Q96MR6 1250 aa13.55□□□□□ -0.24
COMMD4-209ENST00000564068 EXOC7Q9UPT5 735 aa13.55□□□□□ -0.24
COMMD4-209ENST00000564068 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.55□□□□□ -0.24
COMMD4-209ENST00000564068 CFAP69A5D8W1 941 aa13.54□□□□□ -0.24
COMMD4-209ENST00000564068 MYCLP12524 364 aaPredicted RBP13.54□□□□□ -0.24
COMMD4-209ENST00000564068 ITGA4P13612 1032 aa13.54□□□□□ -0.24
COMMD4-209ENST00000564068 CCND1P24385 295 aa13.54□□□□□ -0.24
COMMD4-209ENST00000564068 SLFN13Q68D06 897 aa13.54□□□□□ -0.24
COMMD4-209ENST00000564068 RNF207Q6ZRF8 634 aa13.54□□□□□ -0.24
COMMD4-209ENST00000564068 JAMLQ86YT9 394 aa13.54□□□□□ -0.24
COMMD4-209ENST00000564068 ABTB1Q969K4 478 aaPredicted RBP13.54□□□□□ -0.24
COMMD4-209ENST00000564068 ERP44Q9BS26 406 aa13.54□□□□□ -0.24
COMMD4-209ENST00000564068 SEMA6BQ9H3T3 888 aa13.54□□□□□ -0.24
COMMD4-209ENST00000564068 ZFP69BQ9UJL9 534 aa13.54□□□□□ -0.24
COMMD4-209ENST00000564068 LEMD3Q9Y2U8 911 aa13.54□□□□□ -0.24
COMMD4-209ENST00000564068 GOLGA8IPA6NC78 632 aa13.54□□□□□ -0.24
COMMD4-209ENST00000564068 GOLGA8JA6NMD2 632 aa13.54□□□□□ -0.24
COMMD4-209ENST00000564068 SNAP25P60880 206 aa13.54□□□□□ -0.24
COMMD4-209ENST00000564068 GRM4Q14833 912 aa13.54□□□□□ -0.24
COMMD4-209ENST00000564068 GPR162Q16538 588 aa13.54□□□□□ -0.24
COMMD4-209ENST00000564068 PRPF38AQ8NAV1 312 aaKnown RBP13.54□□□□□ -0.24
COMMD4-209ENST00000564068 MAML1Q92585 1016 aa13.54□□□□□ -0.24
COMMD4-209ENST00000564068 KAT2BQ92831 832 aa13.54□□□□□ -0.24
COMMD4-209ENST00000564068 HAUS1Q96CS2 278 aa13.54□□□□□ -0.24
COMMD4-209ENST00000564068 ZBTB12Q9Y330 459 aaPredicted RBP13.54□□□□□ -0.24
COMMD4-209ENST00000564068 PLS3P13797 630 aa13.54□□□□□ -0.24
COMMD4-209ENST00000564068 DYNLT1P63172 113 aa13.54□□□□□ -0.24
COMMD4-209ENST00000564068 FAM102BQ5T8I3 360 aa13.54□□□□□ -0.24
COMMD4-209ENST00000564068 SPICE1Q8N0Z3 855 aa13.54□□□□□ -0.24
COMMD4-209ENST00000564068 C9orf72Q96LT7 481 aa13.54□□□□□ -0.24
COMMD4-209ENST00000564068 GPR101Q96P66 508 aaPredicted RBP13.54□□□□□ -0.24
COMMD4-209ENST00000564068 TTC1Q99614 292 aa13.54□□□□□ -0.24
COMMD4-209ENST00000564068 PARVGQ9HBI0 331 aa13.54□□□□□ -0.24
COMMD4-209ENST00000564068 KBTBD4Q9NVX7 518 aa13.54□□□□□ -0.24
COMMD4-209ENST00000564068 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.54□□□□□ -0.24
COMMD4-209ENST00000564068 STK24Q9Y6E0 443 aa13.54□□□□□ -0.24
COMMD4-209ENST00000564068 INHBAP08476 426 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 RANBP1P43487 201 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 GCLMP48507 274 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 MXI1P50539 228 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 ERVK-9P63128 1117 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 GPC5P78333 572 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 SEMA3FQ13275 785 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 NT5C1BQ96P26 610 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 C1orf112Q9NSG2 853 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 ANAPC7Q9UJX3 599 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 USP32Q8NFA0 1604 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms