RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 CDK7P50613 346 aa29.93■■■□□ 2.38
SH3GL3-205ENST00000563901 KSR1Q8IVT5 923 aa29.93■■■□□ 2.38
SH3GL3-205ENST00000563901 ELOA2Q8IYF1 753 aaPredicted RBP29.93■■■□□ 2.38
SH3GL3-205ENST00000563901 RETREG2Q8NC44 543 aa29.93■■■□□ 2.38
SH3GL3-205ENST00000563901 ASAP3Q8TDY4 903 aa29.93■■■□□ 2.38
SH3GL3-205ENST00000563901 ZNF668Q96K58 619 aaPredicted RBP29.93■■■□□ 2.38
SH3GL3-205ENST00000563901 HOOK1Q9UJC3 728 aaKnown RBP29.93■■■□□ 2.38
SH3GL3-205ENST00000563901 TBCAO75347 108 aaKnown RBP29.92■■■□□ 2.38
SH3GL3-205ENST00000563901 CNNM4Q6P4Q7 775 aa29.92■■■□□ 2.38
SH3GL3-205ENST00000563901 PANK4Q9NVE7 773 aa29.92■■■□□ 2.38
SH3GL3-205ENST00000563901 VTNP04004 478 aa29.91■■■□□ 2.38
SH3GL3-205ENST00000563901 RPN1P04843 607 aaKnown RBP29.91■■■□□ 2.38
SH3GL3-205ENST00000563901 PTPN11Q06124 597 aaPredicted RBP29.91■■■□□ 2.38
SH3GL3-205ENST00000563901 TMEM62Q0P6H9 643 aa29.91■■■□□ 2.38
SH3GL3-205ENST00000563901 KIAA0319LQ8IZA0 1049 aa29.91■■■□□ 2.38
SH3GL3-205ENST00000563901 DNAJB3Q8WWF6 145 aa29.91■■■□□ 2.38
SH3GL3-205ENST00000563901 SUCLA2Q9P2R7 463 aaPredicted RBP29.91■■■□□ 2.38
SH3GL3-205ENST00000563901 ODF2LQ9ULJ1 636 aa29.91■■■□□ 2.38
SH3GL3-205ENST00000563901 PQBP1O60828 265 aaKnown RBP29.9■■■□□ 2.38
SH3GL3-205ENST00000563901 FAM13AO94988 1023 aa29.9■■■□□ 2.38
SH3GL3-205ENST00000563901 MYL1P05976 194 aa29.9■■■□□ 2.38
SH3GL3-205ENST00000563901 ARL2P36404 184 aa29.9■■■□□ 2.38
SH3GL3-205ENST00000563901 COASYQ13057 564 aa29.9■■■□□ 2.38
SH3GL3-205ENST00000563901 KMT5BQ4FZB7 885 aa29.9■■■□□ 2.38
SH3GL3-205ENST00000563901 ISM2Q6H9L7 571 aa29.9■■■□□ 2.38
SH3GL3-205ENST00000563901 NECAB2Q7Z6G3 386 aa29.9■■■□□ 2.38
SH3GL3-205ENST00000563901 SFR1Q86XK3 245 aa29.9■■■□□ 2.38
SH3GL3-205ENST00000563901 PRPF31Q8WWY3 499 aaKnown RBP29.9■■■□□ 2.38
SH3GL3-205ENST00000563901 JPH2Q9BR39 696 aaPredicted RBP29.9■■■□□ 2.38
SH3GL3-205ENST00000563901 TBC1D7Q9P0N9 293 aa29.9■■■□□ 2.38
SH3GL3-205ENST00000563901 ALPK3Q96L96 1907 aa29.9■■■□□ 2.38
SH3GL3-205ENST00000563901 SIP14410 1827 aa29.9■■■□□ 2.38
SH3GL3-205ENST00000563901 GLRA2P23416 452 aa29.89■■■□□ 2.38
SH3GL3-205ENST00000563901 TRIM60Q495X7 471 aa29.89■■■□□ 2.38
SH3GL3-205ENST00000563901 UNC13DQ70J99 1090 aa29.89■■■□□ 2.38
SH3GL3-205ENST00000563901 SERINC5Q86VE9 423 aa29.89■■■□□ 2.38
SH3GL3-205ENST00000563901 FAM126BQ8IXS8 530 aa29.89■■■□□ 2.38
SH3GL3-205ENST00000563901 SMARCE1Q969G3 411 aa29.89■■■□□ 2.38
SH3GL3-205ENST00000563901 TIPINQ9BVW5 301 aa29.89■■■□□ 2.38
SH3GL3-205ENST00000563901 AKT3Q9Y243 479 aa29.89■■■□□ 2.38
SH3GL3-205ENST00000563901 FRMD3A2A2Y4 597 aa29.89■■■□□ 2.37
SH3GL3-205ENST00000563901 BIN1O00499 593 aa29.89■■■□□ 2.37
SH3GL3-205ENST00000563901 ZNF131P52739 623 aa29.89■■■□□ 2.37
SH3GL3-205ENST00000563901 IER5Q5VY09 327 aa29.89■■■□□ 2.37
SH3GL3-205ENST00000563901 UBE2Q1Q7Z7E8 422 aa29.89■■■□□ 2.37
SH3GL3-205ENST00000563901 RHPN2Q8IUC4 686 aa29.89■■■□□ 2.37
SH3GL3-205ENST00000563901 EXOC8Q8IYI6 725 aa29.89■■■□□ 2.37
SH3GL3-205ENST00000563901 MYCT1Q8N699 235 aa29.89■■■□□ 2.37
SH3GL3-205ENST00000563901 DHX38Q92620 1227 aaKnown RBP29.89■■■□□ 2.37
SH3GL3-205ENST00000563901 KIFAP3Q92845 792 aa29.89■■■□□ 2.37
SH3GL3-205ENST00000563901 DRC1Q96MC2 740 aa29.89■■■□□ 2.37
SH3GL3-205ENST00000563901 FGFBP2Q9BYJ0 223 aa29.89■■■□□ 2.37
SH3GL3-205ENST00000563901 KIAA1468Q9P260 1216 aa29.89■■■□□ 2.37
SH3GL3-205ENST00000563901 NOD1Q9Y239 953 aa29.89■■■□□ 2.37
SH3GL3-205ENST00000563901 SMIM35A0A1B0GVV1 85 aa29.88■■■□□ 2.37
SH3GL3-205ENST00000563901 CCDC85CA6NKD9 419 aa29.88■■■□□ 2.37
SH3GL3-205ENST00000563901 GAS2O43903 313 aaKnown RBP29.88■■■□□ 2.37
SH3GL3-205ENST00000563901 LRRC26Q2I0M4 334 aa29.88■■■□□ 2.37
SH3GL3-205ENST00000563901 CCDC65Q8IXS2 484 aa29.88■■■□□ 2.37
SH3GL3-205ENST00000563901 SPATA20Q8TB22 786 aa29.88■■■□□ 2.37
SH3GL3-205ENST00000563901 TCP11Q8WWU5 503 aa29.88■■■□□ 2.37
SH3GL3-205ENST00000563901 PSPC1Q8WXF1 523 aaKnown RBP29.88■■■□□ 2.37
SH3GL3-205ENST00000563901 KIFC3Q9BVG8 833 aa29.88■■■□□ 2.37
SH3GL3-205ENST00000563901 PARVGQ9HBI0 331 aa29.88■■■□□ 2.37
SH3GL3-205ENST00000563901 TMOD1P28289 359 aa29.87■■■□□ 2.37
SH3GL3-205ENST00000563901 SARSP49591 514 aaKnown RBP29.87■■■□□ 2.37
SH3GL3-205ENST00000563901 DNM2P50570 870 aa29.87■■■□□ 2.37
SH3GL3-205ENST00000563901 PEX3P56589 373 aa29.87■■■□□ 2.37
SH3GL3-205ENST00000563901 LAMTOR4Q0VGL1 99 aa29.87■■■□□ 2.37
SH3GL3-205ENST00000563901 SNX17Q15036 470 aa29.87■■■□□ 2.37
SH3GL3-205ENST00000563901 HERC4Q5GLZ8 1057 aaPredicted RBP29.87■■■□□ 2.37
SH3GL3-205ENST00000563901 TNS4Q8IZW8 715 aa29.87■■■□□ 2.37
SH3GL3-205ENST00000563901 SYAP1Q96A49 352 aaPredicted RBP29.87■■■□□ 2.37
SH3GL3-205ENST00000563901 MAN1B1Q9UKM7 699 aa29.87■■■□□ 2.37
SH3GL3-205ENST00000563901 SMC2O95347 1197 aa29.86■■■□□ 2.37
SH3GL3-205ENST00000563901 CAPSQ13938 189 aa29.86■■■□□ 2.37
SH3GL3-205ENST00000563901 RBM43Q6ZSC3 357 aaKnown RBP29.86■■■□□ 2.37
SH3GL3-205ENST00000563901 GLIS3Q8NEA6 775 aa29.86■■■□□ 2.37
SH3GL3-205ENST00000563901 MAP7D2Q96T17 732 aa29.86■■■□□ 2.37
SH3GL3-205ENST00000563901 ATP11BQ9Y2G3 1177 aa29.86■■■□□ 2.37
SH3GL3-205ENST00000563901 COL4A3BPQ9Y5P4 624 aa29.86■■■□□ 2.37
SH3GL3-205ENST00000563901 PVALEFA0A1B0GWK0 134 aa29.85■■■□□ 2.37
SH3GL3-205ENST00000563901 PLS3P13797 630 aa29.85■■■□□ 2.37
SH3GL3-205ENST00000563901 EHHADHQ08426 723 aa29.85■■■□□ 2.37
SH3GL3-205ENST00000563901 ODR4Q5SWX8 454 aa29.85■■■□□ 2.37
SH3GL3-205ENST00000563901 NLRP4Q96MN2 994 aa29.85■■■□□ 2.37
SH3GL3-205ENST00000563901 GZF1Q9H116 711 aaPredicted RBP29.85■■■□□ 2.37
SH3GL3-205ENST00000563901 EXOC1Q9NV70 894 aa29.85■■■□□ 2.37
SH3GL3-205ENST00000563901 CD4P01730 458 aa29.85■■■□□ 2.37
SH3GL3-205ENST00000563901 SRGAP2CP0DJJ0 459 aa29.85■■■□□ 2.37
SH3GL3-205ENST00000563901 CAPN2P17655 700 aa29.85■■■□□ 2.37
SH3GL3-205ENST00000563901 RTP1P59025 263 aa29.85■■■□□ 2.37
SH3GL3-205ENST00000563901 TLE2Q04725 743 aa29.85■■■□□ 2.37
SH3GL3-205ENST00000563901 TAF2Q6P1X5 1199 aa29.85■■■□□ 2.37
SH3GL3-205ENST00000563901 FIZ1Q96SL8 496 aa29.85■■■□□ 2.37
SH3GL3-205ENST00000563901 ADGRA3Q8IWK6 1321 aa29.85■■■□□ 2.37
SH3GL3-205ENST00000563901 CCDC169A6NNP5 214 aa29.84■■■□□ 2.37
SH3GL3-205ENST00000563901 NMT1P30419 496 aaKnown RBP29.84■■■□□ 2.37
SH3GL3-205ENST00000563901 NPTX2P47972 431 aa29.84■■■□□ 2.37
SH3GL3-205ENST00000563901 PTK7Q13308 1070 aa29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms