RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 KCNMB3Q9NPA1 279 aa19.85■□□□□ 0.77
NME3-205ENST00000563854 RNF216Q9NWF9 866 aaPredicted RBP19.85■□□□□ 0.77
NME3-205ENST00000563854 HCSTQ9UBK5 93 aa19.85■□□□□ 0.77
NME3-205ENST00000563854 VAV3Q9UKW4 847 aa19.85■□□□□ 0.77
NME3-205ENST00000563854 PLAGL2Q9UPG8 496 aa19.85■□□□□ 0.77
NME3-205ENST00000563854 ATG2AQ2TAZ0 1938 aa19.84■□□□□ 0.77
NME3-205ENST00000563854 CSDE1O75534 798 aaKnown RBP19.84■□□□□ 0.77
NME3-205ENST00000563854 ITGB1P05556 798 aa19.84■□□□□ 0.77
NME3-205ENST00000563854 DNM2P50570 870 aa19.84■□□□□ 0.77
NME3-205ENST00000563854 PPP2R5CQ13362 524 aa19.84■□□□□ 0.77
NME3-205ENST00000563854 LEXMQ3ZCV2 418 aa19.84■□□□□ 0.77
NME3-205ENST00000563854 IGFLR1Q9H665 355 aa19.84■□□□□ 0.77
NME3-205ENST00000563854 TMEM161AQ9NX61 479 aa19.84■□□□□ 0.77
NME3-205ENST00000563854 STBD1O95210 358 aa19.83■□□□□ 0.77
NME3-205ENST00000563854 DARSP14868 501 aaKnown RBP19.83■□□□□ 0.77
NME3-205ENST00000563854 QARSP47897 775 aaKnown RBP19.83■□□□□ 0.77
NME3-205ENST00000563854 DSC3Q14574 896 aa19.83■□□□□ 0.77
NME3-205ENST00000563854 PTCRAQ6ISU1 281 aaPredicted RBP19.83■□□□□ 0.77
NME3-205ENST00000563854 ANO5Q75V66 913 aa19.83■□□□□ 0.77
NME3-205ENST00000563854 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.83■□□□□ 0.77
NME3-205ENST00000563854 P2RX5Q93086 422 aa19.83■□□□□ 0.77
NME3-205ENST00000563854 PABPC5Q96DU9 382 aaKnown RBP19.83■□□□□ 0.77
NME3-205ENST00000563854 GCOM2Q9BZD3 368 aaPredicted RBP19.83■□□□□ 0.77
NME3-205ENST00000563854 BMP2KQ9NSY1 1161 aaPredicted RBP19.83■□□□□ 0.77
NME3-205ENST00000563854 SUCLA2Q9P2R7 463 aaPredicted RBP19.83■□□□□ 0.77
NME3-205ENST00000563854 BAG4O95429 457 aaKnown RBP19.82■□□□□ 0.76
NME3-205ENST00000563854 IL9P15248 144 aa19.82■□□□□ 0.76
NME3-205ENST00000563854 DNAJB1P25685 340 aa19.82■□□□□ 0.76
NME3-205ENST00000563854 NPEPPSP55786 919 aa19.82■□□□□ 0.76
NME3-205ENST00000563854 HYAL1Q12794 435 aa19.82■□□□□ 0.76
NME3-205ENST00000563854 CLUL1Q15846 466 aa19.82■□□□□ 0.76
NME3-205ENST00000563854 FAM43BQ6ZT52 329 aaPredicted RBP19.82■□□□□ 0.76
NME3-205ENST00000563854 RHPN2Q8IUC4 686 aa19.82■□□□□ 0.76
NME3-205ENST00000563854 ABI1Q8IZP0 508 aa19.82■□□□□ 0.76
NME3-205ENST00000563854 ZNF710Q8N1W2 664 aa19.82■□□□□ 0.76
NME3-205ENST00000563854 POF1BQ8WVV4 589 aa19.82■□□□□ 0.76
NME3-205ENST00000563854 HAS1Q92839 578 aa19.82■□□□□ 0.76
NME3-205ENST00000563854 NLRP4Q96MN2 994 aa19.82■□□□□ 0.76
NME3-205ENST00000563854 AAASQ9NRG9 546 aa19.82■□□□□ 0.76
NME3-205ENST00000563854 PCDHB12Q9Y5F1 795 aa19.82■□□□□ 0.76
NME3-205ENST00000563854 FNDC1Q4ZHG4 1894 aaPredicted RBP19.82■□□□□ 0.76
NME3-205ENST00000563854 BRWD1Q9NSI6 2320 aa19.81■□□□□ 0.76
NME3-205ENST00000563854 A0A087WZ62 844 aa19.81■□□□□ 0.76
NME3-205ENST00000563854 BTBD18B2RXH4 712 aa19.81■□□□□ 0.76
NME3-205ENST00000563854 TBX3O15119 743 aa19.81■□□□□ 0.76
NME3-205ENST00000563854 DKC1O60832 514 aaKnown RBP eCLIP19.81■□□□□ 0.76
NME3-205ENST00000563854 P4HBP07237 508 aaKnown RBP19.81■□□□□ 0.76
NME3-205ENST00000563854 GTF2F1P35269 517 aaKnown RBP eCLIP19.81■□□□□ 0.764e-7■■■□□ 18.9
NME3-205ENST00000563854 CYP4A11Q02928 519 aa19.81■□□□□ 0.76
NME3-205ENST00000563854 NAALADL2Q58DX5 795 aa19.81■□□□□ 0.76
NME3-205ENST00000563854 DIS3L2Q8IYB7 885 aaKnown RBP19.81■□□□□ 0.76
NME3-205ENST00000563854 THNSL1Q8IYQ7 743 aa19.81■□□□□ 0.76
NME3-205ENST00000563854 SPPL3Q8TCT6 385 aa19.81■□□□□ 0.76
NME3-205ENST00000563854 TNFRSF25Q93038 417 aa19.81■□□□□ 0.76
NME3-205ENST00000563854 CEP170P1Q96L14 293 aa19.81■□□□□ 0.76
NME3-205ENST00000563854 CEP89Q96ST8 783 aa19.81■□□□□ 0.76
NME3-205ENST00000563854 FDXACB1Q9BRP7 624 aaPredicted RBP19.81■□□□□ 0.76
NME3-205ENST00000563854 LXNQ9BS40 222 aa19.81■□□□□ 0.76
NME3-205ENST00000563854 ELAC1Q9H777 363 aaKnown RBP19.81■□□□□ 0.76
NME3-205ENST00000563854 CYP26B1Q9NR63 512 aa19.81■□□□□ 0.76
NME3-205ENST00000563854 TYW1Q9NV66 732 aaKnown RBP19.81■□□□□ 0.76
NME3-205ENST00000563854 WRAP73Q9P2S5 460 aaPredicted RBP19.81■□□□□ 0.76
NME3-205ENST00000563854 MAFO75444 373 aaPredicted RBP19.8■□□□□ 0.76
NME3-205ENST00000563854 IRS1P35568 1242 aa19.8■□□□□ 0.76
NME3-205ENST00000563854 POLGP54098 1239 aaPredicted RBP19.8■□□□□ 0.76
NME3-205ENST00000563854 GUCY1B3Q02153 619 aa19.8■□□□□ 0.76
NME3-205ENST00000563854 ST3GAL1Q11201 340 aa19.8■□□□□ 0.76
NME3-205ENST00000563854 CAMK1Q14012 370 aa19.8■□□□□ 0.76
NME3-205ENST00000563854 ECHDC2Q86YB7 292 aa19.8■□□□□ 0.76
NME3-205ENST00000563854 KSR1Q8IVT5 923 aa19.8■□□□□ 0.76
NME3-205ENST00000563854 CCDC83Q8IWF9 413 aa19.8■□□□□ 0.76
NME3-205ENST00000563854 SLFN12Q8IYM2 578 aa19.8■□□□□ 0.76
NME3-205ENST00000563854 COLGALT1Q8NBJ5 622 aa19.8■□□□□ 0.76
NME3-205ENST00000563854 NEK9Q8TD19 979 aa19.8■□□□□ 0.76
NME3-205ENST00000563854 SLC7A3Q8WY07 619 aa19.8■□□□□ 0.76
NME3-205ENST00000563854 PPP2R3CQ969Q6 453 aa19.8■□□□□ 0.76
NME3-205ENST00000563854 DYDC2Q96IM9 177 aa19.8■□□□□ 0.76
NME3-205ENST00000563854 JPH2Q9BR39 696 aaPredicted RBP19.8■□□□□ 0.76
NME3-205ENST00000563854 RGL1Q9NZL6 768 aa19.8■□□□□ 0.76
NME3-205ENST00000563854 PCDHGC5Q9Y5F6 944 aa19.8■□□□□ 0.76
NME3-205ENST00000563854 IGKV6-21A0A0C4DH24 114 aa19.79■□□□□ 0.76
NME3-205ENST00000563854 LINC01565O15544 149 aa19.79■□□□□ 0.76
NME3-205ENST00000563854 HOXA2O43364 376 aa19.79■□□□□ 0.76
NME3-205ENST00000563854 SFPQP23246 707 aaKnown RBP eCLIP19.79■□□□□ 0.76
NME3-205ENST00000563854 SSTR3P32745 418 aaPredicted RBP19.79■□□□□ 0.76
NME3-205ENST00000563854 FAM189BP81408 668 aa19.79■□□□□ 0.76
NME3-205ENST00000563854 CTTNQ14247 550 aaKnown RBP19.79■□□□□ 0.76
NME3-205ENST00000563854 EPHA7Q15375 998 aa19.79■□□□□ 0.76
NME3-205ENST00000563854 CALCRLQ16602 461 aa19.79■□□□□ 0.76
NME3-205ENST00000563854 ADGRD2Q7Z7M1 963 aa19.79■□□□□ 0.76
NME3-205ENST00000563854 RBM23Q86U06 439 aaKnown RBP19.79■□□□□ 0.76
NME3-205ENST00000563854 ZNF579Q8NAF0 562 aaKnown RBP19.79■□□□□ 0.76
NME3-205ENST00000563854 MICAL1Q8TDZ2 1067 aa19.79■□□□□ 0.76
NME3-205ENST00000563854 TMEM117Q9H0C3 514 aa19.79■□□□□ 0.76
NME3-205ENST00000563854 PLXNA4Q9HCM2 1894 aa19.79■□□□□ 0.76
NME3-205ENST00000563854 NCOR1O75376 2440 aa19.78■□□□□ 0.76
NME3-205ENST00000563854 NCK2O43639 380 aa19.78■□□□□ 0.76
NME3-205ENST00000563854 FGF18O76093 207 aa19.78■□□□□ 0.76
NME3-205ENST00000563854 LAG3P18627 525 aa19.78■□□□□ 0.76
NME3-205ENST00000563854 ATP2B1P20020 1258 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms