RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 TMEM240Q5SV17 173 aa5.25□□□□□ -1.57
SMG1-207ENST00000563235 MCTP2Q6DN12 878 aa5.25□□□□□ -1.57
SMG1-207ENST00000563235 TMEM132EQ6IEE7 984 aa5.25□□□□□ -1.57
SMG1-207ENST00000563235 JMJD6Q6NYC1 403 aaPredicted RBP5.25□□□□□ -1.57
SMG1-207ENST00000563235 PLEKHM3Q6ZWE6 761 aa5.25□□□□□ -1.57
SMG1-207ENST00000563235 RPAP2Q8IXW5 612 aaPredicted RBP5.25□□□□□ -1.57
SMG1-207ENST00000563235 NANOS1Q8WY41 292 aaKnown RBP5.25□□□□□ -1.57
SMG1-207ENST00000563235 KRT35Q92764 455 aa5.25□□□□□ -1.57
SMG1-207ENST00000563235 RILPL2Q969X0 211 aa5.25□□□□□ -1.57
SMG1-207ENST00000563235 SLC26A8Q96RN1 970 aa5.25□□□□□ -1.57
SMG1-207ENST00000563235 WNT5BQ9H1J7 359 aa5.25□□□□□ -1.57
SMG1-207ENST00000563235 CCDC177Q9NQR7 707 aaPredicted RBP5.25□□□□□ -1.57
SMG1-207ENST00000563235 INTS7Q9NVH2 962 aaKnown RBP5.25□□□□□ -1.57
SMG1-207ENST00000563235 PCOLCE2Q9UKZ9 415 aa5.25□□□□□ -1.57
SMG1-207ENST00000563235 PCDHGB2Q9Y5G2 931 aa5.25□□□□□ -1.57
SMG1-207ENST00000563235 USP19O94966 1318 aa5.25□□□□□ -1.57
SMG1-207ENST00000563235 CPS1P31327 1500 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 ZMYM4Q5VZL5 1548 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 A0A087X0M5 115 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 A0A1B0GX30 115 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 POLR3GO15318 223 aaPredicted RBP5.24□□□□□ -1.57
SMG1-207ENST00000563235 TBCAO75347 108 aaKnown RBP5.24□□□□□ -1.57
SMG1-207ENST00000563235 ZBED1O96006 694 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 SLC10A3P09131 477 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 ARAFP10398 606 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 NR2C2P49116 596 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 CNGA3Q16281 694 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 CLPPQ16740 277 aaPredicted RBP5.24□□□□□ -1.57
SMG1-207ENST00000563235 KRT222Q8N1A0 295 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 C7orf57Q8NEG2 295 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 OTUD7AQ8TE49 926 aaPredicted RBP5.24□□□□□ -1.57
SMG1-207ENST00000563235 DHTKD1Q96HY7 919 aaPredicted RBP5.24□□□□□ -1.57
SMG1-207ENST00000563235 ZSCAN31Q96LW9 406 aaPredicted RBP5.24□□□□□ -1.57
SMG1-207ENST00000563235 GAS2L1Q99501 681 aaPredicted RBP5.24□□□□□ -1.57
SMG1-207ENST00000563235 TSEN34Q9BSV6 310 aaKnown RBP5.24□□□□□ -1.57
SMG1-207ENST00000563235 IFT22Q9H7X7 185 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 DKK3Q9UBP4 350 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 PNMA3Q9UL41 463 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 ADAMTS8Q9UP79 889 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 SPAG9O60271 1321 aaKnown RBP5.24□□□□□ -1.57
SMG1-207ENST00000563235 LTBP3Q9NS15 1303 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 ATAD2Q6PL18 1390 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 RGSL1A5PLK6 1076 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 PLSCR1O15162 318 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 TXNL1O43396 289 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 BPIP17213 487 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 AFF3P51826 1226 aaKnown RBP5.24□□□□□ -1.57
SMG1-207ENST00000563235 GTF2A1P52655 376 aaPredicted RBP5.24□□□□□ -1.57
SMG1-207ENST00000563235 STXBP5Q5T5C0 1151 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 TTBK2Q6IQ55 1244 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 IL27RAQ6UWB1 636 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.24□□□□□ -1.57
SMG1-207ENST00000563235 SPC24Q8NBT2 197 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 USP7Q93009 1102 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 NAF1Q96HR8 494 aaKnown RBP5.24□□□□□ -1.57
SMG1-207ENST00000563235 C8orf76Q96K31 380 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 WASH6PQ9NQA3 447 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.24□□□□□ -1.57
SMG1-207ENST00000563235 CALCOCO1Q9P1Z2 691 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 ADD3Q9UEY8 706 aaKnown RBP5.24□□□□□ -1.57
SMG1-207ENST00000563235 VPS28Q9UK41 221 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 EXOC7Q9UPT5 735 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 SETD1AO15047 1707 aaKnown RBP5.24□□□□□ -1.57
SMG1-207ENST00000563235 ARHGAP10A1A4S6 786 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 KRT87PA6NCN2 255 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 CEP104O60308 925 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 HNRNPLP14866 589 aaKnown RBP eCLIP5.24□□□□□ -1.57
SMG1-207ENST00000563235 PORP16435 677 aaPredicted RBP5.24□□□□□ -1.57
SMG1-207ENST00000563235 PEX5P50542 639 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 ACY1Q03154 408 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 NFKBIBQ15653 356 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 CCDC152Q4G0S7 254 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 SLC22A25Q6T423 547 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 ANGPTL8Q6UXH0 198 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 LBX2Q6XYB7 198 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 ZNF783Q6ZMS7 281 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 RGS9BPQ6ZS82 235 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 ATG9AQ7Z3C6 839 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 SYTL1Q8IYJ3 562 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 FAM9CQ8IZT9 166 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 CCAR2Q8N163 923 aaKnown RBP5.24□□□□□ -1.57
SMG1-207ENST00000563235 TRIML2Q8N7C3 387 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 GALNT6Q8NCL4 622 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 C3orf58Q8NDZ4 430 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 C1orf162Q8NEQ5 155 aaPredicted RBP5.24□□□□□ -1.57
SMG1-207ENST00000563235 ADAM32Q8TC27 787 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 VPS39Q96JC1 886 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 PPP1R13BQ96KQ4 1090 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 SPATA17Q96L03 361 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 DACH2Q96NX9 599 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 HERC2P3Q9BVR0 1158 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 MXD3Q9BW11 206 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 TRIM39Q9HCM9 518 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 INTS10Q9NVR2 710 aaKnown RBP5.24□□□□□ -1.57
SMG1-207ENST00000563235 AKAP7Q9P0M2 348 aaPredicted RBP5.24□□□□□ -1.57
SMG1-207ENST00000563235 STK39Q9UEW8 545 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 TRAF3IP3Q9Y228 551 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 AP1M2Q9Y6Q5 423 aa5.24□□□□□ -1.57
SMG1-207ENST00000563235 RRBP1Q9P2E9 1410 aaKnown RBP5.23□□□□□ -1.57
SMG1-207ENST00000563235 DDHD2O94830 711 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms