RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 MCPH1Q8NEM0 835 aa19.85■□□□□ 0.77
COMMD4-208ENST00000563220 HHIPL1Q96JK4 782 aa19.85■□□□□ 0.77
COMMD4-208ENST00000563220 TMX1Q9H3N1 280 aa19.85■□□□□ 0.77
COMMD4-208ENST00000563220 DHX33Q9H6R0 707 aaKnown RBP19.85■□□□□ 0.77
COMMD4-208ENST00000563220 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.84■□□□□ 0.77
COMMD4-208ENST00000563220 RNF225M0QZC1 329 aaPredicted RBP19.84■□□□□ 0.77
COMMD4-208ENST00000563220 MAP2K5Q13163 448 aa19.84■□□□□ 0.77
COMMD4-208ENST00000563220 CYP4F22Q6NT55 531 aa19.84■□□□□ 0.77
COMMD4-208ENST00000563220 PPFIBP1Q86W92 1011 aa19.84■□□□□ 0.77
COMMD4-208ENST00000563220 TRIM59Q8IWR1 403 aa19.84■□□□□ 0.77
COMMD4-208ENST00000563220 GLG1Q92896 1179 aa19.84■□□□□ 0.77
COMMD4-208ENST00000563220 NTPCRQ9BSD7 190 aaKnown RBP19.84■□□□□ 0.77
COMMD4-208ENST00000563220 GBP3Q9H0R5 595 aa19.84■□□□□ 0.77
COMMD4-208ENST00000563220 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.84■□□□□ 0.77
COMMD4-208ENST00000563220 RASSF10A6NK89 507 aa19.84■□□□□ 0.77
COMMD4-208ENST00000563220 AKR1B15C9JRZ8 316 aaPredicted RBP19.84■□□□□ 0.77
COMMD4-208ENST00000563220 AKAP3O75969 853 aa19.84■□□□□ 0.77
COMMD4-208ENST00000563220 MARK3P27448 753 aa19.84■□□□□ 0.77
COMMD4-208ENST00000563220 CASP14P31944 242 aa19.84■□□□□ 0.77
COMMD4-208ENST00000563220 CASP4P49662 377 aa19.84■□□□□ 0.77
COMMD4-208ENST00000563220 FXR1P51114 621 aaKnown RBP eCLIP19.84■□□□□ 0.77
COMMD4-208ENST00000563220 POLGP54098 1239 aaPredicted RBP19.84■□□□□ 0.77
COMMD4-208ENST00000563220 ALCAMQ13740 583 aa19.84■□□□□ 0.77
COMMD4-208ENST00000563220 EMC2Q15006 297 aa19.84■□□□□ 0.77
COMMD4-208ENST00000563220 NFIL3Q16649 462 aa19.84■□□□□ 0.77
COMMD4-208ENST00000563220 PLPPR4Q7Z2D5 763 aa19.84■□□□□ 0.77
COMMD4-208ENST00000563220 TMEM161BQ8NDZ6 487 aa19.84■□□□□ 0.77
COMMD4-208ENST00000563220 KIFC3Q9BVG8 833 aa19.84■□□□□ 0.77
COMMD4-208ENST00000563220 C17orf75Q9HAS0 396 aa19.84■□□□□ 0.77
COMMD4-208ENST00000563220 AGPAT3Q9NRZ7 376 aa19.84■□□□□ 0.77
COMMD4-208ENST00000563220 CCDC169A6NNP5 214 aa19.83■□□□□ 0.76
COMMD4-208ENST00000563220 TOMM70O94826 608 aa19.83■□□□□ 0.76
COMMD4-208ENST00000563220 RPL13P26373 211 aaKnown RBP19.83■□□□□ 0.76
COMMD4-208ENST00000563220 KLK7P49862 253 aa19.83■□□□□ 0.76
COMMD4-208ENST00000563220 DMP1Q13316 513 aaPredicted RBP19.83■□□□□ 0.76
COMMD4-208ENST00000563220 ACVR2BQ13705 512 aa19.83■□□□□ 0.76
COMMD4-208ENST00000563220 LAMC2Q13753 1193 aa19.83■□□□□ 0.76
COMMD4-208ENST00000563220 SYCP1Q15431 976 aa19.83■□□□□ 0.76
COMMD4-208ENST00000563220 SYCP3Q8IZU3 236 aa19.83■□□□□ 0.76
COMMD4-208ENST00000563220 SPIRE2Q8WWL2 714 aa19.83■□□□□ 0.76
COMMD4-208ENST00000563220 USP6NLQ92738 828 aa19.83■□□□□ 0.76
COMMD4-208ENST00000563220 ACCSQ96QU6 501 aa19.83■□□□□ 0.76
COMMD4-208ENST00000563220 POLR3FQ9H1D9 316 aaPredicted RBP19.83■□□□□ 0.76
COMMD4-208ENST00000563220 DMAC2Q9NW81 257 aa19.83■□□□□ 0.76
COMMD4-208ENST00000563220 SLC5A4Q9NY91 659 aa19.83■□□□□ 0.76
COMMD4-208ENST00000563220 PLXNA1Q9UIW2 1896 aa19.83■□□□□ 0.76
COMMD4-208ENST00000563220 GH1P01241 217 aa19.82■□□□□ 0.76
COMMD4-208ENST00000563220 SMTNP53814 917 aa19.82■□□□□ 0.76
COMMD4-208ENST00000563220 RTP1P59025 263 aa19.82■□□□□ 0.76
COMMD4-208ENST00000563220 PAXIP1Q6ZW49 1069 aaPredicted RBP19.82■□□□□ 0.76
COMMD4-208ENST00000563220 HS2ST1Q7LGA3 356 aa19.82■□□□□ 0.76
COMMD4-208ENST00000563220 TMEM139Q8IV31 216 aa19.82■□□□□ 0.76
COMMD4-208ENST00000563220 TMEM143Q96AN5 459 aa19.82■□□□□ 0.76
COMMD4-208ENST00000563220 ERGIC2Q96RQ1 377 aa19.82■□□□□ 0.76
COMMD4-208ENST00000563220 ABHD16BQ9H3Z7 469 aa19.82■□□□□ 0.76
COMMD4-208ENST00000563220 TMEM206Q9H813 350 aa19.82■□□□□ 0.76
COMMD4-208ENST00000563220 FLRT1Q9NZU1 646 aa19.82■□□□□ 0.76
COMMD4-208ENST00000563220 EMSYQ7Z589 1322 aa19.82■□□□□ 0.76
COMMD4-208ENST00000563220 SMPD1P17405 629 aa19.82■□□□□ 0.76
COMMD4-208ENST00000563220 NOLC1Q14978 699 aaKnown RBP eCLIP19.82■□□□□ 0.76
COMMD4-208ENST00000563220 PLCB4Q15147 1175 aa19.82■□□□□ 0.76
COMMD4-208ENST00000563220 FKBP15Q5T1M5 1219 aa19.82■□□□□ 0.76
COMMD4-208ENST00000563220 FRMD5Q7Z6J6 570 aa19.82■□□□□ 0.76
COMMD4-208ENST00000563220 CCDC155Q8N6L0 562 aa19.82■□□□□ 0.76
COMMD4-208ENST00000563220 SLC17A8Q8NDX2 589 aa19.82■□□□□ 0.76
COMMD4-208ENST00000563220 BBXQ8WY36 941 aaPredicted RBP19.82■□□□□ 0.76
COMMD4-208ENST00000563220 FAM167AQ96KS9 214 aa19.82■□□□□ 0.76
COMMD4-208ENST00000563220 KMT5AQ9NQR1 393 aa19.82■□□□□ 0.76
COMMD4-208ENST00000563220 ZHX1Q9UKY1 873 aaPredicted RBP19.82■□□□□ 0.76
COMMD4-208ENST00000563220 TISP43B9A030 160 aa19.81■□□□□ 0.76
COMMD4-208ENST00000563220 CA12O43570 354 aa19.81■□□□□ 0.76
COMMD4-208ENST00000563220 MFAP3LO75121 409 aa19.81■□□□□ 0.76
COMMD4-208ENST00000563220 HOXC6P09630 235 aa19.81■□□□□ 0.76
COMMD4-208ENST00000563220 MSL3Q8N5Y2 521 aaKnown RBP19.81■□□□□ 0.76
COMMD4-208ENST00000563220 ATP8B4Q8TF62 1192 aa19.81■□□□□ 0.76
COMMD4-208ENST00000563220 SMARCAD1Q9H4L7 1026 aa19.81■□□□□ 0.76
COMMD4-208ENST00000563220 GJD2Q9UKL4 321 aa19.81■□□□□ 0.76
COMMD4-208ENST00000563220 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.81■□□□□ 0.76
COMMD4-208ENST00000563220 MYH9P35579 1960 aaKnown RBP19.81■□□□□ 0.76
COMMD4-208ENST00000563220 ADGRA3Q8IWK6 1321 aa19.81■□□□□ 0.76
COMMD4-208ENST00000563220 MYH11P35749 1972 aa19.8■□□□□ 0.76
COMMD4-208ENST00000563220 ZBTB42B2RXF5 422 aa19.8■□□□□ 0.76
COMMD4-208ENST00000563220 SLC16A3O15427 465 aaKnown RBP19.8■□□□□ 0.76
COMMD4-208ENST00000563220 CTGFP29279 349 aa19.8■□□□□ 0.76
COMMD4-208ENST00000563220 ARL2P36404 184 aa19.8■□□□□ 0.76
COMMD4-208ENST00000563220 PRAMEF19Q5SWL8 479 aa19.8■□□□□ 0.76
COMMD4-208ENST00000563220 GOLGA5Q8TBA6 731 aa19.8■□□□□ 0.76
COMMD4-208ENST00000563220 ASAP3Q8TDY4 903 aa19.8■□□□□ 0.76
COMMD4-208ENST00000563220 AFG1LQ8WV93 481 aa19.8■□□□□ 0.76
COMMD4-208ENST00000563220 SLC7A3Q8WY07 619 aa19.8■□□□□ 0.76
COMMD4-208ENST00000563220 EMID1Q96A84 441 aaPredicted RBP19.8■□□□□ 0.76
COMMD4-208ENST00000563220 BORCS6Q96GS4 357 aa19.8■□□□□ 0.76
COMMD4-208ENST00000563220 ARMCX3Q9UH62 379 aaPredicted RBP19.8■□□□□ 0.76
COMMD4-208ENST00000563220 TBX20Q9UMR3 447 aa19.8■□□□□ 0.76
COMMD4-208ENST00000563220 SIK3Q9Y2K2 1263 aa19.8■□□□□ 0.76
COMMD4-208ENST00000563220 TTC26A0AVF1 554 aa19.79■□□□□ 0.76
COMMD4-208ENST00000563220 DENND3A2RUS2 1198 aa19.79■□□□□ 0.76
COMMD4-208ENST00000563220 MAFO75444 373 aaPredicted RBP19.79■□□□□ 0.76
COMMD4-208ENST00000563220 RFC5P40937 340 aa19.79■□□□□ 0.76
COMMD4-208ENST00000563220 TRIM14Q14142 442 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms