RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 SLFN14P0C7P3 912 aa20.87■□□□□ 0.93
RAB40C-207ENST00000563109 CKBP12277 381 aa20.87■□□□□ 0.93
RAB40C-207ENST00000563109 RAG1P15918 1043 aa20.87■□□□□ 0.93
RAB40C-207ENST00000563109 SELPP16109 830 aa20.87■□□□□ 0.93
RAB40C-207ENST00000563109 RGS19P49795 217 aa20.87■□□□□ 0.93
RAB40C-207ENST00000563109 CDC42EP1Q00587 391 aa20.87■□□□□ 0.93
RAB40C-207ENST00000563109 LRRC8DQ7L1W4 858 aa20.87■□□□□ 0.93
RAB40C-207ENST00000563109 SH3RF1Q7Z6J0 888 aa20.87■□□□□ 0.93
RAB40C-207ENST00000563109 CNNM3Q8NE01 707 aa20.87■□□□□ 0.93
RAB40C-207ENST00000563109 KIFAP3Q92845 792 aa20.87■□□□□ 0.93
RAB40C-207ENST00000563109 SERTAD1Q9UHV2 236 aa20.87■□□□□ 0.93
RAB40C-207ENST00000563109 TRPV2Q9Y5S1 764 aa20.87■□□□□ 0.93
RAB40C-207ENST00000563109 ASAP2O43150 1006 aa20.86■□□□□ 0.93
RAB40C-207ENST00000563109 ACTN4O43707 911 aaKnown RBP20.86■□□□□ 0.93
RAB40C-207ENST00000563109 HIP1RO75146 1068 aa20.86■□□□□ 0.93
RAB40C-207ENST00000563109 TBCAO75347 108 aaKnown RBP20.86■□□□□ 0.93
RAB40C-207ENST00000563109 ZNF202O95125 648 aa20.86■□□□□ 0.93
RAB40C-207ENST00000563109 TMEM62Q0P6H9 643 aa20.86■□□□□ 0.93
RAB40C-207ENST00000563109 MKRN4PQ13434 485 aaPredicted RBP20.86■□□□□ 0.93
RAB40C-207ENST00000563109 DRP2Q13474 957 aa20.86■□□□□ 0.93
RAB40C-207ENST00000563109 MXD4Q14582 209 aaPredicted RBP20.86■□□□□ 0.93
RAB40C-207ENST00000563109 RHPN2Q8IUC4 686 aa20.86■□□□□ 0.93
RAB40C-207ENST00000563109 ODF2LQ9ULJ1 636 aa20.86■□□□□ 0.93
RAB40C-207ENST00000563109 COL4A3BPQ9Y5P4 624 aa20.86■□□□□ 0.93
RAB40C-207ENST00000563109 CDY2AQ9Y6F7 541 aa20.86■□□□□ 0.93
RAB40C-207ENST00000563109 SIP14410 1827 aa20.85■□□□□ 0.93
RAB40C-207ENST00000563109 LTBP2Q14767 1821 aa20.85■□□□□ 0.93
RAB40C-207ENST00000563109 TRIM43BA6NCK2 446 aa20.85■□□□□ 0.93
RAB40C-207ENST00000563109 RSPH10B2B2RC85 870 aa20.85■□□□□ 0.93
RAB40C-207ENST00000563109 KINO60870 393 aaKnown RBP20.85■□□□□ 0.93
RAB40C-207ENST00000563109 TIMP1P01033 207 aa20.85■□□□□ 0.93
RAB40C-207ENST00000563109 RSPH10BP0C881 870 aa20.85■□□□□ 0.93
RAB40C-207ENST00000563109 RAD51AP2Q09MP3 1159 aa20.85■□□□□ 0.93
RAB40C-207ENST00000563109 TFDP1Q14186 410 aa20.85■□□□□ 0.93
RAB40C-207ENST00000563109 PPP2R5AQ15172 486 aa20.85■□□□□ 0.93
RAB40C-207ENST00000563109 LONRF3Q496Y0 759 aa20.85■□□□□ 0.93
RAB40C-207ENST00000563109 ZNF618Q5T7W0 954 aa20.85■□□□□ 0.93
RAB40C-207ENST00000563109 FMR1NBQ8N0W7 255 aaPredicted RBP20.85■□□□□ 0.93
RAB40C-207ENST00000563109 PRPF31Q8WWY3 499 aaKnown RBP20.85■□□□□ 0.93
RAB40C-207ENST00000563109 NLRP7Q8WX94 980 aa20.85■□□□□ 0.93
RAB40C-207ENST00000563109 TRIM43Q96BQ3 446 aaPredicted RBP20.85■□□□□ 0.93
RAB40C-207ENST00000563109 IFT74Q96LB3 600 aa20.85■□□□□ 0.93
RAB40C-207ENST00000563109 NLRP4Q96MN2 994 aa20.85■□□□□ 0.93
RAB40C-207ENST00000563109 PPP1R16BQ96T49 567 aa20.85■□□□□ 0.93
RAB40C-207ENST00000563109 GPRC5CQ9NQ84 441 aa20.85■□□□□ 0.93
RAB40C-207ENST00000563109 KBTBD4Q9NVX7 518 aa20.85■□□□□ 0.93
RAB40C-207ENST00000563109 GINS2Q9Y248 185 aa20.85■□□□□ 0.93
RAB40C-207ENST00000563109 MYMKA6NI61 221 aa20.84■□□□□ 0.93
RAB40C-207ENST00000563109 FAM13AO94988 1023 aa20.84■□□□□ 0.93
RAB40C-207ENST00000563109 PARNO95453 639 aaKnown RBP20.84■□□□□ 0.93
RAB40C-207ENST00000563109 CYP2C18P33260 490 aa20.84■□□□□ 0.93
RAB40C-207ENST00000563109 ARL2P36404 184 aa20.84■□□□□ 0.93
RAB40C-207ENST00000563109 GPC3P51654 580 aa20.84■□□□□ 0.93
RAB40C-207ENST00000563109 NLRP11P59045 1033 aaKnown RBP20.84■□□□□ 0.93
RAB40C-207ENST00000563109 LAMTOR4Q0VGL1 99 aa20.84■□□□□ 0.93
RAB40C-207ENST00000563109 KIZQ2M2Z5 673 aa20.84■□□□□ 0.93
RAB40C-207ENST00000563109 ARSHQ5FYA8 562 aa20.84■□□□□ 0.93
RAB40C-207ENST00000563109 FAM26DQ5JW98 314 aa20.84■□□□□ 0.93
RAB40C-207ENST00000563109 KANK3Q6NY19 840 aa20.84■□□□□ 0.93
RAB40C-207ENST00000563109 KRBA2Q6ZNG9 492 aa20.84■□□□□ 0.93
RAB40C-207ENST00000563109 ZNF410Q86VK4 478 aa20.84■□□□□ 0.93
RAB40C-207ENST00000563109 DDX12PQ92771 950 aa20.84■□□□□ 0.93
RAB40C-207ENST00000563109 REEP2Q9BRK0 252 aa20.84■□□□□ 0.93
RAB40C-207ENST00000563109 CELF4Q9BZC1 486 aaKnown RBP20.84■□□□□ 0.93
RAB40C-207ENST00000563109 LMBRD1Q9NUN5 540 aa20.84■□□□□ 0.93
RAB40C-207ENST00000563109 ZMYND8Q9ULU4 1186 aaPredicted RBP20.84■□□□□ 0.93
RAB40C-207ENST00000563109 UMODL1Q5DID0 1318 aa20.83■□□□□ 0.93
RAB40C-207ENST00000563109 NPHP3-ACAD11A0A0J9YXS1 232 aa20.83■□□□□ 0.93
RAB40C-207ENST00000563109 LIG1P18858 919 aa20.83■□□□□ 0.93
RAB40C-207ENST00000563109 AFMP43652 599 aa20.83■□□□□ 0.93
RAB40C-207ENST00000563109 CCL23P55773 120 aa20.83■□□□□ 0.93
RAB40C-207ENST00000563109 CACNB1Q02641 598 aaPredicted RBP20.83■□□□□ 0.93
RAB40C-207ENST00000563109 MGAT3Q09327 533 aa20.83■□□□□ 0.93
RAB40C-207ENST00000563109 DYMQ7RTS9 669 aa20.83■□□□□ 0.93
RAB40C-207ENST00000563109 TMEM199Q8N511 208 aa20.83■□□□□ 0.93
RAB40C-207ENST00000563109 ENGASEQ8NFI3 743 aa20.83■□□□□ 0.93
RAB40C-207ENST00000563109 ASAP3Q8TDY4 903 aa20.83■□□□□ 0.93
RAB40C-207ENST00000563109 STAMQ92783 540 aa20.83■□□□□ 0.93
RAB40C-207ENST00000563109 ZHX3Q9H4I2 956 aa20.83■□□□□ 0.93
RAB40C-207ENST00000563109 C17orf75Q9HAS0 396 aa20.83■□□□□ 0.93
RAB40C-207ENST00000563109 HOOK1Q9UJC3 728 aaKnown RBP20.83■□□□□ 0.93
RAB40C-207ENST00000563109 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.82■□□□□ 0.92
RAB40C-207ENST00000563109 NR1I2O75469 434 aa20.82■□□□□ 0.92
RAB40C-207ENST00000563109 IQCF3P0C7M6 154 aa20.82■□□□□ 0.92
RAB40C-207ENST00000563109 SYN1P17600 705 aa20.82■□□□□ 0.92
RAB40C-207ENST00000563109 GLRA2P23416 452 aa20.82■□□□□ 0.92
RAB40C-207ENST00000563109 RFC2P35250 354 aa20.82■□□□□ 0.92
RAB40C-207ENST00000563109 PHKA2P46019 1235 aa20.82■□□□□ 0.92
RAB40C-207ENST00000563109 CRYBB1P53674 252 aaPredicted RBP20.82■□□□□ 0.92
RAB40C-207ENST00000563109 ASIC1P78348 528 aa20.82■□□□□ 0.92
RAB40C-207ENST00000563109 DMP1Q13316 513 aaPredicted RBP20.82■□□□□ 0.92
RAB40C-207ENST00000563109 GIT2Q14161 759 aa20.82■□□□□ 0.92
RAB40C-207ENST00000563109 RNF149Q8NC42 400 aa20.82■□□□□ 0.92
RAB40C-207ENST00000563109 PAGE5Q96GU1 130 aa20.82■□□□□ 0.92
RAB40C-207ENST00000563109 TIGD1Q96MW7 591 aa20.82■□□□□ 0.92
RAB40C-207ENST00000563109 OSMRQ99650 979 aa20.82■□□□□ 0.92
RAB40C-207ENST00000563109 LBHD1Q9BQE6 289 aaPredicted RBP20.82■□□□□ 0.92
RAB40C-207ENST00000563109 GCOM2Q9BZD3 368 aaPredicted RBP20.82■□□□□ 0.92
RAB40C-207ENST00000563109 TRIM9Q9C026 710 aa20.82■□□□□ 0.92
RAB40C-207ENST00000563109 WNT8AQ9H1J5 351 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms